BLASTX nr result

ID: Coptis24_contig00006634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006634
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545428.1| PREDICTED: F-box protein At2g32560-like [Gly...   102   3e-20
ref|XP_003556934.1| PREDICTED: F-box protein At2g32560-like [Gly...   100   2e-19
ref|XP_003519507.1| PREDICTED: F-box protein At2g32560-like [Gly...    99   5e-19
ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    98   6e-19
ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isof...    98   6e-19

>ref|XP_003545428.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 397

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = +3

Query: 3   VENVEDIIETYLLDLPESALECILEKLQPIDLCKVAEVCKPLRDGWWSDYLWERHMKKKG 182
           VEN+ED  +  +LDLPE  LECILEKL P  LC++A VC+ LR+   SD+LWERHMK+K 
Sbjct: 76  VENIEDSQDMSVLDLPELVLECILEKLPPASLCQMAGVCRSLRESCVSDHLWERHMKQKW 135

Query: 183 VGVIGQAAYREWKW 224
             +IGQAAYREWKW
Sbjct: 136 GRIIGQAAYREWKW 149


>ref|XP_003556934.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 399

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/74 (60%), Positives = 58/74 (78%)
 Frame = +3

Query: 3   VENVEDIIETYLLDLPESALECILEKLQPIDLCKVAEVCKPLRDGWWSDYLWERHMKKKG 182
           VENVE+ ++  +LDLPE AL+CILE+L P  LC++A VC+ LR+   SD+LWE+HM+KK 
Sbjct: 77  VENVEESLDMSVLDLPELALDCILERLPPSSLCRIAAVCRTLRERCVSDHLWEKHMRKKW 136

Query: 183 VGVIGQAAYREWKW 224
             VIG AAYREWKW
Sbjct: 137 GRVIGPAAYREWKW 150


>ref|XP_003519507.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 397

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/74 (63%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   VENVEDIIETYLLDLPESALECILEKLQPIDLCKVAEVCKPLRDGWWSDYLWERHMKKKG 182
           VE +ED  +  +LDLPE  LECILEKL P  LC++A VC+ LR+   SD+LWERHMK+K 
Sbjct: 76  VEIIEDSQDMSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKW 135

Query: 183 VGVIGQAAYREWKW 224
             VIGQAAYREWKW
Sbjct: 136 GRVIGQAAYREWKW 149


>ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g32560-like
           [Cucumis sativus]
          Length = 369

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/74 (64%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   VENVEDIIETYLLDLPESALECILEKLQPIDLCKVAEVCKPLRDGWWSDYLWERHMKKKG 182
           VENVE+  E  +LDLPE ALECILEKL P  LC +A VC  LR+   SD+LWE+HMK+K 
Sbjct: 76  VENVEESGEMSVLDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRKW 135

Query: 183 VGVIGQAAYREWKW 224
             VIGQAAYREW+W
Sbjct: 136 GKVIGQAAYREWQW 149


>ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isoform 1 [Cucumis sativus]
          Length = 396

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/74 (64%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   VENVEDIIETYLLDLPESALECILEKLQPIDLCKVAEVCKPLRDGWWSDYLWERHMKKKG 182
           VENVE+  E  +LDLPE ALECILEKL P  LC +A VC  LR+   SD+LWE+HMK+K 
Sbjct: 76  VENVEESGEMSVLDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRKW 135

Query: 183 VGVIGQAAYREWKW 224
             VIGQAAYREW+W
Sbjct: 136 GKVIGQAAYREWQW 149


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