BLASTX nr result

ID: Coptis24_contig00006625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006625
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]      390   e-106
ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis] g...   381   e-103
ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243...   377   e-102
ref|XP_002311733.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_004151464.1| PREDICTED: probable cytokinin riboside 5'-mo...   369   e-100

>emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]
          Length = 305

 Score =  390 bits (1001), Expect = e-106
 Identities = 193/277 (69%), Positives = 219/277 (79%), Gaps = 10/277 (3%)
 Frame = -1

Query: 1213 LNNSHQKNSM--KKMDKQTSKFKFLKPR-----GRVFMCKSE---FEERTSPDEVKKEIQ 1064
            L +SHQK  M    + K+T +F    P+        F CKSE   FEERTSP EVKKEI 
Sbjct: 18   LRSSHQKEVMLGSCLRKETWRFNLNLPKLNYQSRNSFCCKSESIDFEERTSPYEVKKEID 77

Query: 1063 NCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTTWTGVGPGLMDAATK 884
             CY LIH+LGRG VYLGSSRMGP HPHY++T EL  +I  LLDCTTW+G GPGLMDAAT+
Sbjct: 78   QCYELIHRLGRGAVYLGSSRMGPEHPHYIKTFELGSKIATLLDCTTWSGAGPGLMDAATQ 137

Query: 883  GALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSARKHGLVDAAMRCAASDR 704
            GALQA KPVGGFKIGREAGEWT S FHPYLPSE+YLTCRFFSARKHGLVDA +RC +S+R
Sbjct: 138  GALQAGKPVGGFKIGREAGEWTASNFHPYLPSESYLTCRFFSARKHGLVDAVVRCKSSER 197

Query: 703  TAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDLYYSKLLAFFDDCEDWGT 524
            TAV+ALPGG+GTLDE+FEI+ALIQLER+GS+ PVPFL+MNYD +YS LL F +DCE WGT
Sbjct: 198  TAVVALPGGIGTLDEIFEIMALIQLERIGSQLPVPFLLMNYDSFYSNLLEFLNDCEKWGT 257

Query: 523  VSKGEVGSLWKVCNGNTEALEYLREFYSCS*SKTERK 413
            VSK EV SLWKVCN N+EAL YL EFY  S  +T RK
Sbjct: 258  VSKNEVSSLWKVCNNNSEALAYLTEFYGLSPVETGRK 294


>ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis]
            gi|223531513|gb|EEF33344.1| carboxy-lyase, putative
            [Ricinus communis]
          Length = 302

 Score =  381 bits (978), Expect = e-103
 Identities = 179/241 (74%), Positives = 203/241 (84%), Gaps = 3/241 (1%)
 Frame = -1

Query: 1132 RVFMCKSE---FEERTSPDEVKKEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVEL 962
            R+ +CKSE   FEERTSP+E++KEI+ CY LIH+LGRGVVYLGSSRMGP HPHY+Q +EL
Sbjct: 51   RISLCKSELVDFEERTSPNEIRKEIERCYELIHRLGRGVVYLGSSRMGPDHPHYLQALEL 110

Query: 961  AREIGNLLDCTTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSET 782
            +RE+  LLDCT+W G GPGLMDA  KGALQA KPVGGFKI +EAGEWT S FHPYLPSET
Sbjct: 111  SREVAKLLDCTSWMGAGPGLMDATIKGALQAGKPVGGFKIAKEAGEWTASNFHPYLPSET 170

Query: 781  YLTCRFFSARKHGLVDAAMRCAASDRTAVIALPGGVGTLDEMFEILALIQLERVGSEHPV 602
            YLTCRFFSARKHGLVDAA+R   SDRTAV+ALPGG+GTLDEMFEILALIQLER+GS  PV
Sbjct: 171  YLTCRFFSARKHGLVDAAVRNTRSDRTAVVALPGGIGTLDEMFEILALIQLERIGSALPV 230

Query: 601  PFLVMNYDLYYSKLLAFFDDCEDWGTVSKGEVGSLWKVCNGNTEALEYLREFYSCS*SKT 422
            PF+VMNYD +Y KLL F  +CEDWGTVSKGEV  LWK+CN N+EAL YL +FY+   S  
Sbjct: 231  PFIVMNYDSFYQKLLDFIQNCEDWGTVSKGEVTPLWKICNSNSEALAYLTDFYNLHSSSD 290

Query: 421  E 419
            E
Sbjct: 291  E 291


>ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243479 [Vitis vinifera]
            gi|297737525|emb|CBI26726.3| unnamed protein product
            [Vitis vinifera]
          Length = 310

 Score =  377 bits (969), Expect = e-102
 Identities = 190/269 (70%), Positives = 213/269 (79%), Gaps = 12/269 (4%)
 Frame = -1

Query: 1213 LNNSHQKNSMKKM-----DKQTSKFKF--LKPRG--RVFMCKSEF---EERTSPDEVKKE 1070
            L NSHQ+            +QT  FKF  LKP    R+ +CK EF   EERTSP+EV+KE
Sbjct: 11   LRNSHQRTVRFAPFSGGERRQTLSFKFSELKPHNPWRILVCKGEFVEFEERTSPNEVRKE 70

Query: 1069 IQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTTWTGVGPGLMDAA 890
            I+ CY LI+KLGRGVVYLGSSRMGP H HY+Q +EL RE+ NLLDCT+WTG GPGLMDAA
Sbjct: 71   IEQCYELINKLGRGVVYLGSSRMGPDHSHYLQALELGREVANLLDCTSWTGAGPGLMDAA 130

Query: 889  TKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSARKHGLVDAAMRCAAS 710
            +KGALQA KPVGGFKIGREAG+ T   FHPYLPSETY TCRFFSARKHGLVDAA+R    
Sbjct: 131  SKGALQAGKPVGGFKIGREAGQQTALSFHPYLPSETYFTCRFFSARKHGLVDAAVRSCNC 190

Query: 709  DRTAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDLYYSKLLAFFDDCEDW 530
            DRTAV+ALPGG+GTLDE+FEILALIQL+R+GSE PVPFL+MNYD +YSKLL F  D E W
Sbjct: 191  DRTAVVALPGGIGTLDEVFEILALIQLQRIGSELPVPFLLMNYDSFYSKLLDFLSDSECW 250

Query: 529  GTVSKGEVGSLWKVCNGNTEALEYLREFY 443
            GTV KGEV SLWKVCN N+EAL YL EFY
Sbjct: 251  GTVCKGEVESLWKVCNNNSEALSYLAEFY 279


>ref|XP_002311733.1| predicted protein [Populus trichocarpa] gi|222851553|gb|EEE89100.1|
            predicted protein [Populus trichocarpa]
          Length = 226

 Score =  377 bits (967), Expect = e-102
 Identities = 174/223 (78%), Positives = 194/223 (86%)
 Frame = -1

Query: 1111 EFEERTSPDEVKKEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDC 932
            +F+ERTSP E++KEI  CY LIH+LGRGVVYLGSSRMGP HPHY Q +EL RE+ NLLDC
Sbjct: 1    DFDERTSPTEIRKEIGRCYELIHRLGRGVVYLGSSRMGPDHPHYSQALELGREVANLLDC 60

Query: 931  TTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSAR 752
            T+WTG GPGLMDAATKGAL+A KPVGGFKI +EAGEWT S FH YLPSETYLTCRFFSAR
Sbjct: 61   TSWTGAGPGLMDAATKGALEAGKPVGGFKIAKEAGEWTASNFHSYLPSETYLTCRFFSAR 120

Query: 751  KHGLVDAAMRCAASDRTAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDLY 572
            KHGLVDAA+R + SDRTAV+ALPGG+GTLDEMFEIL LIQL+R+GSE PVPFLVMNYD Y
Sbjct: 121  KHGLVDAAVRSSCSDRTAVVALPGGIGTLDEMFEILTLIQLQRIGSELPVPFLVMNYDSY 180

Query: 571  YSKLLAFFDDCEDWGTVSKGEVGSLWKVCNGNTEALEYLREFY 443
            Y KLL F  DCE+WGTVSKGEV SLWK+C  N+EAL YL +FY
Sbjct: 181  YQKLLDFLGDCENWGTVSKGEVASLWKICENNSEALAYLADFY 223


>ref|XP_004151464.1| PREDICTED: probable cytokinin riboside 5'-monophosphate
            phosphoribohydrolase LOGL9-like [Cucumis sativus]
            gi|449524603|ref|XP_004169311.1| PREDICTED: probable
            cytokinin riboside 5'-monophosphate phosphoribohydrolase
            LOGL9-like [Cucumis sativus]
          Length = 298

 Score =  369 bits (948), Expect = e-100
 Identities = 183/282 (64%), Positives = 217/282 (76%), Gaps = 9/282 (3%)
 Frame = -1

Query: 1258 MGVSLFNFTGWSAIRLNNSHQKNSMKKMDKQTSK---FKFLKPR---GRVFMCK---SEF 1106
            M  S+   +G   I + NSHQK    ++  +  K   FKF K      R  + K   +EF
Sbjct: 1    MSFSMMGSSGCE-ILIRNSHQKTVKLQLFHEKEKQMVFKFSKSGCNPARALLSKHEATEF 59

Query: 1105 EERTSPDEVKKEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTT 926
            EERTSP EV+ EI  CY LI++LG+GVVYLGSSRMGP H HY Q  EL+REI  LLDCTT
Sbjct: 60   EERTSPIEVRTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTT 119

Query: 925  WTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSARKH 746
            W+GVGPGLMDA TKGALQA  PVGGFKIGRE+GEWT+S+FHPYLP+ETY TCRFFSARKH
Sbjct: 120  WSGVGPGLMDAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKH 179

Query: 745  GLVDAAMRCAASDRTAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDLYYS 566
            GLVDAA+R  +SDRTA + LPGG+GT DE+FEILALIQL R+GS+ PVPFL+MNYD +YS
Sbjct: 180  GLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYS 239

Query: 565  KLLAFFDDCEDWGTVSKGEVGSLWKVCNGNTEALEYLREFYS 440
            KLL FF+DCE+WGT++KGEV SLWKVC+ N +A+ YL  FYS
Sbjct: 240  KLLEFFNDCENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYS 281


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