BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006623
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285276.2| PREDICTED: transcription initiation factor T...   100   2e-19
ref|XP_003631761.1| PREDICTED: transcription initiation factor T...   100   2e-19
ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002333679.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18

>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 1 [Vitis vinifera]
          Length = 667

 Score =  100 bits (248), Expect = 2e-19
 Identities = 67/163 (41%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
 Frame = +1

Query: 28  IHRYQY*LFLHLFSLT*C*IRILVLI*SYSLLTVSPGQPISISDDADAVILVGSRYSKAD 207
           I +Y Y L L     T   I +L +I  +    VSPGQP SISDDA+ V L+GS    A+
Sbjct: 158 ICQYSYELLLQYLHKTQS-ITMLGVINEHINFQVSPGQPASISDDAEVVTLIGSSQDDAN 216

Query: 208 K*ERITLG---VACRFY*RSSREGE*FAVRF*EKLKAKSKRGMWMKTRRN*GDGGKQGIS 378
           +  +  +    +      R  + G   +    EK + + K     + ++   +GGKQG S
Sbjct: 217 QINQKEIHWGLLEGSLEERLEKAGGLLSDS--EKAEGEVKETDTEENKKRSAEGGKQGSS 274

Query: 379 VKKLKKDKIVGTTGKSVCSESNTVSMAPRVKPELTLPILPTEV 507
           +KKLKKDK+VG  GK+   E+N VSMAPRVKPEL LP++PTEV
Sbjct: 275 IKKLKKDKVVGAAGKTARPEANAVSMAPRVKPELALPVMPTEV 317


>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
           unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  100 bits (248), Expect = 2e-19
 Identities = 67/163 (41%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
 Frame = +1

Query: 28  IHRYQY*LFLHLFSLT*C*IRILVLI*SYSLLTVSPGQPISISDDADAVILVGSRYSKAD 207
           I +Y Y L L     T   I +L +I  +    VSPGQP SISDDA+ V L+GS    A+
Sbjct: 165 ICQYSYELLLQYLHKTQS-ITMLGVINEHINFQVSPGQPASISDDAEVVTLIGSSQDDAN 223

Query: 208 K*ERITLG---VACRFY*RSSREGE*FAVRF*EKLKAKSKRGMWMKTRRN*GDGGKQGIS 378
           +  +  +    +      R  + G   +    EK + + K     + ++   +GGKQG S
Sbjct: 224 QINQKEIHWGLLEGSLEERLEKAGGLLSDS--EKAEGEVKETDTEENKKRSAEGGKQGSS 281

Query: 379 VKKLKKDKIVGTTGKSVCSESNTVSMAPRVKPELTLPILPTEV 507
           +KKLKKDK+VG  GK+   E+N VSMAPRVKPEL LP++PTEV
Sbjct: 282 IKKLKKDKVVGAAGKTARPEANAVSMAPRVKPELALPVMPTEV 324


>ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|222866341|gb|EEF03472.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 61/142 (42%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
 Frame = +1

Query: 91  ILVLI*SYSLLTVSPGQPISISDDADAVILVGSRYSKADK*ERITLG---VACRFY*RSS 261
           IL ++  +    VSPGQPISISDD DAV L+GS    A++  +  +    +      R  
Sbjct: 184 ILGIVNEHINFQVSPGQPISISDDPDAVTLIGSSQDAANQINKKEIHWGLLEDSLEERLE 243

Query: 262 REGE*FAVRF*EKLKAKSKRGMWMKTRRN*GDGGKQGISVKKLKKDKIVGTTGKSVCSES 441
           + G   +    EK + ++K G   + ++   DGGKQG S+KK KKDK    T K    E+
Sbjct: 244 KTGGFLSDT--EKTEGETKEGDMDENKKRSIDGGKQGASIKKSKKDKAASATTKIARPEA 301

Query: 442 NTVSMAPRVKPELTLPILPTEV 507
           NTVS APRVKPEL LP++PTEV
Sbjct: 302 NTVSAAPRVKPELPLPVMPTEV 323


>ref|XP_002333679.1| predicted protein [Populus trichocarpa] gi|222838003|gb|EEE76368.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 61/142 (42%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
 Frame = +1

Query: 91  ILVLI*SYSLLTVSPGQPISISDDADAVILVGSRYSKADK*ERITLG---VACRFY*RSS 261
           IL ++  +    VSPGQPISISDD DAV L+GS    A++  +  +    +      R  
Sbjct: 184 ILGIVNEHINFQVSPGQPISISDDPDAVTLIGSSQDAANQINKKEIHWGLLEDSLEERLE 243

Query: 262 REGE*FAVRF*EKLKAKSKRGMWMKTRRN*GDGGKQGISVKKLKKDKIVGTTGKSVCSES 441
           + G   +    EK + ++K G   + ++   DGGKQG S+KK KKDK    T K    E+
Sbjct: 244 KTGGFLSDT--EKTEGETKEGDMDENKKRSIDGGKQGASIKKSKKDKAASATTKIARPEA 301

Query: 442 NTVSMAPRVKPELTLPILPTEV 507
           NTVS APRVKPEL LP++PTEV
Sbjct: 302 NTVSAAPRVKPELPLPVMPTEV 323


>ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|222855648|gb|EEE93195.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
 Frame = +1

Query: 91  ILVLI*SYSLLTVSPGQPISISDDADAVILVGSRYSKADK*ERITLG---VACRFY*RSS 261
           IL ++  +    VSPGQPISISDD DAV L+GS    A++  +  +    +      R  
Sbjct: 184 ILGIVNEHINFQVSPGQPISISDDPDAVTLIGSSQDAANQINKKEIHWGLLEDSLEERLE 243

Query: 262 REGE*FAVRF*EKLKAKSKRGMWMKTRRN*GDGGKQGISVKKLKKDKIVGTTGKSVCSES 441
           + G   +    EK + ++K G   + ++   DGGKQG S+KK KKDK    T K+V  E+
Sbjct: 244 KTGGFLSDS--EKTEGETKEGDMDENKKRSMDGGKQGASIKKSKKDKAASATAKAVRLEA 301

Query: 442 NTVSMAPRVKPELTLPILPTEV 507
           NTV  APRVKPEL LP++P EV
Sbjct: 302 NTVPAAPRVKPELPLPVMPAEV 323