BLASTX nr result

ID: Coptis24_contig00006615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006615
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268658.1| PREDICTED: uncharacterized protein LOC100241...   251   2e-64
ref|XP_004152251.1| PREDICTED: uncharacterized protein LOC101206...   228   2e-57
ref|XP_003519006.1| PREDICTED: uncharacterized protein LOC100795...   216   8e-54
ref|XP_003536151.1| PREDICTED: uncharacterized protein LOC100798...   206   9e-51
ref|XP_002523082.1| conserved hypothetical protein [Ricinus comm...   203   7e-50

>ref|XP_002268658.1| PREDICTED: uncharacterized protein LOC100241933 [Vitis vinifera]
          Length = 269

 Score =  251 bits (642), Expect = 2e-64
 Identities = 139/276 (50%), Positives = 172/276 (62%), Gaps = 10/276 (3%)
 Frame = +3

Query: 132 LNSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHTSKPYYNSSTSTPTPNGAHNTKRP 311
           ++ + ++ESCT+QLH+W+PF           DS  H SKPY    + T + NG H+ KRP
Sbjct: 1   MSPKTSIESCTFQLHSWRPFQLPTTPKTLEPDS--HNSKPY----SITTSSNGLHS-KRP 53

Query: 312 CLFDR--SFSIDTIDMSRLNLIEDGE--KNLVNNKDKFKWVAXXXXXXXXXXXXXXXXXX 479
           CL DR  SF ID +D+S+L+L+ED +   +   N+   +W+                   
Sbjct: 54  CLSDRKTSFPIDALDISKLSLLEDDKPASSAPRNRGNVRWIDRKRRRRGSRSVSGRSSDR 113

Query: 480 XXTRRC-SIGASGAYATCSDFPIAAGTDSSGELFVNGDVSWSSDVSEAKNSRKE-GRESG 653
             TRRC S+GAS AYATCSDFP+AAGTDSSGELFVNGD +WSSDVSEAKNSRK+    SG
Sbjct: 114 SGTRRCCSVGASAAYATCSDFPVAAGTDSSGELFVNGDSNWSSDVSEAKNSRKDRDGGSG 173

Query: 654 EKESLGSGLWQIGGVDVGGNESGYGSEPGYRXXXXXXXXXXXXXXXXXV----WGERIGD 821
           EKE+LGSG   IG  +  GNESGYGSEPGYR                      WGE++GD
Sbjct: 174 EKENLGSGFGHIGIFETQGNESGYGSEPGYRGDAEFGYGDELDEEEDDARLLFWGEQLGD 233

Query: 822 TDCNMEIVGDGTFSEQKVHHRCRRKKHDWRMVGISR 929
            D NME+VG+ TFSEQK HHRCRRKKHD+RM+   R
Sbjct: 234 NDTNMEMVGENTFSEQKAHHRCRRKKHDYRMIDALR 269


>ref|XP_004152251.1| PREDICTED: uncharacterized protein LOC101206482 [Cucumis sativus]
          Length = 266

 Score =  228 bits (582), Expect = 2e-57
 Identities = 138/280 (49%), Positives = 169/280 (60%), Gaps = 9/280 (3%)
 Frame = +3

Query: 117 MTNKTLNSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHT-SKPYYNSSTSTPTPNGA 293
           M+ + L+SRH+++SCT + H W PF           ++S  T SKPYY+S   TP     
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSS---TPL---- 53

Query: 294 HNTKRPCLFDR--SFSIDTIDMSRLNLIEDGEKNLVNNKDKFKWVAXXXXXXXXXXXXXX 467
            +TKRPCL DR  SF++D IDMS L+LI+D +K  +     F+ +A              
Sbjct: 54  -HTKRPCLSDRTTSFNVDAIDMSALSLIDD-DKPSIPPARSFRLIARKRRRRGSRSVSGR 111

Query: 468 XXXXXXTRRC-SIGASGAYATCSDFPIAAGTDSSGELFVNGDVSWSSDVSEAKNSRKEGR 644
                 TRRC S+GAS A+ TCSDFPIA GTDSSGELFVNGD +WSSDVSEAKNSR   R
Sbjct: 112 SSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSR---R 168

Query: 645 ESGEKESLGSG-LWQIGGVDVGGNESGYGSEPGYR----XXXXXXXXXXXXXXXXXVWGE 809
           E  EK+ LGSG +   GG D  GNESGYGSEPGYR                     +WGE
Sbjct: 169 EREEKDHLGSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGE 228

Query: 810 RIGDTDCNMEIVGDGTFSEQKVHHRCRRKKHDWRMVGISR 929
           R+GD+   MEIVG+ TF++QK HHRCRRKKH+ RMV   R
Sbjct: 229 RLGDS--RMEIVGENTFADQKSHHRCRRKKHECRMVDALR 266


>ref|XP_003519006.1| PREDICTED: uncharacterized protein LOC100795813 [Glycine max]
          Length = 260

 Score =  216 bits (550), Expect = 8e-54
 Identities = 126/281 (44%), Positives = 154/281 (54%), Gaps = 8/281 (2%)
 Frame = +3

Query: 111 KTMTNKTLNSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHTSKPYYNSSTSTPTPNG 290
           ++M++K L+SRHT +SC  QL TWKPF               H  KPYY+          
Sbjct: 3   QSMSHKPLDSRHTTDSCLLQLRTWKPFKLQ--------QDGPHP-KPYYH---------- 43

Query: 291 AHNTKRPCLFDRSFSIDTIDMSRLNLIEDGEKNLVNNKDKFKWVAXXXXXXXXXXXXXXX 470
               KRPCL DR+ +  ++DMS+L L +D   N  N    ++ VA               
Sbjct: 44  ----KRPCLSDRTTTSFSLDMSKLTLADDDNHNPNNRATNYRLVARKRRRRGSRSVSGRS 99

Query: 471 XXXXXTRRC-SIGASGAYATCSDFPIAAGTDSSGELFVNGDVSWSSDVSEAKNSRKEGRE 647
                TRRC S+GAS AY TCSDFP+A GTDSSGELF NGD +WSSDVSEAKNSR+E   
Sbjct: 100 SDRSGTRRCCSVGASAAYGTCSDFPVAMGTDSSGELFGNGDPNWSSDVSEAKNSRRERER 159

Query: 648 ---SGEKESLGSGLWQIGGVDVGGNESGYGSEPGYR----XXXXXXXXXXXXXXXXXVWG 806
              SGEKE+LG G    G  +  GNESGYGSEPGYR                      WG
Sbjct: 160 DGGSGEKENLGVGFGVSGCSEANGNESGYGSEPGYRGDAEFGYGDEFDEEEDDPRLLFWG 219

Query: 807 ERIGDTDCNMEIVGDGTFSEQKVHHRCRRKKHDWRMVGISR 929
           +++G  D  ME+VG+ T  +QK HHRCRR+KHD RMV   R
Sbjct: 220 DQLGAVDSKMEMVGENTLLDQKSHHRCRRRKHDCRMVDALR 260


>ref|XP_003536151.1| PREDICTED: uncharacterized protein LOC100798288 [Glycine max]
          Length = 258

 Score =  206 bits (524), Expect = 9e-51
 Identities = 123/281 (43%), Positives = 156/281 (55%), Gaps = 8/281 (2%)
 Frame = +3

Query: 111 KTMTNKTLNSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHTSKPYYNSSTSTPTPNG 290
           ++M++K L+SRH+++SC  QL +WKPF               H  KPYY+          
Sbjct: 3   QSMSHKPLDSRHSIDSCLLQLRSWKPFKLQ--------QDGPHP-KPYYH---------- 43

Query: 291 AHNTKRPCLFDRSFSIDTIDMSRLNLIEDGEK--NLVNNK-DKFKWVAXXXXXXXXXXXX 461
               KRPCL DR+ +  ++DMS+L L  D +   N  NN+   ++ VA            
Sbjct: 44  ----KRPCLSDRTTTSFSLDMSKLTLAADDDTIHNPNNNRATNYRLVARKRRRRGSRSLS 99

Query: 462 XXXXXXXXTRRC-SIGASGAYATCSDFPIAAGTDSSGELFVNGDVSWSSDVSEAKNSRKE 638
                   TRRC S+GAS AY TCSDFP+A GTDSSGELF NGD +WSSDVSEAKNSR+E
Sbjct: 100 GRSSDRSGTRRCCSVGASAAYGTCSDFPVAMGTDSSGELFGNGDPNWSSDVSEAKNSRRE 159

Query: 639 GRESGEKESLGSGLWQIGGVDVGGNESGYGSEPGYR----XXXXXXXXXXXXXXXXXVWG 806
               GEKE++G G    G  D  GNESGYGSEPGYR                      WG
Sbjct: 160 RERDGEKENVGVGFGVSGCSDANGNESGYGSEPGYRGDAEFGYGDEFDEEEDDPRLLFWG 219

Query: 807 ERIGDTDCNMEIVGDGTFSEQKVHHRCRRKKHDWRMVGISR 929
           +++GD+    E+VG+ T  +QK HHRCRR+KHD RMV   R
Sbjct: 220 DQLGDS--KREMVGENTLLDQKSHHRCRRRKHDCRMVDALR 258


>ref|XP_002523082.1| conserved hypothetical protein [Ricinus communis]
           gi|223537644|gb|EEF39267.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  203 bits (516), Expect = 7e-50
 Identities = 123/281 (43%), Positives = 160/281 (56%), Gaps = 14/281 (4%)
 Frame = +3

Query: 117 MTNKTLNSRHTLESCTYQLHTWKPFXXXXXXXXXXXDSSDHTSKPYYNSSTSTPTPNGAH 296
           M++++L+SRH+++SCT+QLH+W+PF                  KPY  SST         
Sbjct: 1   MSHRSLDSRHSIDSCTFQLHSWRPFHLQTL--------DSDPPKPY--SST--------- 41

Query: 297 NTKRPCLFDR--SFSIDTIDMSRLNLIEDGEKNLV------NNKDKFKWVAXXXXXXXXX 452
            TKRPCL DR  SF ID+ID+S+L++I+D +   V      N++   + +A         
Sbjct: 42  -TKRPCLSDRTTSFPIDSIDISKLSIIDDDKPISVSAATAYNSRGSLRLIARKRRRRGSR 100

Query: 453 XXXXXXXXXXXTRRCSIGASGAYATCSDFPIAAGTDSSGELFVNGDVSWSSDVSEAKNS- 629
                      TRRC   + GA+ TCSDFP+A GTDSSGELF NGD +W SDVSEAKNS 
Sbjct: 101 SVSGRSSDRSGTRRCC--SVGAHGTCSDFPVAVGTDSSGELFGNGDSNWGSDVSEAKNSI 158

Query: 630 -RKEGRESGEKESLGSGLWQIGGVDVGGNESGYGSEPGYRXXXXXXXXXXXXXXXXXV-- 800
            R++ RE  EKE++G G  Q G  +  GNESGYGSEPGYR                    
Sbjct: 159 KREKDREREEKENMGYG--QFGTFENQGNESGYGSEPGYRGDAEFGYEDEIDEEEDDAKL 216

Query: 801 --WGERIGDTDCNMEIVGDGTFSEQKVHHRCRRKKHDWRMV 917
             WG+  G T   ME+VG+ +FS+QK HHRCRRKKHD RM+
Sbjct: 217 LFWGDHFGGTGPKMEMVGENSFSDQKSHHRCRRKKHDNRML 257


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