BLASTX nr result
ID: Coptis24_contig00006607
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006607
(1860 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF71990.1|AC013453_15 Hypothetical protein [Arabidopsis thal... 167 7e-39
ref|NP_173018.2| centromere protein C [Arabidopsis thaliana] gi|... 167 7e-39
ref|XP_002890116.1| CENP-C [Arabidopsis lyrata subsp. lyrata] gi... 160 1e-36
ref|XP_002298134.1| predicted protein [Populus trichocarpa] gi|2... 159 2e-36
gb|AAU04611.1| CENP-C [Arabidopsis arenosa] 157 7e-36
>gb|AAF71990.1|AC013453_15 Hypothetical protein [Arabidopsis thaliana]
Length = 710
Score = 167 bits (424), Expect = 7e-39
Identities = 160/551 (29%), Positives = 251/551 (45%), Gaps = 44/551 (7%)
Frame = -3
Query: 1843 VVNLETTDMH---GASQEKEAVVDGCIDAIQ----DSVAEEKNKLDGILDELL--STDCM 1691
V+NLE ++ + Q E+ + + DS + L+ +L +LL S + +
Sbjct: 192 VINLEASEKEIPIASEQSLESATAAHVTTVDREVDDSTVDTDKDLNNVLKDLLACSREEL 251
Query: 1690 EGDGAVKLLQERLHIRPVNVDNFCLPELGSVRKTDVRLPLEHVPRPRKSSSYADNVTKKS 1511
EGDGA+KLL+ERL I+ N++ F +PE VRK +++ + P RKS S N+ K +
Sbjct: 252 EGDGAIKLLEERLQIKSFNIEKFSIPEFQDVRKMNLKASGSNPPN-RKSLSDIQNILKGT 310
Query: 1510 KDKGSVETHNDXXXXXXXXXXXXSMLSRHVSQRDRPSDPFLFSE------SDRSP--VGD 1355
++ +V ++ +H S + P D F F + D+ P V
Sbjct: 311 -NRVAVRKNSHSPSPQTI---------KHFSSPNPPVDQFSFPDIHNLLPGDQQPSEVNV 360
Query: 1354 STRANGIENGAPSPHVDSTSKSAEVNRSALSFSGKFESMIKENPTDSNM---------VL 1202
A I N +P+ +V + ++ N S + SG+ +S I S++ V+
Sbjct: 361 QPIAKDIPNTSPT-NVGTVDVASPFNDSVVKRSGEDDSHIHSGIHRSHLSRDGNPDICVM 419
Query: 1201 DKLATEDSVHALDQVEHNSSRINDNVNLTVNGCDR---DLEDEVDGMQQPEPIGKGKSPA 1031
D ++ S V+ + +V ++ +G +R D E++ + ++ + + + A
Sbjct: 420 DSISNRSSAMLQKNVDMRTKGKEVDVPMSESGANRNTGDRENDAEINEETDNLERLAECA 479
Query: 1030 GSTIVLDKLRTEDSSHSLDPLDGSSSKHTNHMDYSLNGCDGHLEDEVSTDTYFDTNSISV 851
+ EDS + G+SSK N N G LE
Sbjct: 480 SKEVTRPFTVEEDS---IPYQQGASSKSPNRAPEQYNTMGGSLEHAEHNQ---------- 526
Query: 850 DGMQQQETVGSIVAEDGCEGLTMKNVHGPESQLDVSGDTIDADNEGHVHSDNAVGIPEQN 671
G+ ++E V + GL ++N PE T G S+ +
Sbjct: 527 -GLHEEENVNT----GSASGLQVENA--PEVHKYSHKQTNKRRKRGSSDSNVKKRSKTVH 579
Query: 670 IESGGGQTHQQPPGESL---------NVRIKQKAPKRSGRESKIVS-RRSLAGAGTKWQG 521
E+GG + + P ES N R ++K K E K+ S R+SLA AGTK +G
Sbjct: 580 GETGGDKQMKTLPHESRAKKQTKGKSNEREEKKPKKTLTHEGKLFSCRKSLAAAGTKIEG 639
Query: 520 GVRRTTRNIMRPLEYWRGERVVYGRVHESLPSVIAYKYASPAKGK-----LKVHSFVSDD 356
GVRR+TR RPLEYWRGER +YGR+HESL +VI KYASP +GK KV SFVSD+
Sbjct: 640 GVRRSTRIKSRPLEYWRGERFLYGRIHESLTTVIGIKYASPGEGKRDSRASKVKSFVSDE 699
Query: 355 YKDLVEKQSLY 323
YK LV+ +L+
Sbjct: 700 YKKLVDFAALH 710
>ref|NP_173018.2| centromere protein C [Arabidopsis thaliana]
gi|51477443|gb|AAU04629.1| CENP-C [Arabidopsis thaliana]
gi|332191225|gb|AEE29346.1| centromere protein C
[Arabidopsis thaliana]
Length = 705
Score = 167 bits (424), Expect = 7e-39
Identities = 160/551 (29%), Positives = 251/551 (45%), Gaps = 44/551 (7%)
Frame = -3
Query: 1843 VVNLETTDMH---GASQEKEAVVDGCIDAIQ----DSVAEEKNKLDGILDELL--STDCM 1691
V+NLE ++ + Q E+ + + DS + L+ +L +LL S + +
Sbjct: 187 VINLEASEKEIPIASEQSLESATAAHVTTVDREVDDSTVDTDKDLNNVLKDLLACSREEL 246
Query: 1690 EGDGAVKLLQERLHIRPVNVDNFCLPELGSVRKTDVRLPLEHVPRPRKSSSYADNVTKKS 1511
EGDGA+KLL+ERL I+ N++ F +PE VRK +++ + P RKS S N+ K +
Sbjct: 247 EGDGAIKLLEERLQIKSFNIEKFSIPEFQDVRKMNLKASGSNPPN-RKSLSDIQNILKGT 305
Query: 1510 KDKGSVETHNDXXXXXXXXXXXXSMLSRHVSQRDRPSDPFLFSE------SDRSP--VGD 1355
++ +V ++ +H S + P D F F + D+ P V
Sbjct: 306 -NRVAVRKNSHSPSPQTI---------KHFSSPNPPVDQFSFPDIHNLLPGDQQPSEVNV 355
Query: 1354 STRANGIENGAPSPHVDSTSKSAEVNRSALSFSGKFESMIKENPTDSNM---------VL 1202
A I N +P+ +V + ++ N S + SG+ +S I S++ V+
Sbjct: 356 QPIAKDIPNTSPT-NVGTVDVASPFNDSVVKRSGEDDSHIHSGIHRSHLSRDGNPDICVM 414
Query: 1201 DKLATEDSVHALDQVEHNSSRINDNVNLTVNGCDR---DLEDEVDGMQQPEPIGKGKSPA 1031
D ++ S V+ + +V ++ +G +R D E++ + ++ + + + A
Sbjct: 415 DSISNRSSAMLQKNVDMRTKGKEVDVPMSESGANRNTGDRENDAEINEETDNLERLAECA 474
Query: 1030 GSTIVLDKLRTEDSSHSLDPLDGSSSKHTNHMDYSLNGCDGHLEDEVSTDTYFDTNSISV 851
+ EDS + G+SSK N N G LE
Sbjct: 475 SKEVTRPFTVEEDS---IPYQQGASSKSPNRAPEQYNTMGGSLEHAEHNQ---------- 521
Query: 850 DGMQQQETVGSIVAEDGCEGLTMKNVHGPESQLDVSGDTIDADNEGHVHSDNAVGIPEQN 671
G+ ++E V + GL ++N PE T G S+ +
Sbjct: 522 -GLHEEENVNT----GSASGLQVENA--PEVHKYSHKQTNKRRKRGSSDSNVKKRSKTVH 574
Query: 670 IESGGGQTHQQPPGESL---------NVRIKQKAPKRSGRESKIVS-RRSLAGAGTKWQG 521
E+GG + + P ES N R ++K K E K+ S R+SLA AGTK +G
Sbjct: 575 GETGGDKQMKTLPHESRAKKQTKGKSNEREEKKPKKTLTHEGKLFSCRKSLAAAGTKIEG 634
Query: 520 GVRRTTRNIMRPLEYWRGERVVYGRVHESLPSVIAYKYASPAKGK-----LKVHSFVSDD 356
GVRR+TR RPLEYWRGER +YGR+HESL +VI KYASP +GK KV SFVSD+
Sbjct: 635 GVRRSTRIKSRPLEYWRGERFLYGRIHESLTTVIGIKYASPGEGKRDSRASKVKSFVSDE 694
Query: 355 YKDLVEKQSLY 323
YK LV+ +L+
Sbjct: 695 YKKLVDFAALH 705
>ref|XP_002890116.1| CENP-C [Arabidopsis lyrata subsp. lyrata] gi|297335958|gb|EFH66375.1|
CENP-C [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 160 bits (404), Expect = 1e-36
Identities = 155/521 (29%), Positives = 233/521 (44%), Gaps = 45/521 (8%)
Frame = -3
Query: 1765 IQDSVAEEKNKLDGILDELL--STDCMEGDGAVKLLQERLHIRPVNVDNFCLPELGSVRK 1592
+ DS + L+ IL ELL S D +EGD AVK L++ L I+ +NV+ F +PE VRK
Sbjct: 220 VDDSTVDTDKDLNNILKELLASSRDELEGDAAVKRLEDVLQIKSLNVEKFSIPEFQDVRK 279
Query: 1591 TDVRLPLEHVPRPRKSSSYADNVTKK-SKDKGSVETHNDXXXXXXXXXXXXSMLSRHVSQ 1415
+++ + P RKS S N+ K + G +H+ +H S
Sbjct: 280 MNMKASGSN-PSNRKSLSDIQNILKGIHRVAGRKNSHSPSP-----------QTRKHFSS 327
Query: 1414 RDRPSDPFLFSE------SDRSP--VGDSTRANGIENGAPSPHVDSTSKSAEVNRSALSF 1259
+ P D F F + D+ P V A I N +PS +V + ++ N S
Sbjct: 328 PNPPVDQFSFPDIHNLLPGDQQPSEVDVQPLAKDIANTSPS-NVGTVDVASPFNNSVEKR 386
Query: 1258 SGKFESMIKENPTDSNM---------VLDKLATEDSVHALDQVEHNSSRINDNVNLTVNG 1106
SG+ +S I S++ V+D ++ +S V+ ++ +V ++ +G
Sbjct: 387 SGEDDSHIHSGIHRSHLRPDGNADICVMDSISNRNSAMLEVNVDMRTTGKEVDVPISESG 446
Query: 1105 CDR---------DLEDEVDGMQQPEPIGKGKSPAGSTIVLDKLRTEDSSHSLDPLDGSSS 953
+R D+ +E D ++ ++ T+ D + + G+SS
Sbjct: 447 ANRNTGQRENDTDINEETDHLEMLAEYASKEATRPFTVEEDSIPYQQ---------GTSS 497
Query: 952 KHTNHMDYSLNGCDG---HLEDEVSTDTYFDTNSISVDGMQQQETVGSIVAEDGCEGLTM 782
N N DG H E + N+ S G+Q+ A + T
Sbjct: 498 NSPNRAPEQYNTMDGPSEHAEHNQGLHEEENVNTDSASGLQENALQE---AHNSSHKQTN 554
Query: 781 KNVHGPESQLDVSGDTIDADNEGHVHSDNAVGIPEQNI---ESGGGQTHQQPPGESLNVR 611
K S +V VH + G P+ ESG + ++ E
Sbjct: 555 KRRKRGSSDSNVK------KRSKTVHGETG-GDPQMKTLPHESGAKKQTKRKSNER---- 603
Query: 610 IKQKAPKRSG----RESKIVSRR-SLAGAGTKWQGGVRRTTRNIMRPLEYWRGERVVYGR 446
++K PK + RE K+ SRR SLA AGTK +GGVRR+TR RPLEYW+GER +YGR
Sbjct: 604 -EEKKPKNTRKTLTREGKLFSRRKSLAAAGTKMEGGVRRSTRIKSRPLEYWKGERFLYGR 662
Query: 445 VHESLPSVIAYKYASPAKGK-----LKVHSFVSDDYKDLVE 338
+HESL +VI KYASP +GK KV SFVSD+YK+LV+
Sbjct: 663 IHESLTTVIGIKYASPGEGKSDLRACKVKSFVSDEYKELVD 703
>ref|XP_002298134.1| predicted protein [Populus trichocarpa] gi|222845392|gb|EEE82939.1|
predicted protein [Populus trichocarpa]
Length = 746
Score = 159 bits (402), Expect = 2e-36
Identities = 161/572 (28%), Positives = 266/572 (46%), Gaps = 60/572 (10%)
Frame = -3
Query: 1858 SQSYSVVNLETTDMHGASQEKEAVVDGCIDAIQDSVAEEKNKLDGILDELLSTDC--MEG 1685
SQ+ ++ +E+T++ A +E E + + Q S+A+ + ++D +LDELL+ DC ++G
Sbjct: 219 SQAVALQLMESTNV--ALEESELAGEWLLVQEQASMAKAEKRVDKLLDELLACDCEELDG 276
Query: 1684 DGAVKLLQERLHIRPVNVDNFCLPELGSVRKTDVRLPLEHVPRPRKSSSYADNVTK---- 1517
DGAV LLQ+RL ++ ++++ LPEL V++T++ ++P+PR S+ N+ +
Sbjct: 277 DGAVTLLQDRLQVKSLDIEKLNLPELLYVQRTNLNALGGNLPKPRNVLSHIHNLPRRTLT 336
Query: 1516 --KSKDKGSVETHNDXXXXXXXXXXXXSMLSRHVSQRDRPSDPFLFS---ESDRSPVGDS 1352
K + G+ + ++L +H+ Q + P++P L S E D + G+S
Sbjct: 337 PMKQQIAGNSTSSFGSPAPPKSQLASLALLRKHILQSNPPTNPVLKSLIIEEDDTTAGNS 396
Query: 1351 TRANGIENGAPSPHVDSTSKSAEVNRSALSFSGKFESMIKENPTDSNMVLDKLATEDSVH 1172
+ + A + ++ S ++V S S + +SN+ +D T + +
Sbjct: 397 SPTE-VAVKALNDNLTSLGSGSDVRPSKSSAEVE----------NSNVGVDNGITYEYLS 445
Query: 1171 ALD---QVEHNSSRINDNVNLTVNGCDRDLEDEVDGMQQPEPIGKGKSPAGSTIVLDKLR 1001
L V+ N ++++LT G +ED + + + S GS ++ +
Sbjct: 446 QLGGDADVQTNGPNELEDMDLTSRGSAMQVED-IQQKAVDKSLNGNLSSLGSGSIVCPSK 504
Query: 1000 T----EDSSHSLDP--LDGSSSKHTNHMDYSLNGCDGHLEDEVSTDTYFDTNSISVDGMQ 839
T E+S+ +D +D +SS +D N + LED DT ++
Sbjct: 505 TSAEVENSNIGVDDGVIDENSSLRGGDVDIQTNRRN-ELEDMPE-----DTAMEYLNPRD 558
Query: 838 QQETVGSIVAEDGCEGLTMKNVHGPESQLDVSGDTIDADNEGHVHSDNAVGIPEQNIESG 659
Q E + + ED +D +T D D E P+ N E
Sbjct: 559 QFEQLSAAFVEDHA--------------MDSCPETQDRDLE-----QTKANTPKHNNERV 599
Query: 658 GGQTHQQPPGESLNVRIKQKAPKRSGRESKIVSRR-SLAGA------------------- 539
++PP S N + K+K+ GR+ + +SRR SLAGA
Sbjct: 600 -----EKPPVVSTNKQTKEKSCTAKGRKYRSLSRRQSLAGAHCCVKLSIIWLFFSLLFLS 654
Query: 538 ----------------GTKWQGGVRRTTRNIMRPLEYWRGERVVYGRVHESLPSVIAYKY 407
GT W+ GVRR+TR RPLEYW+GER +YGR+H SL +VI KY
Sbjct: 655 QSYCVDNLIYVVSIASGTSWETGVRRSTRIRSRPLEYWKGERFLYGRIHGSLATVIGIKY 714
Query: 406 ASPA--KGK--LKVHSFVSDDYKDLVEKQSLY 323
SP KGK LKV SFVSD+YK+LVE +L+
Sbjct: 715 ESPQNDKGKPALKVKSFVSDEYKNLVELAALH 746
>gb|AAU04611.1| CENP-C [Arabidopsis arenosa]
Length = 710
Score = 157 bits (398), Expect = 7e-36
Identities = 150/512 (29%), Positives = 234/512 (45%), Gaps = 36/512 (7%)
Frame = -3
Query: 1765 IQDSVAEEKNKLDGILDELL--STDCMEGDGAVKLLQERLHIRPVNVDNFCLPELGSVRK 1592
+ DS + L+ IL +LL S D +EGD AVKLL++ L I +NV+ F +PE VRK
Sbjct: 222 VDDSTVDTDKDLNNILKKLLASSRDELEGDAAVKLLEDHLQIESLNVEKFSIPEFQDVRK 281
Query: 1591 TDVRLPLEHVPRPRKSSSYADNVTKKS-KDKGSVETHNDXXXXXXXXXXXXSMLSRHVSQ 1415
+++ + P RKS S N+ K + + G +H+ +H S
Sbjct: 282 MNLKASGSN-PSNRKSLSDIQNILKGTHRVAGRKNSHSPSP-----------QTRKHFSS 329
Query: 1414 RDRPSDPFLFSE------SDRSP--VGDSTRANGIENGAPS---------PHVDSTSKSA 1286
+ P D F F + D+ P V A I N +PS P +S K +
Sbjct: 330 PNPPVDQFSFPDIHNLLPGDQQPSEVDVQPLAKDIANTSPSNVGTVDVASPFNNSVEKRS 389
Query: 1285 EVNRSALSFSGKFESMIKENPTDSNMVLDKLATEDSVHALDQVEHNSSRINDNVNLTVNG 1106
+ + S + SG S ++ + V+D ++ +S V+ ++ +V ++ +G
Sbjct: 390 DEDDSHIH-SGIHRSHLRPDGNVDICVMDSISNRNSAMLEVNVDMRTTGKEVDVPMSESG 448
Query: 1105 CDRDL---EDEVDGMQQPEPIGKGKSPAGSTIVLDKLRTEDSSHSLDPLDGSSSKHTNHM 935
+R+ E+++D ++ + A EDS + G+SS N
Sbjct: 449 ANRNTGQRENDIDINEETGHLEMLAEYASKEATRPFTVEEDS---IPYQQGTSSNSPNRA 505
Query: 934 DYSLNGCDG---HLEDEVSTDTYFDTNSISVDGMQQQETVGSIVAEDGCEGLTMKNVHGP 764
N DG H E + N+ S G+Q+ + + + ++
Sbjct: 506 PEQYNTMDGPSEHAEHNQGLHEEENVNTDSASGLQEN-ALQEVHNSSHKQTNKLRKRGSS 564
Query: 763 ESQLDVSGDTIDADNEGHVHSDNAVGIPEQNIESGGGQTHQQPPGESLNVRIKQKAPKRS 584
+S + T+ + G +P ESG + ++ E ++K PK +
Sbjct: 565 DSNVKKRSKTVHGETGGDPQMKT---LPH---ESGVKKQTKRKSNER-----EEKKPKNT 613
Query: 583 G----RESKIVSRR-SLAGAGTKWQGGVRRTTRNIMRPLEYWRGERVVYGRVHESLPSVI 419
RE K+ SRR SLA AGTK +GGVRR+TR RPLEYW+GER +YGR+HESL +VI
Sbjct: 614 RKTLTREGKLFSRRKSLAAAGTKMEGGVRRSTRIKSRPLEYWKGERFLYGRIHESLTTVI 673
Query: 418 AYKYASPAKGK-----LKVHSFVSDDYKDLVE 338
KYASP +GK KV SFVSD+YK+LV+
Sbjct: 674 GIKYASPGEGKSDVRACKVKSFVSDEYKELVD 705