BLASTX nr result

ID: Coptis24_contig00006575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006575
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20214.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...   196   2e-48
ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-l...   191   6e-47
ref|XP_002524264.1| ATP binding protein, putative [Ricinus commu...   191   6e-47
ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-l...   191   8e-47

>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  196 bits (497), Expect = 2e-48
 Identities = 93/110 (84%), Positives = 105/110 (95%)
 Frame = +3

Query: 207 NKEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPH 386
           NKEKVIVISGPTGAGK+RLALELAK+LNGEIISADSVQVY+GLD GSAKPSL DRKEVPH
Sbjct: 31  NKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLMDRKEVPH 90

Query: 387 HLIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIY 536
           HL+DILHPSE+YSVG+FFEDAR+ TR+I+ + RVPI+AGGTGLYLRW+IY
Sbjct: 91  HLVDILHPSEDYSVGQFFEDAREKTRDILNSERVPIVAGGTGLYLRWFIY 140


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score =  196 bits (497), Expect = 2e-48
 Identities = 93/110 (84%), Positives = 105/110 (95%)
 Frame = +3

Query: 207 NKEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPH 386
           NKEKVIVISGPTGAGK+RLALELAK+LNGEIISADSVQVY+GLD GSAKPSL DRKEVPH
Sbjct: 46  NKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLMDRKEVPH 105

Query: 387 HLIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIY 536
           HL+DILHPSE+YSVG+FFEDAR+ TR+I+ + RVPI+AGGTGLYLRW+IY
Sbjct: 106 HLVDILHPSEDYSVGQFFEDAREKTRDILNSERVPIVAGGTGLYLRWFIY 155


>ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Cucumis sativus]
           gi|449483192|ref|XP_004156518.1| PREDICTED: tRNA
           dimethylallyltransferase 9-like [Cucumis sativus]
          Length = 482

 Score =  191 bits (485), Expect = 6e-47
 Identities = 91/109 (83%), Positives = 102/109 (93%)
 Frame = +3

Query: 210 KEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPHH 389
           K KVIVISGPTG+GK+RLA+ELAK+LNGEIISADSVQVYQGLD GSAKPS  DRKEVPHH
Sbjct: 68  KSKVIVISGPTGSGKSRLAMELAKRLNGEIISADSVQVYQGLDIGSAKPSARDRKEVPHH 127

Query: 390 LIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIY 536
           LIDIL PS+EYSVGRFFEDARQATR +++NGRVPI+ GGTGLYLRW++Y
Sbjct: 128 LIDILRPSDEYSVGRFFEDARQATRCVLDNGRVPIVCGGTGLYLRWFMY 176


>ref|XP_002524264.1| ATP binding protein, putative [Ricinus communis]
           gi|223536455|gb|EEF38103.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 446

 Score =  191 bits (485), Expect = 6e-47
 Identities = 89/109 (81%), Positives = 105/109 (96%)
 Frame = +3

Query: 210 KEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPHH 389
           +EKV+VISGPTGAGK+RLALELAK+LNGEIISADSVQVY+GLD GSAKPS ++RKEV HH
Sbjct: 40  REKVLVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSPTERKEVRHH 99

Query: 390 LIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIY 536
           LID+ HPSE+YSVG+FFEDARQATR+I++NGRVPI+AGGTGLYLRW++Y
Sbjct: 100 LIDVSHPSEDYSVGKFFEDARQATRDILDNGRVPIVAGGTGLYLRWFVY 148


>ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Glycine max]
          Length = 448

 Score =  191 bits (484), Expect = 8e-47
 Identities = 90/109 (82%), Positives = 104/109 (95%)
 Frame = +3

Query: 210 KEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPHH 389
           KEKVIVISGPTG+GK+RLALELAK+LNGEI+SADSVQVY+GLD GSAKPS ++RKEVPHH
Sbjct: 44  KEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPSPNERKEVPHH 103

Query: 390 LIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIY 536
           L+DILHPSE+YSVG+FFEDARQAT  I++NGRVPI+ GGTGLYLRW+IY
Sbjct: 104 LVDILHPSEDYSVGQFFEDARQATGCILDNGRVPIVVGGTGLYLRWFIY 152


Top