BLASTX nr result

ID: Coptis24_contig00006543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006543
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17902.3| unnamed protein product [Vitis vinifera]              161   2e-38
ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263...   160   4e-38
ref|XP_003518480.1| PREDICTED: uncharacterized protein LOC100818...   149   3e-34
ref|XP_003545166.1| PREDICTED: uncharacterized protein LOC100775...   147   2e-33
ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33

>emb|CBI17902.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  161 bits (407), Expect(2) = 2e-38
 Identities = 87/164 (53%), Positives = 109/164 (66%)
 Frame = +3

Query: 33  REDLNSDAMESEVILAMLHSMAIMRLVNGVAHKGRYETECSIADKALEIGLPRMLVDLRH 212
           R D N D + SE +LAML+ MAIMRLVNGV  K R   + SIA+ A  IG+PRML+D+RH
Sbjct: 7   RVDANDDLLHSEEMLAMLYCMAIMRLVNGVVEKTRKAKQVSIAEAADAIGIPRMLIDIRH 66

Query: 213 EASH*DLPSLWLVQLASVKVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELAFY 392
           E SH DLPSL LV+LASVK L+W+KSYYWEPQK AI  QRD    +RK++KSK+ ELAF 
Sbjct: 67  EGSHRDLPSLLLVRLASVKALDWLKSYYWEPQKKAIPLQRDGSSNIRKEIKSKIRELAFC 126

Query: 393 LNTNESSQLGSLPMKRKRSKQSSVILARFNLFSHTVKKLHGSQS 524
           L   +SS+ G  P+ + + K   ++      FS    KL  S S
Sbjct: 127 LKVRQSSRSGG-PLAKGKRKHGELLCGSNKFFSVMTGKLLSSNS 169



 Score = 23.9 bits (50), Expect(2) = 2e-38
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 595 VYTSPPSEVAAVLLDLLV 648
           +Y+S  SEV +VLLDLL+
Sbjct: 186 LYSSYSSEVVSVLLDLLL 203


>ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263330 [Vitis vinifera]
          Length = 597

 Score =  160 bits (405), Expect(3) = 4e-38
 Identities = 84/143 (58%), Positives = 102/143 (71%)
 Frame = +3

Query: 27  FFREDLNSDAMESEVILAMLHSMAIMRLVNGVAHKGRYETECSIADKALEIGLPRMLVDL 206
           FFR D N D + SE +LAML+ MAIMRLVNGV  K R   + SIA+ A  IG+PRML+D+
Sbjct: 82  FFRVDANDDLLHSEEMLAMLYCMAIMRLVNGVVEKTRKAKQVSIAEAADAIGIPRMLIDI 141

Query: 207 RHEASH*DLPSLWLVQLASVKVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELA 386
           RHE SH DLPSL LV+LASVK L+W+KSYYWEPQK AI  QRD    +RK++KSK+ ELA
Sbjct: 142 RHEGSHRDLPSLLLVRLASVKALDWLKSYYWEPQKKAIPLQRDGSSNIRKEIKSKIRELA 201

Query: 387 FYLNTNESSQLGSLPMKRKRSKQ 455
           F L   +SS+ G    K K  K+
Sbjct: 202 FCLKVRQSSRSGGPLAKGKLPKK 224



 Score = 23.9 bits (50), Expect(3) = 4e-38
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 595 VYTSPPSEVAAVLLDLLV 648
           +Y+S  SEV +VLLDLL+
Sbjct: 236 LYSSYSSEVVSVLLDLLL 253



 Score = 20.4 bits (41), Expect(3) = 4e-38
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 554 PKKHITRILGKL 589
           PKK ITRIL  L
Sbjct: 222 PKKQITRILKNL 233


>ref|XP_003518480.1| PREDICTED: uncharacterized protein LOC100818525 [Glycine max]
          Length = 628

 Score =  149 bits (377), Expect = 3e-34
 Identities = 81/153 (52%), Positives = 106/153 (69%)
 Frame = +3

Query: 27  FFREDLNSDAMESEVILAMLHSMAIMRLVNGVAHKGRYETECSIADKALEIGLPRMLVDL 206
           FFR+D ++DA  SE +LAML+ MAIMRLVNGV  K R +   SIA  A  IG+PRML+D+
Sbjct: 91  FFRQDESNDASLSEEMLAMLYCMAIMRLVNGVVEKTRKKEVTSIAVAADAIGIPRMLIDI 150

Query: 207 RHEASH*DLPSLWLVQLASVKVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELA 386
           RHE SH +LPSL +V+ ASVK L+W+KSYYWEPQ  AI    + I  V+K++KSK+ ELA
Sbjct: 151 RHEGSHRELPSLKIVRSASVKALDWLKSYYWEPQSKAIPFHGEGIANVKKEIKSKIRELA 210

Query: 387 FYLNTNESSQLGSLPMKRKRSKQSSVILARFNL 485
             L  N S+Q  S  +K KRSK+    + ++ L
Sbjct: 211 ICLKVNGSAQSSSSLLKAKRSKKQITKILKYVL 243


>ref|XP_003545166.1| PREDICTED: uncharacterized protein LOC100775513 [Glycine max]
          Length = 631

 Score =  147 bits (370), Expect = 2e-33
 Identities = 85/181 (46%), Positives = 113/181 (62%)
 Frame = +3

Query: 30  FREDLNSDAMESEVILAMLHSMAIMRLVNGVAHKGRYETECSIADKALEIGLPRMLVDLR 209
           FR D  +DA  SE +LAML+ MAIMRLVNGV  K R +   SIA  A  IG+PRML+D+R
Sbjct: 87  FRHDQWNDASLSEEMLAMLYCMAIMRLVNGVVEKTRKKEVASIAVAADAIGIPRMLIDIR 146

Query: 210 HEASH*DLPSLWLVQLASVKVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELAF 389
           HE SH +LPSL +V+ ASVK L W+KSYYWEPQ  AI    + I  V K++KS++ ELA 
Sbjct: 147 HEGSHRELPSLKIVRSASVKALGWLKSYYWEPQSKAIPFHGEGIAKVNKEIKSRIRELAI 206

Query: 390 YLNTNESSQLGSLPMKRKRSKQSSVILARFNLFSHTVKKLHGSQSQDN*SCQALVLRNIL 569
            L  N S+Q  S  +K KR K   ++  R  L S  V K   S+++ +      +L+ +L
Sbjct: 207 CLKVNGSAQSSSSLLKAKRVKHGELLFGRNKLLSLIVGKSQTSRTRGSKKQITKILKYVL 266

Query: 570 Q 572
           +
Sbjct: 267 R 267


>ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|222850418|gb|EEE87965.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  146 bits (369), Expect = 3e-33
 Identities = 77/143 (53%), Positives = 103/143 (72%)
 Frame = +3

Query: 30  FREDLNSDAMESEVILAMLHSMAIMRLVNGVAHKGRYETECSIADKALEIGLPRMLVDLR 209
           +R+DL  DA+ SE +LAML+ MAI+RLVN V  K R +TE SIA+ A  IG+PR L+D+R
Sbjct: 91  YRKDLPDDAIHSEQMLAMLYCMAILRLVNCVVEKTRKKTEVSIAEAAGAIGIPRTLIDIR 150

Query: 210 HEASH*DLPSLWLVQLASVKVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELAF 389
           HE SH DLP+L LV+ ++VK ++W+KSYYWEPQ   I  QRD    +RK++KSK  ELA 
Sbjct: 151 HEGSHRDLPALALVRDSAVKAIDWLKSYYWEPQTKQIPFQRDGSADIRKEIKSKFCELAS 210

Query: 390 YLNTNESSQLGSLPMKRKRSKQS 458
            L   +S+Q GS  +K KRSK++
Sbjct: 211 CLKVKKSTQPGSSAIKAKRSKKN 233


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