BLASTX nr result

ID: Coptis24_contig00006517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006517
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950...   140   5e-31
ref|XP_002523324.1| conserved hypothetical protein [Ricinus comm...   121   3e-25
ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|2...   121   4e-25
gb|ADN33748.1| hypothetical protein [Cucumis melo subsp. melo]        109   1e-21
emb|CBI23018.3| unnamed protein product [Vitis vinifera]              104   5e-20

>ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950 [Vitis vinifera]
           gi|147794098|emb|CAN71155.1| hypothetical protein
           VITISV_030317 [Vitis vinifera]
           gi|297745486|emb|CBI40566.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  140 bits (354), Expect = 5e-31
 Identities = 97/239 (40%), Positives = 125/239 (52%), Gaps = 13/239 (5%)
 Frame = +1

Query: 154 MGFEAVPEPSSTPKISYFSLPSQXXXXXXXXXXXXXXXSSIPFFWEEAPGKPRXXXXXXX 333
           MG +A  +PS  PK+  FS+  Q               +S+PF WEE PGKPR       
Sbjct: 1   MGSQAESDPSYAPKLPLFSIAMQEPEPSGTQTPPLQTTASVPFRWEEEPGKPR-----PC 55

Query: 334 XXXXXFSKPSSARCLELPPRLL-SEVKSTNMPSPSTVLDGPYIARSVSHSAVF--ARERL 504
                 SK SSARCL+ PPRL  S+VK + MPSP+TVL+GPY+ARS    + F  AR+R 
Sbjct: 56  TALVALSKSSSARCLDPPPRLFSSDVKLSKMPSPTTVLEGPYVARSAFQCSSFRVARDRR 115

Query: 505 ASFQELGSISKRRESK----EKGYFAAWGRKSTKRSTRVCED-SCAISSCPSSLG----G 657
            SF   GS  + +        +G+F  WGRK+ K              S P++ G    G
Sbjct: 116 HSFGRGGSPERGQLGAMVLGRRGFFGGWGRKNHKGKREASRSLDLEEGSSPATTGDYDSG 175

Query: 658 AGDSEDITKVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPW-RSRKTRKDG 831
            G SE     K+TR  R+G   +LS +R  SH WAS+Y   KQVV  PW RS+K +KDG
Sbjct: 176 GGSSE-----KMTRMSRSGRYLSLSQAR--SHFWASVYEGLKQVV--PWKRSKKLKKDG 225


>ref|XP_002523324.1| conserved hypothetical protein [Ricinus communis]
           gi|223537412|gb|EEF39040.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score =  121 bits (304), Expect = 3e-25
 Identities = 94/250 (37%), Positives = 118/250 (47%), Gaps = 23/250 (9%)
 Frame = +1

Query: 154 MGFEAVPEPSSTPKISYFSLPSQXXXXXXXXXXXXXXXSS--IPFFWEEAPGKPRXXXXX 327
           MG EA  E SSTP++  F  P                 SS  +PF WEE PGKPR     
Sbjct: 1   MGSEAEAEDSSTPRLPLFLKPPYVQSPQRSGMLTPPLYSSAAVPFRWEEEPGKPRECSGA 60

Query: 328 XXXXXXXFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARS----VSHSAVFAR 495
                       S +CLELPPRLL E   + +PSP+TVLDGPY  RS     S   +  R
Sbjct: 61  ITTPTDL-----SPKCLELPPRLLLEANVSKLPSPTTVLDGPYTGRSSRFQSSSFRMIRR 115

Query: 496 ERLASF--------QELGSISKRRESKEKGYFAA--WGRKSTKRSTRVCEDSCAISSCPS 645
           E   SF        Q    +  +R  K++G+  +  WGR+  K    V   S    S  S
Sbjct: 116 ECYGSFRTCSPERDQFTALVLSKRGIKDRGFLGSWRWGRRGFKGKREVAGASYVFPS--S 173

Query: 646 SL-----GGAGDSEDIT--KVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPW 804
           S+      G  + ++I+   V ITR RR+GS     S+   SH WA+IY   KQVV  PW
Sbjct: 174 SMDREVEDGNEEEKEISSKNVTITRIRRSGSF----STSSRSHFWATIYEGLKQVV--PW 227

Query: 805 RSRKTRKDGF 834
           RS K +KDGF
Sbjct: 228 RSGKLKKDGF 237


>ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|222868988|gb|EEF06119.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  121 bits (303), Expect = 4e-25
 Identities = 88/228 (38%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
 Frame = +1

Query: 145 DRKMGFEAVPEPSSTPKISYFSLPSQXXXXXXXXXXXXXXX-SSIPFFWEEAPGKPRXXX 321
           D ++G++    PS TPK+S FSL S+                +S+PF WEEAPGKPR   
Sbjct: 5   DDQLGYD----PSPTPKLSLFSLSSKLHESPAGMLTPPIHTLASVPFKWEEAPGKPRPSC 60

Query: 322 XXXXXXXXXFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARSVSHSAVFARER 501
                     SKP  ARCLELPPRLL+E K +NMPSP+TV DGPY+ RS+S   +     
Sbjct: 61  ATQ-------SKPKFARCLELPPRLLNEAKVSNMPSPTTVFDGPYLPRSLS---LGKGRS 110

Query: 502 LASFQELGSISKRRESKEKGYFAA--WG--RKSTKRSTRVCEDSCAISSCPSSLGGAGDS 669
           L++ + LG       SKE+  F +  WG  RK+ K            +     +G     
Sbjct: 111 LSNLENLG--CGEVNSKERVTFGSGRWGFFRKNNKE---------VAAPSHGDIGVNHGG 159

Query: 670 EDITKVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPWRSR 813
            +  +VKITR RR  S   LS +R  SH W  I  +FK  V  PW  R
Sbjct: 160 REAVRVKITRIRRRSSFLGLSHTR--SHFWTDICESFKHAV--PWTRR 203


>gb|ADN33748.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 234

 Score =  109 bits (273), Expect = 1e-21
 Identities = 78/233 (33%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
 Frame = +1

Query: 154 MGFEAVPEPSSTP-KISYFSLPSQXXXXXXXXXXXXXXXSSIPFFWEEAPGKPRXXXXXX 330
           M F     PSSTP K+S FSLP Q                S+PF WEEAPGKPR      
Sbjct: 1   MRFVTGENPSSTPPKLSLFSLPRQPPEPPGMVTPPLHASISVPFQWEEAPGKPRPFGIIE 60

Query: 331 XXXXXXFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARSVSHSAVF----ARE 498
                  SKP SAR L+LPPRL ++ K  +  SP+T +D P   R +S S  F       
Sbjct: 61  PN-----SKPKSARSLDLPPRLFADAKVAHFASPTTAVDEPIFGRDLSSSLSFRFPDTWA 115

Query: 499 RLASFQELGSISKRRESKEKGYFAAWGRKSTKRSTRVCEDSCAISSCPSSLGGAGDSEDI 678
                    + +  RE K+  Y  +    S +++  + +    I+         G S+  
Sbjct: 116 ETVRATATATATGTREGKDGKYVGSRRWMSFRKNKEIPKSGSEIAVTGGGDRNVGSSDGE 175

Query: 679 TKVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPWRSRKTRKDGFS 837
           T+VKITRFR   S F   +S+  SH  A+IYG+ KQ +   WR +    +  S
Sbjct: 176 TRVKITRFRSRRSFFRKPNSK--SHFIANIYGSLKQAI--SWRRKGDEMENIS 224


>emb|CBI23018.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  104 bits (259), Expect = 5e-20
 Identities = 75/206 (36%), Positives = 103/206 (50%)
 Frame = +1

Query: 142 RDRKMGFEAVPEPSSTPKISYFSLPSQXXXXXXXXXXXXXXXSSIPFFWEEAPGKPRXXX 321
           +D++MG +    P S+PK+  +SLP +                S+PF WEEAPGKPR   
Sbjct: 2   KDQEMGSDQFL-PISSPKLPIYSLPVKKEEPPGMLTPPLQAAVSVPFEWEEAPGKPRAWN 60

Query: 322 XXXXXXXXXFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARSVSHSAVFARER 501
                      K  SARCL+LPPR+ + VK +++ SP+TVL+GPY+ RSVS      +  
Sbjct: 61  RG--------EKARSARCLDLPPRMSARVKISDVCSPTTVLEGPYVGRSVSFGNGGGKSD 112

Query: 502 LASFQELGSISKRRESKEKGYFAAWGRKSTKRSTRVCEDSCAISSCPSSLGGAGDSEDIT 681
            A  +     S+    KE G           R   V E   ++++     GG G+ E  T
Sbjct: 113 GAKERSRFGSSRWMSLKENGEVGG------VRGGDVEEPGGSVAA-----GGGGEKE--T 159

Query: 682 KVKITRFRRTGSLFNLSSSRPHSHLW 759
           KVKITR  R GS   +SS+R  SHLW
Sbjct: 160 KVKITRMTRKGSFLGMSSTR--SHLW 183