BLASTX nr result

ID: Coptis24_contig00006513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006513
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26057.3| unnamed protein product [Vitis vinifera]              158   1e-36
ref|XP_002332253.1| predicted protein [Populus trichocarpa] gi|2...   149   4e-34
ref|XP_002870207.1| hypothetical protein ARALYDRAFT_493302 [Arab...   131   2e-28
ref|XP_003609675.1| hypothetical protein MTR_4g119920 [Medicago ...   129   8e-28
ref|NP_193317.6| uncharacterized protein [Arabidopsis thaliana] ...   127   2e-27

>emb|CBI26057.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  158 bits (400), Expect = 1e-36
 Identities = 83/170 (48%), Positives = 118/170 (69%), Gaps = 5/170 (2%)
 Frame = +1

Query: 4   VVRESKEELVEPRDSNKMKTKSSPIPKTNVQFKEVVDNARDKQEYIENDAWWLSLPYALA 183
           + +E++  + +P +++  +  SS   K  V  K+V   +RDK   I+ D WWL LP  +A
Sbjct: 471 LTKENQNTVTKP-NADLSRNGSSNCRK--VGSKQVAKGSRDKSSDIKADLWWLHLPCVIA 527

Query: 184 ILLRRSSESDGPGGLYSLKM-----DDGSPSYIVAFEDQRDASNFCYILEAFFDELGDLK 348
           +L++R S  +  GGLY+LK      D    SY VAFED+ DA+NFCY+LE+FF+ELGD  
Sbjct: 528 VLMQRGSNHEEQGGLYTLKTTSHESDPIDSSYTVAFEDRGDATNFCYLLESFFEELGDFS 587

Query: 349 ADVVPLSIKELRDEVETMTMKIIVLRKGQLQLYAGQPLVDVEMTLRTLIK 498
           AD+VPLSIKEL + V++  MK+IV++KGQLQLYAGQPL DVEM +R+L++
Sbjct: 588 ADIVPLSIKELHEAVKSDGMKVIVVKKGQLQLYAGQPLADVEMAMRSLVE 637


>ref|XP_002332253.1| predicted protein [Populus trichocarpa] gi|222832018|gb|EEE70495.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  149 bits (377), Expect = 4e-34
 Identities = 70/131 (53%), Positives = 98/131 (74%), Gaps = 5/131 (3%)
 Frame = +1

Query: 124 DKQEYIENDAWWLSLPYALAILLRRSSESDGPGGLYSLKM-----DDGSPSYIVAFEDQR 288
           DKQ  ++ D WW +LPY LAIL+RR SE +  GGLY+L++       G  SY +AFED+ 
Sbjct: 430 DKQSDVQKDLWWSNLPYVLAILMRRGSEHEESGGLYALRVASQADQHGDFSYTIAFEDRG 489

Query: 289 DASNFCYILEAFFDELGDLKADVVPLSIKELRDEVETMTMKIIVLRKGQLQLYAGQPLVD 468
           DA+NFCY+LE+FF++LGD  AD+VPL IKEL D V++ + K+IV+++GQL+LYAGQP  +
Sbjct: 490 DANNFCYLLESFFEDLGDFSADIVPLQIKELHDAVKSHSKKVIVVKRGQLKLYAGQPFSE 549

Query: 469 VEMTLRTLIKQ 501
           VE  L +L++Q
Sbjct: 550 VETALYSLLEQ 560


>ref|XP_002870207.1| hypothetical protein ARALYDRAFT_493302 [Arabidopsis lyrata subsp.
           lyrata] gi|297316043|gb|EFH46466.1| hypothetical protein
           ARALYDRAFT_493302 [Arabidopsis lyrata subsp. lyrata]
          Length = 475

 Score =  131 bits (329), Expect = 2e-28
 Identities = 66/133 (49%), Positives = 89/133 (66%), Gaps = 5/133 (3%)
 Frame = +1

Query: 118 ARDKQEYIENDAWWLSLPYALAILLRRSSESDGPGGLYSLKMD-----DGSPSYIVAFED 282
           AR+KQ   EN  WWL LPY L IL+R + + D   G ++L+ +     +G  SY++AFED
Sbjct: 341 AREKQSEKENKMWWLKLPYVLRILMRSNIDQDISEGFFTLRTESMEQNEGQVSYMIAFED 400

Query: 283 QRDASNFCYILEAFFDELGDLKADVVPLSIKELRDEVETMTMKIIVLRKGQLQLYAGQPL 462
           Q DA NF Y+LE+ F++L D  AD+ P+S K+L DEV +    +IV+RK QL LYAGQP 
Sbjct: 401 QSDARNFSYLLESVFEDLDDFIADIAPVSTKDLYDEVSSGDKNVIVVRKRQLTLYAGQPF 460

Query: 463 VDVEMTLRTLIKQ 501
            DVE  LRTLI++
Sbjct: 461 EDVERALRTLIQE 473


>ref|XP_003609675.1| hypothetical protein MTR_4g119920 [Medicago truncatula]
           gi|355510730|gb|AES91872.1| hypothetical protein
           MTR_4g119920 [Medicago truncatula]
          Length = 564

 Score =  129 bits (323), Expect = 8e-28
 Identities = 66/136 (48%), Positives = 93/136 (68%), Gaps = 6/136 (4%)
 Frame = +1

Query: 112 DNARDKQEYIENDAWWLSLPYALAILLRRSSESDGPGGLYSLKM-----DDGSPSYIVAF 276
           + A+ KQE  + D WWL+L Y L IL++R S  +G  GLYSL       +    SY VAF
Sbjct: 424 NKAKVKQEKSKTDIWWLNLRYVLVILMQRGSNGEGHKGLYSLNFTSKEREQNDDSYTVAF 483

Query: 277 EDQRDASNFCYILEAFFDELGD-LKADVVPLSIKELRDEVETMTMKIIVLRKGQLQLYAG 453
           ED  DA+NFC++LE++F++LGD   A+ VP+SI+EL +E+     K++V++K QLQLYAG
Sbjct: 484 EDPADANNFCFLLESYFEDLGDNFSANAVPMSIQELNEEIIFHGEKVVVVKKRQLQLYAG 543

Query: 454 QPLVDVEMTLRTLIKQ 501
           Q L DVEM L ++I+Q
Sbjct: 544 QLLTDVEMALCSIIEQ 559


>ref|NP_193317.6| uncharacterized protein [Arabidopsis thaliana]
           gi|332658256|gb|AEE83656.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 460

 Score =  127 bits (319), Expect = 2e-27
 Identities = 63/133 (47%), Positives = 89/133 (66%), Gaps = 5/133 (3%)
 Frame = +1

Query: 118 ARDKQEYIENDAWWLSLPYALAILLRRSSESDGPGGLYSLKMD-----DGSPSYIVAFED 282
           A++KQ   EN  WWL LPY L IL+R + + D   G ++L+ +     +G  S+++AFED
Sbjct: 326 AKEKQSEKENKLWWLKLPYVLRILMRSNIDQDISEGYFTLRTESMEQNEGQVSHMIAFED 385

Query: 283 QRDASNFCYILEAFFDELGDLKADVVPLSIKELRDEVETMTMKIIVLRKGQLQLYAGQPL 462
           Q DA NF Y+LE+ F++L D  AD+ P++ K+L DEV +    +IV+RK QL LYAGQP 
Sbjct: 386 QSDARNFSYLLESVFEDLDDFSADIAPVTTKDLYDEVSSGGKNVIVVRKRQLTLYAGQPF 445

Query: 463 VDVEMTLRTLIKQ 501
            DVE  LRTLI++
Sbjct: 446 EDVERALRTLIQE 458


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