BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006498
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...    99   6e-19
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               67   2e-09

>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 50/65 (76%), Positives = 53/65 (81%)
 Frame = -3

Query: 197 MDAGNTSSTGVVVPNHSGFMSIKLDRTNYSLWLAQIVPVLKSKTLMGFVDGTKPSPSEFK 18
           M+A N SSTGVVVP+HSGFMSIKLDRTNY LWLAQIVP+LKSK LMGFV GT P P EFK
Sbjct: 1   MEAIN-SSTGVVVPSHSGFMSIKLDRTNYPLWLAQIVPILKSKNLMGFVTGTNPCPPEFK 59

Query: 17  RGATG 3
               G
Sbjct: 60  SNTDG 64


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/60 (55%), Positives = 41/60 (68%)
 Frame = -3

Query: 182 TSSTGVVVPNHSGFMSIKLDRTNYSLWLAQIVPVLKSKTLMGFVDGTKPSPSEFKRGATG 3
           +SS+    P+ S F++IKLDRTNY LWLAQI P+LKS+ L GFVDGT   P  F +   G
Sbjct: 3   SSSSTENTPSVSNFLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLKDKAG 62