BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006496
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]   115   2e-24
emb|CBI26021.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [S...    96   2e-17
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    92   8e-17
emb|CAE54540.1| OSJNBa0018M05.22 [Oryza sativa Japonica Group]         87   9e-15

>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score =  115 bits (289), Expect(2) = 2e-24
 Identities = 109/359 (30%), Positives = 162/359 (45%), Gaps = 10/359 (2%)
 Frame = -2

Query: 1049 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 870
            I+SLL +KEAVRT ILS+RWR +W        T + +++      A  +  GDC      
Sbjct: 1331 IISLLPLKEAVRTGILSKRWRSIW--------TCHSELWF---DAASVLGIGDCSXSMSG 1379

Query: 869  HCFRQPSKCLGFERHKFVGFVLQILHLDHSCVR-DSFRLRFYLEKDFAHPCNQWMDMAIA 693
            +   QP      +  KFV  V Q ++      + +SF + F L K+F             
Sbjct: 1380 N---QPELNSQMQSXKFVERVDQFMYYRSQGPKINSFSIHFPLGKEFMS----------- 1425

Query: 692  QIKDFTHHIDQWIEMAIAKRSQTPDIGLSHFVILREIYRDGNL-----YYQFPS-LFSNH 531
                   HIDQWI  A+ K  +  D+ LS +     + RD         Y+FP  LFS  
Sbjct: 1426 -------HIDQWITCAVMKGVENIDLDLSEYFSFN-LKRDDTSSTAFQIYEFPCRLFSVP 1477

Query: 530  EIGSSIKCLSLKGCSFRSLDSKG-YCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFLSH 354
                ++K L L  C   +L S     SLI + L+ V I    +  +LS C +LE+L L  
Sbjct: 1478 GGRCTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLERLSLCV 1537

Query: 353  CQTLRSLKISGPKLKLKHLIVFFCFXXXXXXXXXXXXXTFLYSGKLIKFTPINVPKLSNV 174
            C  L +L  S   L+LK L +  CF             TF Y G L  F+  NVPKL+  
Sbjct: 1538 CNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFKNVPKLAKA 1597

Query: 173  VIRTGLEYS-CHALSYARGNLSSDFPQMESL-MLSIAPIEEKKIPKRLTLFANLKKLVL 3
             +   ++ S    + YA      D PQ+E+L +LS+  +++ ++P+    F N+K+  L
Sbjct: 1598 SLEFFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFTNIKQFEL 1656



 Score = 24.3 bits (51), Expect(2) = 2e-24
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -3

Query: 1249 KGVVCNSLFASNMAVKRIKKKPKISR--DRISVLPDDMLSFILSLL 1118
            +G   ++L  + M  +R  K  K+ R  D +  LPDD+LS I+SLL
Sbjct: 1291 RGFFTDNLKGNRMG-RRGCKAAKLVRGEDWLVELPDDILSTIISLL 1335


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  115 bits (288), Expect(2) = 4e-24
 Identities = 110/359 (30%), Positives = 162/359 (45%), Gaps = 10/359 (2%)
 Frame = -2

Query: 1049 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 870
            I+SLL +KEAVRT ILS+RWR +W        T + +++      A  +  GDC T    
Sbjct: 29   IISLLPLKEAVRTGILSKRWRSIW--------TCHSELWF---DAASVLGIGDCSTSMSG 77

Query: 869  HCFRQPSKCLGFERHKFVGFVLQILHLDHSCVR-DSFRLRFYLEKDFAHPCNQWMDMAIA 693
            +   QP      +  KFV  V Q ++      + +SF + F L K+F             
Sbjct: 78   N---QPELNSQMQSSKFVERVDQFMYYRSQGRKINSFSIHFPLGKEFMS----------- 123

Query: 692  QIKDFTHHIDQWIEMAIAKRSQTPDIGLSHFVILREIYRDGNL-----YYQFPS-LFSNH 531
                   HIDQWI  A+ K  +  D+ LS +     + RD         Y+FP  LFS  
Sbjct: 124  -------HIDQWITCAVMKGVENIDLDLSEYFSFN-LKRDDTSSTAFQIYEFPCRLFSVP 175

Query: 530  EIGSSIKCLSLKGCSFRSLDSKG-YCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFLSH 354
                ++K L L  C   +L S     SLI + L+ V I    +  +LS C +LE L L  
Sbjct: 176  GGRCTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLEWLSLCV 235

Query: 353  CQTLRSLKISGPKLKLKHLIVFFCFXXXXXXXXXXXXXTFLYSGKLIKFTPINVPKLSNV 174
            C  L +L  S   L+LK L +  CF             TF Y G L  F+  NVPKL+  
Sbjct: 236  CNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFKNVPKLAKA 295

Query: 173  VIRTGLEYS-CHALSYARGNLSSDFPQMESL-MLSIAPIEEKKIPKRLTLFANLKKLVL 3
             +   ++ S    + YA      D PQ+E+L +LS+  +++ ++P+    F N+K+  L
Sbjct: 296  SLEFFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFTNVKQFEL 354



 Score = 23.5 bits (49), Expect(2) = 4e-24
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 1171 DRISVLPDDMLSFILSLL 1118
            D +  LPDD+LS I+SLL
Sbjct: 16   DWLVELPDDILSTIISLL 33


>ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [Sorghum bicolor]
            gi|241933225|gb|EES06370.1| hypothetical protein
            SORBIDRAFT_04g005220 [Sorghum bicolor]
          Length = 494

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 101/359 (28%), Positives = 157/359 (43%), Gaps = 10/359 (2%)
 Frame = -2

Query: 1049 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 870
            ILSLL + +AVRTS+LS++ +++W+    S   LN D                  TG   
Sbjct: 10   ILSLLPINDAVRTSVLSRKLKHVWR----SHTNLNFD------------------TGTMR 47

Query: 869  HCFRQPSKCL--GFERHKFVGFVLQILHLDHSCVRDSFRLRFYLEKDFAHPCNQWMDMAI 696
              + +PSK    G + ++FV  V  ++   +    +  ++RF L    A           
Sbjct: 48   KGYFRPSKGYYSGLKDNEFVTRVDTVVQQHNGTGVEHMKIRFRLHSKHAD---------- 97

Query: 695  AQIKDFTHHIDQWIEMAIAKRSQTPDIGLS------HFVILREIYRD-GNLYYQFPSLFS 537
                    HID W+ +AIA +++   I LS       F+    I R  G   Y FPS F 
Sbjct: 98   --------HIDSWVSVAIASKTKEFVINLSGGSRGIFFLRGGRIRRMVGEEPYSFPSQFF 149

Query: 536  NHEIGSSIKCLSLKGCSFR-SLDSKGYCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFL 360
            +    S ++CL L   S +   D KG  +L  L L +V I  + +  ILS C  LE L +
Sbjct: 150  SPNNCSHLRCLELWSVSLQLPSDFKGCLNLKSLTLVDVSITDEDVQCILSTCNLLEFLEI 209

Query: 359  SHCQTLRSLKISGPKLKLKHLIVFFCFXXXXXXXXXXXXXTFLYSGKLIKFTPINVPKLS 180
            S+C  + S+++  P  +L HL+V  C              TF YSG+ +     +  +L+
Sbjct: 210  SYCSMVTSIRMLHPLDRLMHLVVDIC-RKLQEIELNCSLTTFQYSGRTVPLKFASTSRLT 268

Query: 179  NVVIRTGLEYSCHALSYARGNLSSDFPQMESLMLSIAPIEEKKIPKRLTLFANLKKLVL 3
            N+ +    + S  ALSY      S  P++E+L L     E   +P+    F  L+ L L
Sbjct: 269  NINVVFLTDQS--ALSYMVTGFPSTSPRLETLTLYCYEHERTLVPEGPFKFTCLRDLRL 325


>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 464

 Score = 92.0 bits (227), Expect(2) = 8e-17
 Identities = 93/289 (32%), Positives = 122/289 (42%)
 Frame = -2

Query: 1049 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 870
            ILS LT+KEA RTSILS RWR+LW                        MDF D     +Y
Sbjct: 46   ILSRLTMKEAARTSILSTRWRHLWTYYTGI------------------MDF-DASLTMWY 86

Query: 869  HCFRQPSKCLGFERHKFVGFVLQILHLDHSCVRDSFRLRFYLEKDFAHPCNQWMDMAIAQ 690
                  SK L  ERH FV +V Q+L        +  R+ F L+                 
Sbjct: 87   LQLGLGSKSLDMERHSFVSWVNQVLRSHEGPTMEGLRICFDLD----------------- 129

Query: 689  IKDFTHHIDQWIEMAIAKRSQTPDIGLSHFVILREIYRDGNLYYQFPSLFSNHEIGSSIK 510
              DF + ID WI +A+ KR +  +I L++  I   I   G+  Y FPS   N    SS+K
Sbjct: 130  -SDFMYEIDSWITIAMQKRVKRLEIDLTN--IEPSIKTTGS--YAFPSGLLNDSSFSSLK 184

Query: 509  CLSLKGCSFRSLDSKGYCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFLSHCQTLRSLK 330
             L L       +D  G        L+++L         LS CP LE L + +  +L SLK
Sbjct: 185  TLQL-----NMVDVTGEA------LQHLL---------LSWCPLLEVLSIVNSTSLVSLK 224

Query: 329  ISGPKLKLKHLIVFFCFXXXXXXXXXXXXXTFLYSGKLIKFTPINVPKL 183
            +SG  LKLK+L +  C              +F Y G LI     +VP L
Sbjct: 225  VSGSSLKLKYLEMVCCNNLKYLEITAASLVSFKYYGPLIGLPFKSVPNL 273



 Score = 22.3 bits (46), Expect(2) = 8e-17
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 1171 DRISVLPDDMLSFILSLLT 1115
            + IS LP+D+L  ILS LT
Sbjct: 33   EHISQLPEDVLLNILSRLT 51


>emb|CAE54540.1| OSJNBa0018M05.22 [Oryza sativa Japonica Group]
          Length = 517

 Score = 87.0 bits (214), Expect = 9e-15
 Identities = 91/362 (25%), Positives = 147/362 (40%), Gaps = 13/362 (3%)
 Frame = -2

Query: 1049 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 870
            ILS L + +A+RTS+LS++W+Y W     S   L L+  + R               K Y
Sbjct: 35   ILSQLPINDAIRTSVLSRKWKYFW----CSHTNLTLNKGTMR---------------KPY 75

Query: 869  HCFRQPSKCLGFERHKFVGFVLQILHLDHSCVRDSFRLRFYLEKDFAHPCNQWMDMAIAQ 690
                 P +      ++F+  V  +L            ++F L    A             
Sbjct: 76   VKTLTPYRWRWLRDYEFITRVDAVLRQHSGMGVQRMEIKFRLHSKHA------------- 122

Query: 689  IKDFTHHIDQWIEMAIAKRSQTPDIGLS------------HFVILREIYRDGNLYYQFPS 546
                  HID+W+  AIA +++   + LS            H   +R I       Y  P 
Sbjct: 123  -----DHIDRWVNFAIASKTKELVVDLSGQDKGSFFTDLTHSNCIRIIKEPP---YNLPP 174

Query: 545  LFSNHEIGSSIKCLSLKGCSFR-SLDSKGYCSLIDLRLKNVLIVKDTIVSILSECPNLEK 369
                   GS ++CL L   S +   D KG+  L  L L ++ I  + +  +LS+C  LE 
Sbjct: 175  QLLGLNYGSYLRCLELTTVSLQLPADFKGFLDLKILSLVDMSITDEDVQRMLSKCNLLEF 234

Query: 368  LFLSHCQTLRSLKISGPKLKLKHLIVFFCFXXXXXXXXXXXXXTFLYSGKLIKFTPINVP 189
            L +S+C+ + S+++  P  +LKHL+V  C              T  YSG ++     +  
Sbjct: 235  LEISYCEMVTSIRMLHPLDRLKHLVVDIC-PNLQEIELNCSPTTLKYSGTMVPLIFASTS 293

Query: 188  KLSNVVIRTGLEYSCHALSYARGNLSSDFPQMESLMLSIAPIEEKKIPKRLTLFANLKKL 9
            +L+N+ I   + Y   A+SY      S  P++E+L L     E   +P+    F  L+ L
Sbjct: 294  RLTNISI-VFINYQ-SAISYIITGFPSTLPRLETLTLHCGERERTIVPEGPFKFTYLRNL 351

Query: 8    VL 3
             L
Sbjct: 352  RL 353