BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006472
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526275.1| eukaryotic translation initiation factor 2c,...   189   4e-46
ref|XP_002318338.1| argonaute protein group [Populus trichocarpa...   188   5e-46
dbj|BAJ34113.1| unnamed protein product [Thellungiella halophila]     186   3e-45
gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]                177   1e-42
gb|AAF79718.1|AC020889_26 T1N15.2 [Arabidopsis thaliana]              176   3e-42

>ref|XP_002526275.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223534406|gb|EEF36112.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 1063

 Score =  189 bits (479), Expect = 4e-46
 Identities = 108/199 (54%), Positives = 124/199 (62%), Gaps = 2/199 (1%)
 Frame = -1

Query: 591 GPPPEYQGRGAQPQGVPIQQPAGHVLESGVXXXXXXXXXXXXXXXXXXXXXXXXXPELHQ 412
           G  PEYQGRG  P             + G                          PELHQ
Sbjct: 78  GGGPEYQGRGRGPPQ-----------QGGRGGYGGGRSSSNRGGPPSVGPSRPPVPELHQ 126

Query: 411 AT--PHQATVAPDEPXXXXXXXXXSPELNPPLVVDQFQQLSIQSGGTSTQAFQPVAPSSK 238
           AT  P+QA V+P             PE +P +V  Q Q+LSIQ   +S+Q  Q   PSSK
Sbjct: 127 ATLAPYQAGVSPQLMPSEGSSSSGPPEPSPVVVAQQMQELSIQQEVSSSQPIQAPPPSSK 186

Query: 237 TVRFPLRPGKGSSGMKCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMKKLVDL 58
           ++RFPLRPGKGS+G++CIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVM++LV L
Sbjct: 187 SMRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMEQLVKL 246

Query: 57  YKVSHLGKRLPAYDGRKSL 1
           Y+ SHLGKRLPAYDGRKSL
Sbjct: 247 YRESHLGKRLPAYDGRKSL 265


>ref|XP_002318338.1| argonaute protein group [Populus trichocarpa]
           gi|222859011|gb|EEE96558.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1062

 Score =  188 bits (478), Expect = 5e-46
 Identities = 109/199 (54%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
 Frame = -1

Query: 591 GPPPEYQGRGAQPQGVPIQQPAGHVLESGVXXXXXXXXXXXXXXXXXXXXXXXXXPELHQ 412
           G  PEYQGRG   +G P Q   G+                               PELHQ
Sbjct: 80  GGAPEYQGRG---RGQPQQGGRGY----------GGGRPGGGRGGPSSGGFRPPAPELHQ 126

Query: 411 ATP--HQATVAPDEPXXXXXXXXXSPELNPPLVVDQFQQLSIQSGGTSTQAFQPVAPSSK 238
           ATP  + A V               PE +   V  Q QQLS++  G+S+QA QP+  SSK
Sbjct: 127 ATPAPYPAVVTTQPTPSEASSSMRPPEPSLATVSQQLQQLSVEQEGSSSQAIQPLPASSK 186

Query: 237 TVRFPLRPGKGSSGMKCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMKKLVDL 58
           +VRFPLRPGKGS+G++CIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVM++LV L
Sbjct: 187 SVRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMEQLVKL 246

Query: 57  YKVSHLGKRLPAYDGRKSL 1
           Y+ SHLGKRLPAYDGRKSL
Sbjct: 247 YRESHLGKRLPAYDGRKSL 265


>dbj|BAJ34113.1| unnamed protein product [Thellungiella halophila]
          Length = 1084

 Score =  186 bits (471), Expect = 3e-45
 Identities = 95/141 (67%), Positives = 106/141 (75%)
 Frame = -1

Query: 423 ELHQATPHQATVAPDEPXXXXXXXXXSPELNPPLVVDQFQQLSIQSGGTSTQAFQPVAPS 244
           ELHQAT         +P          PE  PP+ V QF+QL+I+ G  S QA QP+  S
Sbjct: 151 ELHQATSPAYQAVSSQPASSEASPIQMPE--PPVPVQQFEQLTIEQGAPS-QAIQPIPSS 207

Query: 243 SKTVRFPLRPGKGSSGMKCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMKKLV 64
           SK  +FP+RPGKG  G +CIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMK+LV
Sbjct: 208 SKAYKFPMRPGKGQVGKRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMKQLV 267

Query: 63  DLYKVSHLGKRLPAYDGRKSL 1
           DLY+VSHLGKRLPAYDGRKSL
Sbjct: 268 DLYRVSHLGKRLPAYDGRKSL 288


>gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]
          Length = 1052

 Score =  177 bits (449), Expect = 1e-42
 Identities = 95/145 (65%), Positives = 106/145 (73%), Gaps = 4/145 (2%)
 Frame = -1

Query: 423 ELHQAT--PHQATV--APDEPXXXXXXXXXSPELNPPLVVDQFQQLSIQSGGTSTQAFQP 256
           ELHQAT  PHQ      P E           PE     V  QFQQL +Q    +TQA QP
Sbjct: 113 ELHQATQTPHQPVPYGRPSETYSEAGSSSQPPEPTTQQVTQQFQQLVVQPEAAATQAIQP 172

Query: 255 VAPSSKTVRFPLRPGKGSSGMKCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVM 76
              SSK++RFPLRPGKGS+G++CIVKANHFFAELPDKDLHQYDV+ITPEV SRGVNRAVM
Sbjct: 173 A--SSKSMRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVSITPEVASRGVNRAVM 230

Query: 75  KKLVDLYKVSHLGKRLPAYDGRKSL 1
           ++LV LY+ SHLGKRLPAYDGRKSL
Sbjct: 231 EQLVKLYRESHLGKRLPAYDGRKSL 255


>gb|AAF79718.1|AC020889_26 T1N15.2 [Arabidopsis thaliana]
          Length = 1123

 Score =  176 bits (446), Expect = 3e-42
 Identities = 90/141 (63%), Positives = 102/141 (72%)
 Frame = -1

Query: 423 ELHQATPHQATVAPDEPXXXXXXXXXSPELNPPLVVDQFQQLSIQSGGTSTQAFQPVAPS 244
           ELHQAT         +P          PE  P ++  QF+QLS++ G  S QA QP+  S
Sbjct: 155 ELHQATSPTYQAVSSQPTLSEVSPTQVPE--PTVLAQQFEQLSVEQGAPS-QAIQPIPSS 211

Query: 243 SKTVRFPLRPGKGSSGMKCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMKKLV 64
           SK  +FP+RPGKG SG +CIVKANHFFAELPDKDLH YDVTITPEVTSRGVNRAVMK+LV
Sbjct: 212 SKAFKFPMRPGKGQSGKRCIVKANHFFAELPDKDLHHYDVTITPEVTSRGVNRAVMKQLV 271

Query: 63  DLYKVSHLGKRLPAYDGRKSL 1
           D Y+ SHLG RLPAYDGRKSL
Sbjct: 272 DNYRDSHLGSRLPAYDGRKSL 292