BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006469
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519707.1| PREDICTED: pentatricopeptide repeat-containi...   392   e-107
ref|NP_001241416.1| uncharacterized protein LOC100797399 [Glycin...   391   e-106
ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|1946...   391   e-106
ref|XP_003540735.1| PREDICTED: 60S ribosomal protein L7a-like [G...   391   e-106
ref|XP_002462637.1| hypothetical protein SORBIDRAFT_02g029380 [S...   391   e-106

>ref|XP_003519707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 554

 Score =  392 bits (1007), Expect = e-107
 Identities = 201/269 (74%), Positives = 212/269 (78%)
 Frame = -2

Query: 1051 HNLKTCLQKMAPKRGLKAPAXXXXXXXXXXXTNPLFEKRAKQFGIGGALPPKKDLHRFVK 872
            H        MAPK+G K              TNPLFEKR KQFGIGGALPPK+DL RFVK
Sbjct: 286  HTFSVATTTMAPKKGAKGGVVAAKKKVQEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVK 345

Query: 871  WPXXXXXXXXXXXXXXXXXVPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXX 692
            WP                 VPPALNQFTKTLDKNLATNLFKMLLKYRPED          
Sbjct: 346  WPKNVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAEKKERLLK 405

Query: 691  XXXAESEGKTVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKM 512
               AE++GK VE+KKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKM
Sbjct: 406  RAQAEADGKPVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKM 465

Query: 511  EIPYCIVKGKARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKW 332
            EIPYCIVKGKARLG IVHKKTASVLCLT+VKNEDKMEFS+ILEAIKANFNDKYDEYRKKW
Sbjct: 466  EIPYCIVKGKARLGTIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKW 525

Query: 331  GGGIMGSKSQAKTKAKERLIAKEAAQRMN 245
            GGGIMGSKSQAKT+AKE+L+AKEAAQRMN
Sbjct: 526  GGGIMGSKSQAKTRAKEKLLAKEAAQRMN 554


>ref|NP_001241416.1| uncharacterized protein LOC100797399 [Glycine max]
            gi|255638035|gb|ACU19332.1| unknown [Glycine max]
          Length = 260

 Score =  391 bits (1005), Expect = e-106
 Identities = 200/260 (76%), Positives = 212/260 (81%)
 Frame = -2

Query: 1024 MAPKRGLKAPAXXXXXXXXXXXTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXX 845
            MAPK+G+K              TNPLFEKR KQFGIGGALPPK+DL RFVKWP       
Sbjct: 1    MAPKKGVKGSVVAAKKKVQEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKNVQIQR 60

Query: 844  XXXXXXXXXXVPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXXXXXAESEGK 665
                      VPPALNQFTKTLDKNLATNLFKMLLKYRPED             AE++GK
Sbjct: 61   KKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAEKKERLLKRAQAEADGK 120

Query: 664  TVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 485
             VE+KKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG
Sbjct: 121  PVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 180

Query: 484  KARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKS 305
            KARLG IVHKKTASVLCLT+VKNEDKMEFS+ILEAIKANFNDKYDEYRKKWGGGIMGSKS
Sbjct: 181  KARLGTIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKS 240

Query: 304  QAKTKAKERLIAKEAAQRMN 245
            QAKT+AKE+L+AKEAAQRMN
Sbjct: 241  QAKTRAKEKLLAKEAAQRMN 260


>ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|194699752|gb|ACF83960.1|
            unknown [Zea mays] gi|195607614|gb|ACG25637.1| 60S
            ribosomal protein L7a [Zea mays]
            gi|414589924|tpg|DAA40495.1| TPA: 60S ribosomal protein
            L7a [Zea mays]
          Length = 258

 Score =  391 bits (1005), Expect = e-106
 Identities = 201/259 (77%), Positives = 213/259 (82%)
 Frame = -2

Query: 1024 MAPKRGLKAPAXXXXXXXXXXXTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXX 845
            MAPKRG +AP             NPLFEKR KQFGIGGALPPKKDLHRFVKWP       
Sbjct: 1    MAPKRGGRAPVPAKKKTDKVT--NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQR 58

Query: 844  XXXXXXXXXXVPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXXXXXAESEGK 665
                      VPPALNQFT+TLDKNLATNLFKMLLKYRPED             AE+EGK
Sbjct: 59   QRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAENEGK 118

Query: 664  TVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 485
            TVESKKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKG
Sbjct: 119  TVESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKG 178

Query: 484  KARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKS 305
            KARLG+IVHKKTASVLCLT+VKNEDK+EFSKILEAIKANFNDK+DE RKKWGGGIMGSKS
Sbjct: 179  KARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGIMGSKS 238

Query: 304  QAKTKAKERLIAKEAAQRM 248
            QAKTKA+E+L+AKEAAQRM
Sbjct: 239  QAKTKAREKLLAKEAAQRM 257


>ref|XP_003540735.1| PREDICTED: 60S ribosomal protein L7a-like [Glycine max]
          Length = 259

 Score =  391 bits (1004), Expect = e-106
 Identities = 200/260 (76%), Positives = 214/260 (82%)
 Frame = -2

Query: 1024 MAPKRGLKAPAXXXXXXXXXXXTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXX 845
            MAPKRG KAPA            NPLFEKR KQFGIGGALPPK+DL RFVKWP       
Sbjct: 1    MAPKRGGKAPALAAKKKPEKVS-NPLFEKRPKQFGIGGALPPKRDLTRFVKWPKNVQIQR 59

Query: 844  XXXXXXXXXXVPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXXXXXAESEGK 665
                      VPPALNQFTKTLDKNLAT+LFK+LLKYRPED             AE+EGK
Sbjct: 60   KKRILKQRLKVPPALNQFTKTLDKNLATSLFKLLLKYRPEDKAEKKERLLKRAQAEAEGK 119

Query: 664  TVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 485
            TVE+KKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG
Sbjct: 120  TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 179

Query: 484  KARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKS 305
            KARLG +VHKKTASVLCLT+VKNEDK+EFS++LEAIKANFNDKYDEYRKKWGGGIMGSKS
Sbjct: 180  KARLGTVVHKKTASVLCLTTVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKS 239

Query: 304  QAKTKAKERLIAKEAAQRMN 245
            QAKT+AKE+L+AKEAAQRMN
Sbjct: 240  QAKTRAKEKLLAKEAAQRMN 259


>ref|XP_002462637.1| hypothetical protein SORBIDRAFT_02g029380 [Sorghum bicolor]
            gi|242049790|ref|XP_002462639.1| hypothetical protein
            SORBIDRAFT_02g029400 [Sorghum bicolor]
            gi|241926014|gb|EER99158.1| hypothetical protein
            SORBIDRAFT_02g029380 [Sorghum bicolor]
            gi|241926016|gb|EER99160.1| hypothetical protein
            SORBIDRAFT_02g029400 [Sorghum bicolor]
          Length = 258

 Score =  391 bits (1004), Expect = e-106
 Identities = 201/259 (77%), Positives = 213/259 (82%)
 Frame = -2

Query: 1024 MAPKRGLKAPAXXXXXXXXXXXTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXX 845
            MAPKRG +AP             NPLFEKR KQFGIGGALPPKKDLHRFVKWP       
Sbjct: 1    MAPKRGGRAPVPAKKKTDKVV--NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQR 58

Query: 844  XXXXXXXXXXVPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXXXXXAESEGK 665
                      VPPALNQFT+TLDKNLATNLFKMLLKYRPED             AE+EGK
Sbjct: 59   QRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAETEGK 118

Query: 664  TVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 485
            TVE+KKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKG
Sbjct: 119  TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKG 178

Query: 484  KARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKS 305
            KARLG+IVHKKTASVLCLT+VKNEDK+EFSKILEAIKANFNDK+DE RKKWGGGIMGSKS
Sbjct: 179  KARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGIMGSKS 238

Query: 304  QAKTKAKERLIAKEAAQRM 248
            QAKTKA+E+LIAKEAAQRM
Sbjct: 239  QAKTKAREKLIAKEAAQRM 257