BLASTX nr result

ID: Coptis24_contig00006466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006466
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...   109   2e-22
ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...    99   5e-19
emb|CBI23880.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002303173.1| predicted protein [Populus trichocarpa] gi|2...    98   7e-19
ref|XP_003593097.1| Separin [Medicago truncatula] gi|355482145|g...    96   3e-18

>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
            separase, putative [Ricinus communis]
          Length = 2153

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
 Frame = +2

Query: 17   KIQKSMDHIELVMSSWWIQLNDAIYISVFLSNIGAEFYNREQMKEASDMLNLCCRSAWTC 196
            K+QKS+  ++ ++ S WIQ     Y+   L N+G   Y  +Q+ EAS  L L CR++WTC
Sbjct: 506  KLQKSVHVMKHILDSKWIQPQGLKYLFSSLYNLGIHLYRNKQVNEASKALKLSCRASWTC 565

Query: 197  I-----NNXXXXXXXXXXXXISHYVTKTCSRSGTLLLALHECGSTDLIEVVITTLSNWST 361
                                IS ++T+ C+R+  LL  +++CGS  L ++++  L NWS 
Sbjct: 566  AVLFCQMYMNKSNGDLSEDVISDFITEACTRTAFLLDIVYQCGSLKLKKIIVNGLENWSV 625

Query: 362  VANSFENLDGPTNLMRQWVKFVCKDYKDADTCDNAPLVYPRLSKYLK 502
              + F +L GP  L++QWVK  CK  K+ D  D A  +Y  LS   K
Sbjct: 626  AEDLFRSLPGPMPLVKQWVKIECKRIKNLDVDDEASTLYHLLSSSKK 672


>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
 Frame = +2

Query: 20   IQKSMDHIELVMSSWWIQLNDAIYISVFLSNIGAEFYNREQMKEASDMLNLCCRSAWTCI 199
            +QKS + I  V+S+ WIQL    ++ V L NIG   Y + Q+KEAS  + LCCR++W  +
Sbjct: 562  MQKSANFIRHVISNGWIQLQGLKFLFVNLHNIGVILYRKRQLKEASKAIKLCCRASWARV 621

Query: 200  N--------NXXXXXXXXXXXXISHYVTKTCSRSGTLLLALHECGSTDLIEVVITTLSNW 355
            +                     I+ +V + C  S  LL  +H+  S  +  +V+++L NW
Sbjct: 622  SFLCQMFLEKSKGLHDDLSEDAITDFVMEACKESSFLLDIVHQFDSGKVKSIVMSSLENW 681

Query: 356  STVANSFENLDGPTNLMRQWVKFVCKDYKD 445
            S  AN F  L  PT L++QWVK  CK  KD
Sbjct: 682  SAAANLFNMLPCPTALVKQWVKIECKLSKD 711


>emb|CBI23880.3| unnamed protein product [Vitis vinifera]
          Length = 2158

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
 Frame = +2

Query: 20  IQKSMDHIELVMSSWWIQLNDAIYISVFLSNIGAEFYNREQMKEASDMLNLCCRSAWTCI 199
           +QKS + I  V+S+ WIQL    ++ V L NIG   Y + Q+KEAS  + LCCR++W  +
Sbjct: 509 MQKSANFIRHVISNGWIQLQGLKFLFVNLHNIGVILYRKRQLKEASKAIKLCCRASWARV 568

Query: 200 N--------NXXXXXXXXXXXXISHYVTKTCSRSGTLLLALHECGSTDLIEVVITTLSNW 355
           +                     I+ +V + C  S  LL  +H+  S  +  +V+++L NW
Sbjct: 569 SFLCQMFLEKSKGLHDDLSEDAITDFVMEACKESSFLLDIVHQFDSGKVKSIVMSSLENW 628

Query: 356 STVANSFENLDGPTNLMRQWVKFVCKDYKD 445
           S  AN F  L  PT L++QWVK  CK  KD
Sbjct: 629 SAAANLFNMLPCPTALVKQWVKIECKLSKD 658


>ref|XP_002303173.1| predicted protein [Populus trichocarpa] gi|222840605|gb|EEE78152.1|
            predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 22/184 (11%)
 Frame = +2

Query: 17   KIQKSMDHIELVMSSWWIQLNDAIYISVFLSNIGAEFYNREQMKEASDMLNLCCRSAWTC 196
            K+QKS+  I+ +++S WIQ     YIS  L ++G   Y  +Q+ EA   L LCCR++W C
Sbjct: 533  KLQKSVHLIKQIIASEWIQPQGLKYISASLYSVGLLLYRNKQVNEALKPLKLCCRASWKC 592

Query: 197  I--------NNXXXXXXXXXXXXISHYVTKTCSRSGTLLLALHECGSTDLIEVVITTLSN 352
            +                      I  +VT+ C+++  LL  LH+ GS  + ++++ +L N
Sbjct: 593  VKLLSEMSMQKSEGFVGDLSEDAILDFVTEACNQTVFLLDVLHKSGSLRVKKIIVNSLEN 652

Query: 353  WSTVANSFENLDGPTNLMRQWVKFV--------------CKDYKDADTCDNAPLVYPRLS 490
            WS   + F  L GP  L++QWVK                C++ K+    D+AP +Y  LS
Sbjct: 653  WSVAEDLFRRLSGPVPLVKQWVKVASARFQLSSFNFQMQCENNKNMIVDDDAPTLYCLLS 712

Query: 491  KYLK 502
              ++
Sbjct: 713  SSMR 716


>ref|XP_003593097.1| Separin [Medicago truncatula] gi|355482145|gb|AES63348.1| Separin
            [Medicago truncatula]
          Length = 2216

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
 Frame = +2

Query: 17   KIQKSMDHIELVMSSWWIQLNDAIYISVFLSNIGAEFYNREQMKEASDMLNLCCRSAWTC 196
            K+Q+S   I+ +++S W+      YI   L NI   FY  +Q+KEAS +LNLCC+++W  
Sbjct: 536  KLQESTQLIKHIIASKWVDTGRLKYIINRLHNIFLVFYRNKQLKEASKVLNLCCKASWLF 595

Query: 197  INNXXXXXXXXXXXXISHYVTKTCSRSGTLLLALHECGSTDLIEVVITTLSNWSTVANSF 376
            I              +  +V    +RS  LL  L+E  +    + +I  L NWS   + F
Sbjct: 596  IKR---HCGNLSEGALKEFVNDDYTRSARLLDILYETDNLKTRKKLIKILKNWSIAKDMF 652

Query: 377  ENLDGPTNLMRQWVKFVCKDYKDADTCDNAPLVYPRL--SKYLKEKNFSTTI 526
            E L  P  +++QWVK  C+  KD D   ++P +Y  L  SK L ++N  T +
Sbjct: 653  EKLPTPIPVVKQWVKIECQRVKDVDGSVDSPSLYSLLLSSKELSKRNIGTIL 704


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