BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006464
         (1939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34075.3| unnamed protein product [Vitis vinifera]              565   e-158
ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266...   565   e-158
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...   478   e-132
gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]      466   e-128
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...   465   e-128

>emb|CBI34075.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  565 bits (1457), Expect = e-158
 Identities = 268/395 (67%), Positives = 325/395 (82%), Gaps = 4/395 (1%)
 Frame = -1

Query: 1177 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 998
            HHD++KERRKRKEFE+FVGGLDRD  E+D+   F QVG++TEVRLMKN +TQKNKGF F+
Sbjct: 173  HHDLVKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFI 232

Query: 997  RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 818
            RFATVEQARRA+NELKHP +NGKQCGV+PSQDSDTLFVGNICKTWTK   ++KL ++GVD
Sbjct: 233  RFATVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVD 292

Query: 817  KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 638
            K+E++TLVED KNEG+NRGFAFLDFS RADALEACKRLQK DVVFGTDR+A+VAFADTFI
Sbjct: 293  KYEDLTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFI 352

Query: 637  EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 458
            EPDDEIM+QVRT+FLDGLPA+WDEDR  +++KKFG++EK+ELARNMPAAKRTDFGF+TFD
Sbjct: 353  EPDDEIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFD 412

Query: 457  THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRTS 278
            THD+AVACVD +NN+EL DG + VKVRARLSRPRQRGKS++HA              +  
Sbjct: 413  THDSAVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAP 472

Query: 277  WDSS----DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSS 110
            W SS    DSW + GR GR MQ+   Y GG KRP+G R+R+ + +M P+R+ SRRR PS 
Sbjct: 473  WGSSSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSP 532

Query: 109  ERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDF 5
            E S+ RRSP   + +SS++REY++ DE + R + F
Sbjct: 533  ESSFGRRSP--VYEKSSTKREYIQRDESFSRPAVF 565


>ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266805 [Vitis vinifera]
          Length = 719

 Score =  565 bits (1457), Expect = e-158
 Identities = 268/395 (67%), Positives = 325/395 (82%), Gaps = 4/395 (1%)
 Frame = -1

Query: 1177 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 998
            HHD++KERRKRKEFE+FVGGLDRD  E+D+   F QVG++TEVRLMKN +TQKNKGF F+
Sbjct: 112  HHDLVKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFI 171

Query: 997  RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 818
            RFATVEQARRA+NELKHP +NGKQCGV+PSQDSDTLFVGNICKTWTK   ++KL ++GVD
Sbjct: 172  RFATVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVD 231

Query: 817  KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 638
            K+E++TLVED KNEG+NRGFAFLDFS RADALEACKRLQK DVVFGTDR+A+VAFADTFI
Sbjct: 232  KYEDLTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFI 291

Query: 637  EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 458
            EPDDEIM+QVRT+FLDGLPA+WDEDR  +++KKFG++EK+ELARNMPAAKRTDFGF+TFD
Sbjct: 292  EPDDEIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFD 351

Query: 457  THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRTS 278
            THD+AVACVD +NN+EL DG + VKVRARLSRPRQRGKS++HA              +  
Sbjct: 352  THDSAVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAP 411

Query: 277  WDSS----DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSS 110
            W SS    DSW + GR GR MQ+   Y GG KRP+G R+R+ + +M P+R+ SRRR PS 
Sbjct: 412  WGSSSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSP 471

Query: 109  ERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDF 5
            E S+ RRSP   + +SS++REY++ DE + R + F
Sbjct: 472  ESSFGRRSP--VYEKSSTKREYIQRDESFSRPAVF 504


>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
            gi|297734640|emb|CBI16691.3| unnamed protein product
            [Vitis vinifera]
          Length = 812

 Score =  478 bits (1230), Expect = e-132
 Identities = 238/384 (61%), Positives = 289/384 (75%), Gaps = 1/384 (0%)
 Frame = -1

Query: 1177 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 998
            HH+V KERRKRKEFE+FVGGLD+DA E+D+RKVFSQVGEVTEVRLM NP T+KNKGF F+
Sbjct: 219  HHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFL 278

Query: 997  RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 818
            RFATVEQA+RA+ ELK+P VNGKQCGV+PSQDSDTLF+GNICKTWTK   +EKL H+GV+
Sbjct: 279  RFATVEQAKRAVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVE 338

Query: 817  KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 638
              E++TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DVVFG DR+AKV+FAD+FI
Sbjct: 339  NVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFI 398

Query: 637  EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 458
            +P DEIMAQV+TVF+DGLPASWDEDR  E +KK+G++EK+ELARNMP+AKR DFGF+TFD
Sbjct: 399  DPGDEIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFD 458

Query: 457  THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRT- 281
            THDAAV C   +NN ELG+G  K KVRARLSRP QRGK    +                 
Sbjct: 459  THDAAVTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRG 518

Query: 280  SWDSSDSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSSERS 101
            SW       + GR  R +   R      KRP+G R+R P+  M P      R LP   RS
Sbjct: 519  SWARPALRSFPGRGARGL-GPRLPPAAVKRPIGFRDRRPVMAMPP----RGRPLPPPSRS 573

Query: 100  YDRRSPGLAFGRSSSRREYVRTDE 29
            YDRR+P  A+ + + +R+Y R +E
Sbjct: 574  YDRRAPVPAYPKPNLKRDYGRREE 597


>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
          Length = 775

 Score =  466 bits (1198), Expect = e-128
 Identities = 235/389 (60%), Positives = 285/389 (73%)
 Frame = -1

Query: 1177 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 998
            HH++ +ERRKRKEFE+FVGGLD+D   +D+RKVFSQVGEVTEVRLM NP T+KNKGF F+
Sbjct: 184  HHEMFQERRKRKEFEVFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFL 243

Query: 997  RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 818
            RFATVEQAR+A+ ELK+P +NGKQCGV+PSQDSDTLF+GNICKTWTK   +EKL H+GVD
Sbjct: 244  RFATVEQARQAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVD 303

Query: 817  KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 638
              E++TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DV+FG DR AKV+FAD+FI
Sbjct: 304  NVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFI 363

Query: 637  EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 458
            +P DEIMAQV+TVF+DGLPASWDEDR  E +K +G++ K+ELARNMP+AKR DFGF+TFD
Sbjct: 364  DPGDEIMAQVKTVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFD 423

Query: 457  THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRTS 278
            THDAAV C   +NN ELG+G  K KVRARLSRP QRGK    +              R S
Sbjct: 424  THDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGS 483

Query: 277  WDSSDSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSSERSY 98
            W         GRS R + S R      KRP+  R+R PI  M      +R   P   RSY
Sbjct: 484  WGLPSPRSLPGRSARGIGS-RLPPASVKRPVPVRDRRPIMSMTAR---ARPMPPPPPRSY 539

Query: 97   DRRSPGLAFGRSSSRREYVRTDEHYPRSS 11
            DRR+P  ++ +   +REY R DE  P  S
Sbjct: 540  DRRAPVPSYPKPGLKREYGRRDEVPPPRS 568


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
            gi|223534154|gb|EEF35870.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 784

 Score =  465 bits (1196), Expect = e-128
 Identities = 238/396 (60%), Positives = 293/396 (73%), Gaps = 7/396 (1%)
 Frame = -1

Query: 1177 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 998
            HH+V KERRKRKEFE+FVGGLD+DA E+D+RKVF++VGEVTEVRLM NP T+KNKGF F+
Sbjct: 200  HHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFL 259

Query: 997  RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 818
            RF+TVEQA++A+ ELK+P +NGKQCGV+PSQDSDTLF+GNICKTWTK   +EKL H+GV+
Sbjct: 260  RFSTVEQAKKAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVE 319

Query: 817  KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 638
              E+VTLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DV+FG DR AKV+FAD+FI
Sbjct: 320  NVEDVTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFI 379

Query: 637  EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 458
            +P DEIMAQV+TVF+DGLPASWDEDR  E +KKFG++EK+ELARNMP+AKR DFGF+TFD
Sbjct: 380  DPGDEIMAQVKTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFD 439

Query: 457  THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRTS 278
            +HDAAV C   +NN ELG+G  K KVRARLSRP QRGK  +HA                S
Sbjct: 440  SHDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGK-GKHA----------------S 482

Query: 277  WDSSDSWGYAGRSGRDMQ-------SHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRL 119
                 SW Y GR+ R          + R      KR +G R+R P     P R    R L
Sbjct: 483  RADFRSW-YGGRTARGPWVRPVRGIASRAAPTSVKRHVGLRDRRPPVMSMPVR---GRPL 538

Query: 118  PSSERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSS 11
            P   R+YDRR+P  ++ +SS +R+Y R +E  P  S
Sbjct: 539  PPPNRTYDRRAPAPSYPKSSLKRDYGRREELPPPRS 574