BLASTX nr result

ID: Coptis24_contig00006461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006461
         (2048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283374.1| PREDICTED: uncharacterized protein LOC100266...   150   1e-33
ref|XP_004134007.1| PREDICTED: uncharacterized protein LOC101216...   123   2e-25
ref|XP_002518121.1| conserved hypothetical protein [Ricinus comm...   120   1e-24
emb|CAN66196.1| hypothetical protein VITISV_008705 [Vitis vinifera]   100   1e-18
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    97   1e-17

>ref|XP_002283374.1| PREDICTED: uncharacterized protein LOC100266687 [Vitis vinifera]
            gi|297741935|emb|CBI33370.3| unnamed protein product
            [Vitis vinifera]
          Length = 228

 Score =  150 bits (380), Expect = 1e-33
 Identities = 105/246 (42%), Positives = 138/246 (56%), Gaps = 4/246 (1%)
 Frame = +2

Query: 1178 MKSKKLAAVREIGQLPLPSSFIFKPSIINSCKDTDQEALSKTKQQPKKSSCISLSDFLNR 1357
            MKSK   ++RE  Q  L S+F+ + S  +S KD+DQ    K+   P K S +SLSDFL+R
Sbjct: 1    MKSKN-PSIREWDQRSLSSTFLQRSS--SSSKDSDQGMPVKS---PTKDSHVSLSDFLDR 54

Query: 1358 KLEKKDFTQPNTVQ---KPFSLVGEGRDVVGVFDDECIGVKRGV-KNDSCIDETVFRQFI 1525
            +L       P TVQ   KPFS      +  G         KRG  K +  ID  VF+Q +
Sbjct: 55   RLHTTSVL-PKTVQGKQKPFSSPLGCSNECGSIHGHIGVKKRGEDKANYAIDIQVFKQ-L 112

Query: 1526 KHSRIEKEQCDGPSSGNEVGESETTPEEKDSRQWNPFRVSSTGGEQRPAASKHLLILGXX 1705
            KHSR EKE   G    +++G   T    +  ++ +P    S GG  R    KHL++LG  
Sbjct: 113  KHSRKEKEDFMGSFGVDDIGSFHTNTVPESRKRKDP----SVGGISR----KHLVVLGGD 164

Query: 1706 XXXXXXXXXXATFVLDEKQKPLYNHYANGSGWWDCGMEGVDSEEVGCSDAWEGMGATTNL 1885
                        F+ ++K +PL+NHYANGSGWWDC MEGVD +EVGC+ AWEG+G+TT L
Sbjct: 165  PKPKQTGRLE-NFIRNKKPRPLFNHYANGSGWWDCNMEGVDGDEVGCNQAWEGVGSTT-L 222

Query: 1886 GGLEWH 1903
            GGLEWH
Sbjct: 223  GGLEWH 228


>ref|XP_004134007.1| PREDICTED: uncharacterized protein LOC101216371 [Cucumis sativus]
            gi|449518585|ref|XP_004166317.1| PREDICTED:
            uncharacterized LOC101216371 [Cucumis sativus]
          Length = 235

 Score =  123 bits (308), Expect = 2e-25
 Identities = 84/248 (33%), Positives = 131/248 (52%), Gaps = 8/248 (3%)
 Frame = +2

Query: 1184 SKKLAAVREIGQLPLPSSFIFKPSIINSCKDTDQEALSKTKQQPKKSSCISLSDFLNRKL 1363
            S +   +R  GQ  + SSF+ + S  N  K ++ ++ SK     KK++ +SLSDFL RKL
Sbjct: 2    SNERPPIRVFGQRSISSSFLSRSS--NPFKSSNDDSQSKLS---KKNAQLSLSDFLARKL 56

Query: 1364 EKKDFTQPNTVQK--PFSLVGEGRDVVGVFDDECIGVKRGV--KNDSCIDETVFRQFIKH 1531
             +    Q     K  PFS +   R+     ++  I +  G   + +S I + +F QF   
Sbjct: 57   PETSVPQRTVKGKSTPFSSLQGPRNS----NNAPIAIDCGTDSQTESAISKVLFEQF--- 109

Query: 1532 SRIEKEQCD----GPSSGNEVGESETTPEEKDSRQWNPFRVSSTGGEQRPAASKHLLILG 1699
             R E  QC+    G +S  ++  ++   + +  ++ N   +S+T  E +     +++++G
Sbjct: 110  KRSEPNQCECLVPGSASERDIFNTDGILDSRKRKKSNEGIISTTPCESQ-TRKMNVVVIG 168

Query: 1700 XXXXXXXXXXXXATFVLDEKQKPLYNHYANGSGWWDCGMEGVDSEEVGCSDAWEGMGATT 1879
                             ++K KPLYNHYA+GSGWWD  MEGVDSEEVG  + WEG+G+TT
Sbjct: 169  GDPKPDQKGTEPIPIARNKKPKPLYNHYASGSGWWDSNMEGVDSEEVGLGEVWEGVGSTT 228

Query: 1880 NLGGLEWH 1903
             LGG+EWH
Sbjct: 229  -LGGIEWH 235


>ref|XP_002518121.1| conserved hypothetical protein [Ricinus communis]
            gi|223542717|gb|EEF44254.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 256

 Score =  120 bits (302), Expect = 1e-24
 Identities = 92/269 (34%), Positives = 129/269 (47%), Gaps = 27/269 (10%)
 Frame = +2

Query: 1178 MKSKKLAAVREIGQLPLPSSFIFKPSIINSCKDTDQEALSKTKQQPKKSSCISLSDFLNR 1357
            MKSK    +R +GQ  +P SF F  S  N  KD+  + L   K+   K+S IS SDFL++
Sbjct: 1    MKSKH-NEIRVLGQRSIPLSF-FSGSSSNLGKDSKDDVL---KEGTWKNSSISFSDFLDQ 55

Query: 1358 KLEKKDFTQPNTVQ---KPFSLVGEGRDVVGVFDDECIGVKR--GVKNDSCIDETVFRQF 1522
            KL   D     TV+   +PF      RD  G  +   IG ++   V+ +S ID+ VF QF
Sbjct: 56   KLHT-DHVVNKTVKGKSRPFKSPLGSRDDCGSIN-HLIGTRKVEEVEKNSAIDQLVFEQF 113

Query: 1523 IKHSRIEKEQCDGPSSGNE----------------------VGESETTPEEKDSRQWNPF 1636
               S  + +   G   G +                      +G S +  E    ++ NPF
Sbjct: 114  KPTSAEKGDNNIGSGDGGDGGDVEHATSGTAVGVDLSLVDKIGSSNSNNEHVTRKRRNPF 173

Query: 1637 RVSSTGGEQRPAASKHLLILGXXXXXXXXXXXXATFVLDEKQKPLYNHYANGSGWWDCGM 1816
                  G+ +    KHLL+LG              F+ ++K +  +NHY NG GWWDC M
Sbjct: 174  E----DGDSKHTTRKHLLVLGDDPESRQKAGRKR-FLGNKKTRSSFNHYGNGCGWWDCDM 228

Query: 1817 EGVDSEEVGCSDAWEGMGATTNLGGLEWH 1903
            EGVD+EEVG  D WEG+G+TT  G ++WH
Sbjct: 229  EGVDTEEVGLGDVWEGVGSTT-FGVIDWH 256


>emb|CAN66196.1| hypothetical protein VITISV_008705 [Vitis vinifera]
          Length = 151

 Score =  100 bits (249), Expect = 1e-18
 Identities = 44/75 (58%), Positives = 55/75 (73%)
 Frame = +2

Query: 1679 KHLLILGXXXXXXXXXXXXATFVLDEKQKPLYNHYANGSGWWDCGMEGVDSEEVGCSDAW 1858
            KHL++LG              F+ ++K +PL+NHYANGSGWWDC MEGVD +EVGC+ AW
Sbjct: 79   KHLVVLGGDPKPKQTGRLE-NFIRNKKPRPLFNHYANGSGWWDCNMEGVDGDEVGCNQAW 137

Query: 1859 EGMGATTNLGGLEWH 1903
            EG+G+TT LGGLEWH
Sbjct: 138  EGVGSTT-LGGLEWH 151


>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 49/151 (32%), Positives = 79/151 (52%)
 Frame = +3

Query: 60  VNWSKLVWFPNRIPRHSFICRMALLDGLKTRQKLMQWHVVTDDMCILCGQHAETEEHLFF 239
           V WS L+W    IP+HSF   +A+ D L TR +L +W       C+LCG + E+ +HLFF
Sbjct: 124 VGWSGLLWGGGNIPKHSFCAWLAIRDRLGTRGRLSRWDRSIPLSCLLCGGNYESRDHLFF 183

Query: 240 SCSYSQTVWAILLAWGGYNKSRAATWLEELKWVTEHGCGKGVKKGALRLSFNGFMYWVWK 419
           SC +   +W+ +L     +  R   W  EL W+   G GK V++   RL +   +Y++W+
Sbjct: 184 SCHFGWEIWSRILLLKS-SSHRTGYWGVELSWIYNQGIGKSVRRKLWRLLWCATIYFIWQ 242

Query: 420 EGSERIFSNKNCTAAQLARLIFQDVKIKLHS 512
           E + R+          + +LI   +K++  S
Sbjct: 243 ERNHRLHGGSIREPLVVFQLIRSCIKVRAAS 273


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