BLASTX nr result

ID: Coptis24_contig00006448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006448
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26372.3| unnamed protein product [Vitis vinifera]              529   e-148
ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263...   528   e-147
ref|XP_002517011.1| phosphatidylcholine transfer protein, putati...   510   e-142
ref|XP_002312574.1| predicted protein [Populus trichocarpa] gi|2...   502   e-140
ref|XP_002314649.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137

>emb|CBI26372.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  529 bits (1363), Expect = e-148
 Identities = 254/354 (71%), Positives = 292/354 (82%), Gaps = 5/354 (1%)
 Frame = +2

Query: 68   YDCLSAFSVGRRLWANFNGKD-----SADQSDRSGVRRSESNESIGGVNLNIEAPNEQSD 232
            +  LSAFSVGR +W+NF  +      +A  S  +G  RS      G V+L+      + D
Sbjct: 45   FTALSAFSVGRTIWSNFKVRRKGPTAAAASSSPAGTARSVEGNG-GDVSLDTRPAEIEQD 103

Query: 233  IVTEKDLDHLLYLLEGNLGDGAWQGMMERSTPSMAYQAWRHEPESGPTVYRSRTVYEDVT 412
            IVTE DLDHLL++LE   G+ AWQGMMERSTP+M+YQAWRHEPE+GPTVYRSRTV+ED T
Sbjct: 104  IVTENDLDHLLHVLERKDGEMAWQGMMERSTPNMSYQAWRHEPENGPTVYRSRTVFEDAT 163

Query: 413  PELVRDFFWDDEFRPKWDPMLAYFNILEESPHTGTMIVHWIKKFPFFCSDREYIIGRRIW 592
            PE+VRDFFWDDEFRPKWDPMLAYF ILEE PHT TMIVHWIKKFPFFCSDREYIIGRRIW
Sbjct: 164  PEVVRDFFWDDEFRPKWDPMLAYFKILEEFPHTATMIVHWIKKFPFFCSDREYIIGRRIW 223

Query: 593  ESGKTYYCVTKGVPYPGLPKRDKPRRVELYFSSWIIKAVESCKGDGQLSACEVTLVHYED 772
            E+GKTYYCVTKGVPYPGLPKRDKPRRVELYFSSWII+AVES KG+G +SACEV+LVHYED
Sbjct: 224  EAGKTYYCVTKGVPYPGLPKRDKPRRVELYFSSWIIRAVESSKGEG-MSACEVSLVHYED 282

Query: 773  MGIPKDVAKLGVRHGMWGTVKKIHSGMKAYQLARKCEATLSRSAQMAQITTKIPIQGSTD 952
            MGIPKDVAKLGVRHGMWGTVKK+HSGM+AYQ ARK EA LSRSA MA+ITTKI    ++D
Sbjct: 283  MGIPKDVAKLGVRHGMWGTVKKLHSGMRAYQNARKTEAPLSRSALMARITTKISFDETSD 342

Query: 953  SLQAQTEAEDRCWIVDLPRRVDNGVDWRWVVVGGTVALVCGLHTGVIGKTLLFG 1114
            SL+  +  E++  +VD+ R+ D G+DW+W+V+GGTVALVCGLHTG IGK LL G
Sbjct: 343  SLEPASGEEEKGQVVDIQRKKDKGIDWKWIVIGGTVALVCGLHTGTIGKALLIG 396


>ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263172 isoform 2 [Vitis
            vinifera]
          Length = 429

 Score =  528 bits (1360), Expect = e-147
 Identities = 252/350 (72%), Positives = 291/350 (83%), Gaps = 1/350 (0%)
 Frame = +2

Query: 68   YDCLSAFSVGRRLWANFNGKDSADQSDRSGVRRSESNESIGGVNLNIEAPNE-QSDIVTE 244
            +  LSAFSVGR +W+NF  +       R G   + ++ S  G   ++E   E + DIVTE
Sbjct: 80   FTALSAFSVGRTIWSNFKVR-------RKGPTAAAASSSPAGTARSVEGNGEIEQDIVTE 132

Query: 245  KDLDHLLYLLEGNLGDGAWQGMMERSTPSMAYQAWRHEPESGPTVYRSRTVYEDVTPELV 424
             DLDHLL++LE   G+ AWQGMMERSTP+M+YQAWRHEPE+GPTVYRSRTV+ED TPE+V
Sbjct: 133  NDLDHLLHVLERKDGEMAWQGMMERSTPNMSYQAWRHEPENGPTVYRSRTVFEDATPEVV 192

Query: 425  RDFFWDDEFRPKWDPMLAYFNILEESPHTGTMIVHWIKKFPFFCSDREYIIGRRIWESGK 604
            RDFFWDDEFRPKWDPMLAYF ILEE PHT TMIVHWIKKFPFFCSDREYIIGRRIWE+GK
Sbjct: 193  RDFFWDDEFRPKWDPMLAYFKILEEFPHTATMIVHWIKKFPFFCSDREYIIGRRIWEAGK 252

Query: 605  TYYCVTKGVPYPGLPKRDKPRRVELYFSSWIIKAVESCKGDGQLSACEVTLVHYEDMGIP 784
            TYYCVTKGVPYPGLPKRDKPRRVELYFSSWII+AVES KG+G +SACEV+LVHYEDMGIP
Sbjct: 253  TYYCVTKGVPYPGLPKRDKPRRVELYFSSWIIRAVESSKGEG-MSACEVSLVHYEDMGIP 311

Query: 785  KDVAKLGVRHGMWGTVKKIHSGMKAYQLARKCEATLSRSAQMAQITTKIPIQGSTDSLQA 964
            KDVAKLGVRHGMWGTVKK+HSGM+AYQ ARK EA LSRSA MA+ITTKI    ++DSL+ 
Sbjct: 312  KDVAKLGVRHGMWGTVKKLHSGMRAYQNARKTEAPLSRSALMARITTKISFDETSDSLEP 371

Query: 965  QTEAEDRCWIVDLPRRVDNGVDWRWVVVGGTVALVCGLHTGVIGKTLLFG 1114
             +  E++  +VD+ R+ D G+DW+W+V+GGTVALVCGLHTG IGK LL G
Sbjct: 372  ASGEEEKGQVVDIQRKKDKGIDWKWIVIGGTVALVCGLHTGTIGKALLIG 421


>ref|XP_002517011.1| phosphatidylcholine transfer protein, putative [Ricinus communis]
            gi|223543646|gb|EEF45174.1| phosphatidylcholine transfer
            protein, putative [Ricinus communis]
          Length = 442

 Score =  510 bits (1314), Expect = e-142
 Identities = 247/355 (69%), Positives = 281/355 (79%), Gaps = 6/355 (1%)
 Frame = +2

Query: 68   YDCLSAFSVGRRLWANFNGKD------SADQSDRSGVRRSESNESIGGVNLNIEAPNEQS 229
            +  LSAFSV R +W+NF GK+       A  +  +  R S      G    +   P E  
Sbjct: 80   FTALSAFSVCRTVWSNFKGKNVKLAPTMATPASMAPTRNSADGGGGGESVSSCGEPQEGE 139

Query: 230  DIVTEKDLDHLLYLLEGNLGDGAWQGMMERSTPSMAYQAWRHEPESGPTVYRSRTVYEDV 409
            D+VTE DL+HLL+LLEG  G   WQ MMERST +MAYQAWRHEP++ PTVYRSRTV+ED 
Sbjct: 140  DVVTENDLEHLLHLLEGKDGQMEWQFMMERSTSNMAYQAWRHEPQNAPTVYRSRTVFEDA 199

Query: 410  TPELVRDFFWDDEFRPKWDPMLAYFNILEESPHTGTMIVHWIKKFPFFCSDREYIIGRRI 589
            TPELVRDFFWDDEFR KWDPMLAYF ILEE PH+GTMIVHWIKKFPFFCSDREYIIGRRI
Sbjct: 200  TPELVRDFFWDDEFRLKWDPMLAYFKILEEFPHSGTMIVHWIKKFPFFCSDREYIIGRRI 259

Query: 590  WESGKTYYCVTKGVPYPGLPKRDKPRRVELYFSSWIIKAVESCKGDGQLSACEVTLVHYE 769
            WE+GKTYYC+TKGVPY GLPKRDKPRRV+LYFSSW+I+AVES KGDGQ+SACEVTL H E
Sbjct: 260  WEAGKTYYCLTKGVPYEGLPKRDKPRRVDLYFSSWVIRAVESRKGDGQMSACEVTLFHCE 319

Query: 770  DMGIPKDVAKLGVRHGMWGTVKKIHSGMKAYQLARKCEATLSRSAQMAQITTKIPIQGST 949
            DMGIPKDVAKLGVRHGMWGTVKK+HSGM+AYQ ARK  A+LSRSA MA+ITTKI    S 
Sbjct: 320  DMGIPKDVAKLGVRHGMWGTVKKLHSGMRAYQNARKSGASLSRSALMARITTKISFDESM 379

Query: 950  DSLQAQTEAEDRCWIVDLPRRVDNGVDWRWVVVGGTVALVCGLHTGVIGKTLLFG 1114
            DS +  T  ED+   VD+ R  D+G+DW+W+VVGGTVALVCGLH+G +GK LLFG
Sbjct: 380  DSSEPVTGEEDKHGAVDIRRHKDHGIDWKWIVVGGTVALVCGLHSGAVGKALLFG 434


>ref|XP_002312574.1| predicted protein [Populus trichocarpa] gi|222852394|gb|EEE89941.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  502 bits (1293), Expect = e-140
 Identities = 242/354 (68%), Positives = 280/354 (79%), Gaps = 5/354 (1%)
 Frame = +2

Query: 68   YDCLSAFSVGRRLWANFNGKD-----SADQSDRSGVRRSESNESIGGVNLNIEAPNEQSD 232
            +  +SAFSV R +W+NF GK+     +A  S  +  +R+    S G ++ + E   ++ D
Sbjct: 80   FTAISAFSVCRTIWSNFQGKNRKSAPAAAASSSATSQRNPGGRSGGSISSSGEL-EDRED 138

Query: 233  IVTEKDLDHLLYLLEGNLGDGAWQGMMERSTPSMAYQAWRHEPESGPTVYRSRTVYEDVT 412
            IVTE DL+HLL+LLEG      WQ MMERST +M YQAWRHEP+ GPTVYRSR+V+ED T
Sbjct: 139  IVTENDLEHLLHLLEGKDRQMEWQCMMERSTSNMRYQAWRHEPQEGPTVYRSRSVFEDAT 198

Query: 413  PELVRDFFWDDEFRPKWDPMLAYFNILEESPHTGTMIVHWIKKFPFFCSDREYIIGRRIW 592
            PELVRDFFWDDEFRPKWD MLAYF ILEE PHTGTMIVHWIKKFPFFCSDREYIIGRRIW
Sbjct: 199  PELVRDFFWDDEFRPKWDTMLAYFKILEEYPHTGTMIVHWIKKFPFFCSDREYIIGRRIW 258

Query: 593  ESGKTYYCVTKGVPYPGLPKRDKPRRVELYFSSWIIKAVESCKGDGQLSACEVTLVHYED 772
            ++GKTYYCVTKGVPYPGL KRDK RRV+LYFS W+I+AVES KGD Q+SACEVTL+HYED
Sbjct: 259  DAGKTYYCVTKGVPYPGLHKRDKLRRVDLYFSGWVIRAVESRKGDEQMSACEVTLLHYED 318

Query: 773  MGIPKDVAKLGVRHGMWGTVKKIHSGMKAYQLARKCEATLSRSAQMAQITTKIPIQGSTD 952
            MGIPKDVAKLGVRH MWG VKK+HSGM+AYQ ARK EA+LSRSA MA+ITTK+      D
Sbjct: 319  MGIPKDVAKLGVRHAMWGAVKKLHSGMRAYQNARKSEASLSRSALMARITTKVSFDEGMD 378

Query: 953  SLQAQTEAEDRCWIVDLPRRVDNGVDWRWVVVGGTVALVCGLHTGVIGKTLLFG 1114
            S +   E EDR   VD+ R  D+G+DW+W+ VGGTVALVCGLHTG IGK LL G
Sbjct: 379  SSETANEEEDRSPAVDIQRHKDHGIDWKWIAVGGTVALVCGLHTGAIGKALLLG 432


>ref|XP_002314649.1| predicted protein [Populus trichocarpa] gi|222863689|gb|EEF00820.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  493 bits (1269), Expect = e-137
 Identities = 240/354 (67%), Positives = 273/354 (77%), Gaps = 5/354 (1%)
 Frame = +2

Query: 68   YDCLSAFSVGRRLWANFNGKDS----ADQSDRSGVRRSESNESIGGVNLNIEAPNEQSDI 235
            +  LSA SV R +W+NF GKD     A  +  SG    E  +            + + DI
Sbjct: 79   FTALSALSVCRTIWSNFKGKDGKSVPAAAASSSGANSGERRDG-----------SVREDI 127

Query: 236  VTEKDLDHLLYLLEGNLGDGAWQGMMERSTPSMAYQAWRHEPESGPTVYRSRTVYEDVTP 415
            VTEKDL+HLL+LLEG  G   WQ MMERST +M YQAWRHEP+ GPTVYRSRTV+ED TP
Sbjct: 128  VTEKDLEHLLHLLEGKDGRKEWQCMMERSTSNMRYQAWRHEPQEGPTVYRSRTVFEDATP 187

Query: 416  ELVRDFFWDDEFRPKWDPMLAYFNILEESPHTGTMIVHWIKKFPFFCSDREYIIGRRIWE 595
            ELVRDFFWDDEFRPKWDPMLAYF ILEE PHTG MIVHWIKKFPFFCSDREYIIGRRIW+
Sbjct: 188  ELVRDFFWDDEFRPKWDPMLAYFKILEECPHTGRMIVHWIKKFPFFCSDREYIIGRRIWD 247

Query: 596  SGKTYYCVTKGVPYPGLPKRDKPRRVELYFSSWIIKAVESCKGDGQLSACEVTLVHYEDM 775
            + K  YCVTKGVPYPGL KRDKPRRV+LYFSSW+I+AVES +GDGQ+SACEVTL+HYEDM
Sbjct: 248  ARKASYCVTKGVPYPGLHKRDKPRRVDLYFSSWVIRAVESRRGDGQMSACEVTLLHYEDM 307

Query: 776  GIPKDVAKLGVRHGMWGTVKKIHSGMKAYQLARKCEATLSRSAQMAQITTKIPIQGSTDS 955
            GIPKDVAKLGVRHGMWG VKK+HSGM+AYQ ARK EA+LSRSA MA+ITTKI      DS
Sbjct: 308  GIPKDVAKLGVRHGMWGAVKKLHSGMRAYQNARKSEASLSRSALMARITTKISFDEGMDS 367

Query: 956  LQAQTEA-EDRCWIVDLPRRVDNGVDWRWVVVGGTVALVCGLHTGVIGKTLLFG 1114
             +  T   ED+   VD+ R  D+G+DW+W+ +GGTV LVC LH+G IGK LL G
Sbjct: 368  SEPVTGGEEDKSQAVDIQRHNDHGIDWKWIAIGGTVTLVCCLHSGAIGKALLLG 421


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