BLASTX nr result

ID: Coptis24_contig00006446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006446
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305056.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
emb|CAN69941.1| hypothetical protein VITISV_006129 [Vitis vinifera]   106   3e-21
ref|XP_003629826.1| UOS1 [Medicago truncatula] gi|355523848|gb|A...   105   4e-21
ref|XP_002265546.1| PREDICTED: uncharacterized protein LOC100241...   105   4e-21
ref|NP_001190764.1| Rossmann-fold NAD(P)-binding domain-containi...   104   1e-20

>ref|XP_002305056.1| predicted protein [Populus trichocarpa] gi|222848020|gb|EEE85567.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/100 (53%), Positives = 67/100 (67%)
 Frame = +2

Query: 239 RGSIVAESGKQGWDIGRFLKTLYYFNGPPSPAKFFASLIDKLSNSTTSEPVKKIGTSDVI 418
           RG I+AE+GKQGWD+GRFLKTLY+FNGPPSP+KFF  LI+KLS+ + SEP K + +S ++
Sbjct: 68  RGPILAEAGKQGWDLGRFLKTLYFFNGPPSPSKFFEFLIEKLSSPSPSEPKKSMESSGIV 127

Query: 419 XXXXXXXXXXXXXXXXXXXXXXPFRVLVRNEEKAKRMLGP 538
                                 P RVL RNEEKA++MLGP
Sbjct: 128 LVVGATGGVGRRVVDVLQKKGLPVRVLARNEEKARKMLGP 167


>emb|CAN69941.1| hypothetical protein VITISV_006129 [Vitis vinifera]
          Length = 243

 Score =  106 bits (264), Expect = 3e-21
 Identities = 54/100 (54%), Positives = 63/100 (63%)
 Frame = +2

Query: 239 RGSIVAESGKQGWDIGRFLKTLYYFNGPPSPAKFFASLIDKLSNSTTSEPVKKIGTSDVI 418
           +G I AE+ KQ WD GRFL TLY+FNGPPSPAKFF  LI+KLS  T SEPVK + TS ++
Sbjct: 81  KGPIYAEAKKQAWDXGRFLXTLYFFNGPPSPAKFFEFLIEKLSGPTPSEPVKAMETSGIV 140

Query: 419 XXXXXXXXXXXXXXXXXXXXXXPFRVLVRNEEKAKRMLGP 538
                                 P RVLVRNEEKA++MLGP
Sbjct: 141 LVAGATGGVGRRVVDILRKKGLPVRVLVRNEEKARKMLGP 180


>ref|XP_003629826.1| UOS1 [Medicago truncatula] gi|355523848|gb|AET04302.1| UOS1
           [Medicago truncatula]
          Length = 589

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/99 (52%), Positives = 65/99 (65%)
 Frame = +2

Query: 239 RGSIVAESGKQGWDIGRFLKTLYYFNGPPSPAKFFASLIDKLSNSTTSEPVKKIGTSDVI 418
           R  I A++G+Q WD GRF+KTLY+FNGPPSPAKFF  L+ KLS+S+TSE V  +GTSD++
Sbjct: 59  RTIISAKAGRQSWDFGRFIKTLYFFNGPPSPAKFFDFLVGKLSSSSTSESVNSMGTSDIV 118

Query: 419 XXXXXXXXXXXXXXXXXXXXXXPFRVLVRNEEKAKRMLG 535
                                 P RVLVRNEEKA++MLG
Sbjct: 119 LVAGATGGVGRRVVDELRKKGIPVRVLVRNEEKARKMLG 157


>ref|XP_002265546.1| PREDICTED: uncharacterized protein LOC100241189 [Vitis vinifera]
           gi|297740537|emb|CBI30719.3| unnamed protein product
           [Vitis vinifera]
          Length = 605

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/100 (53%), Positives = 63/100 (63%)
 Frame = +2

Query: 239 RGSIVAESGKQGWDIGRFLKTLYYFNGPPSPAKFFASLIDKLSNSTTSEPVKKIGTSDVI 418
           +G I AE+ KQ WD+GRFL TLY+FNGPPSPAKFF  LI+KLS  T SEP K + TS ++
Sbjct: 75  KGPIYAEAKKQAWDLGRFLSTLYFFNGPPSPAKFFEFLIEKLSGPTPSEPEKAMETSGIV 134

Query: 419 XXXXXXXXXXXXXXXXXXXXXXPFRVLVRNEEKAKRMLGP 538
                                 P RVLVRNEEKA++MLGP
Sbjct: 135 LVAGATGGVGRRVVDILRKKGLPVRVLVRNEEKARKMLGP 174


>ref|NP_001190764.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|332658693|gb|AEE84093.1| Rossmann-fold
           NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 627

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/100 (49%), Positives = 63/100 (63%)
 Frame = +2

Query: 239 RGSIVAESGKQGWDIGRFLKTLYYFNGPPSPAKFFASLIDKLSNSTTSEPVKKIGTSDVI 418
           R  + A+SG QGWD GRF+KTLY+FNGPPSP KF +S+ +KL+N  T EPV ++GTS +I
Sbjct: 66  RKRVTAKSGSQGWDFGRFVKTLYFFNGPPSPLKFVSSVFEKLTNGATEEPVAEMGTSGII 125

Query: 419 XXXXXXXXXXXXXXXXXXXXXXPFRVLVRNEEKAKRMLGP 538
                                 P + LVRNEEKA++MLGP
Sbjct: 126 LVAGATGGVGRRIVDILRKRGLPVKALVRNEEKARKMLGP 165


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