BLASTX nr result

ID: Coptis24_contig00006443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006443
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165674.1| PREDICTED: uncharacterized protein LOC101230...    63   3e-08
ref|XP_004144689.1| PREDICTED: uncharacterized protein LOC101209...    63   3e-08
emb|CBI21559.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002331398.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|AEQ94158.1| Src homology 3 domain containing protein [Elaeis ...    55   5e-06

>ref|XP_004165674.1| PREDICTED: uncharacterized protein LOC101230432, partial [Cucumis
           sativus]
          Length = 892

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/67 (53%), Positives = 42/67 (62%)
 Frame = +1

Query: 73  QNASLQKDDARXXXXXXXXXXXXXXXXISSHFGGKSYPSLHSSKPSNYGAPQSSERSGAA 252
           + + L++DDAR                ISSHFGG SYPSL SS+PS YG  Q+SERSG  
Sbjct: 715 ETSELEEDDARSSGTSSPESTGSVETSISSHFGGMSYPSLFSSRPS-YGGTQTSERSG-- 771

Query: 253 ASRFSNP 273
           ASRFSNP
Sbjct: 772 ASRFSNP 778


>ref|XP_004144689.1| PREDICTED: uncharacterized protein LOC101209457 [Cucumis sativus]
          Length = 1262

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/67 (53%), Positives = 42/67 (62%)
 Frame = +1

Query: 73   QNASLQKDDARXXXXXXXXXXXXXXXXISSHFGGKSYPSLHSSKPSNYGAPQSSERSGAA 252
            + + L++DDAR                ISSHFGG SYPSL SS+PS YG  Q+SERSG  
Sbjct: 1085 ETSELEEDDARSSGTSSPESTGSVETSISSHFGGMSYPSLFSSRPS-YGGTQTSERSG-- 1141

Query: 253  ASRFSNP 273
            ASRFSNP
Sbjct: 1142 ASRFSNP 1148


>emb|CBI21559.3| unnamed protein product [Vitis vinifera]
          Length = 1214

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/66 (50%), Positives = 40/66 (60%)
 Frame = +1

Query: 73   QNASLQKDDARXXXXXXXXXXXXXXXXISSHFGGKSYPSLHSSKPSNYGAPQSSERSGAA 252
            + + +++DDAR                ISSHFGG +YPSL SS+PS YG  QSSER   A
Sbjct: 1031 ETSEMEEDDARSSGTSSPESTGSVETSISSHFGGMNYPSLFSSRPSGYGTSQSSER--PA 1088

Query: 253  ASRFSN 270
            ASRFSN
Sbjct: 1089 ASRFSN 1094


>ref|XP_002331398.1| predicted protein [Populus trichocarpa] gi|222873612|gb|EEF10743.1|
           predicted protein [Populus trichocarpa]
          Length = 565

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/85 (38%), Positives = 46/85 (54%)
 Frame = +1

Query: 19  NDLKRESIKIDSGNSRPGQNASLQKDDARXXXXXXXXXXXXXXXXISSHFGGKSYPSLHS 198
           N + R S+  D   ++    +S  ++D R                ISSHFGG +YPSL S
Sbjct: 373 NIISRPSVSYDDMWAKTLLESSELEEDVRSSGSSSPDSIGSVETSISSHFGGMNYPSLFS 432

Query: 199 SKPSNYGAPQSSERSGAAASRFSNP 273
           S+P++YGA Q SERSG   +R+S P
Sbjct: 433 SRPTSYGASQISERSG--GNRYSGP 455


>gb|AEQ94158.1| Src homology 3 domain containing protein [Elaeis guineensis]
          Length = 354

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/62 (50%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 88  QKDDARXXXXXXXXXXXXXXXXISSHFGGKSYPSLHSSKPSNYGAPQSSE-RSGAAASRF 264
           ++DDAR                ISSHFGG SYPSL SS+PS YG  Q  E RS AA+SR 
Sbjct: 174 EEDDARSSGTSSPESTGSVESSISSHFGGMSYPSLFSSRPSGYGVSQQLEQRSAAASSRL 233

Query: 265 SN 270
            N
Sbjct: 234 GN 235


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