BLASTX nr result

ID: Coptis24_contig00006436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006436
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298376.1| predicted protein [Populus trichocarpa] gi|2...   265   3e-69
ref|XP_002284406.1| PREDICTED: 3-hydroxyacyl-CoA dehydratase 2 [...   258   5e-67
ref|NP_001238624.1| uncharacterized protein LOC100527607 [Glycin...   243   1e-62
gb|AFK41133.1| unknown [Medicago truncatula]                          243   2e-62
ref|XP_003606497.1| Protein-tyrosine phosphatase-like member B [...   243   2e-62

>ref|XP_002298376.1| predicted protein [Populus trichocarpa] gi|222845634|gb|EEE83181.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  265 bits (677), Expect = 3e-69
 Identities = 122/167 (73%), Positives = 143/167 (85%)
 Frame = -3

Query: 502 SNFYLFAYNSFQAIGWAISLFNVLSSLVNTKSFNGAYTSAGYLICLLQTLSVLEVLHGAV 323
           S  YLFAYNS QA GWA+SLF +L +  +T S NGAY SAG LICLLQT+S LEV+HGA+
Sbjct: 5   SKLYLFAYNSLQAFGWAVSLFAILINFFSTHSLNGAYASAGDLICLLQTVSFLEVIHGAL 64

Query: 322 GLVPSGVLFPLMQWGGRTHWLLAIVSQISEVQELPAVFVTFFAWSLSEVIRYSHYALNCA 143
           G+VPSGVLFP MQWGGRTH++LAIV QI EVQELP+VF+TF AWS++EVIRYSHYALNC 
Sbjct: 65  GVVPSGVLFPFMQWGGRTHFVLAIVRQIIEVQELPSVFITFVAWSMAEVIRYSHYALNCV 124

Query: 142 GVCPRWVTYLRYTAFIVLYPIGVAMGEMWVMYKALPLIKEKSPYSDF 2
           G CP W+TYLRYTAFIVLYPIG+A GEMW MY+ALP +K+K+ Y+DF
Sbjct: 125 GSCPSWITYLRYTAFIVLYPIGLAPGEMWTMYQALPFVKKKNLYADF 171


>ref|XP_002284406.1| PREDICTED: 3-hydroxyacyl-CoA dehydratase 2 [Vitis vinifera]
           gi|297746135|emb|CBI16191.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  258 bits (658), Expect = 5e-67
 Identities = 119/162 (73%), Positives = 142/162 (87%)
 Frame = -3

Query: 502 SNFYLFAYNSFQAIGWAISLFNVLSSLVNTKSFNGAYTSAGYLICLLQTLSVLEVLHGAV 323
           +N YL AYNS QA+GWA+SL  +LSS ++T+SFNGAY SAG L+CLLQT+S LEV+HGA+
Sbjct: 5   ANLYLLAYNSLQALGWAVSLSRILSSFLDTRSFNGAYASAGDLVCLLQTVSFLEVVHGAI 64

Query: 322 GLVPSGVLFPLMQWGGRTHWLLAIVSQISEVQELPAVFVTFFAWSLSEVIRYSHYALNCA 143
           GLVPSGVL PLMQWGGRTH+LLAIV +I EVQELP+VF+TF AWS+SEVIRYSHYAL+C 
Sbjct: 65  GLVPSGVLLPLMQWGGRTHFLLAIVRRIVEVQELPSVFITFIAWSISEVIRYSHYALHCM 124

Query: 142 GVCPRWVTYLRYTAFIVLYPIGVAMGEMWVMYKALPLIKEKS 17
           G CP  +TYLRYTAFI+LYP+GVA GEMW+MY+ALP IK K+
Sbjct: 125 GSCPSCITYLRYTAFILLYPVGVAPGEMWLMYQALPFIKRKN 166


>ref|NP_001238624.1| uncharacterized protein LOC100527607 [Glycine max]
           gi|255632745|gb|ACU16724.1| unknown [Glycine max]
          Length = 218

 Score =  243 bits (621), Expect = 1e-62
 Identities = 113/170 (66%), Positives = 135/170 (79%)
 Frame = -3

Query: 514 MSGPSNFYLFAYNSFQAIGWAISLFNVLSSLVNTKSFNGAYTSAGYLICLLQTLSVLEVL 335
           MS  S  YL AYNSFQAIGW ISL  +L +L+ T S  G Y SA  LIC LQ  + LEV+
Sbjct: 1   MSRISTLYLLAYNSFQAIGWTISLTKILYNLLVTASIKGTYASAASLICFLQCAAFLEVI 60

Query: 334 HGAVGLVPSGVLFPLMQWGGRTHWLLAIVSQISEVQELPAVFVTFFAWSLSEVIRYSHYA 155
           HGA+G+VPSGVL PLMQWGGRTH++LAIV ++ E+QELP+VF+TF AWS+ EVIRYSHYA
Sbjct: 61  HGAIGIVPSGVLLPLMQWGGRTHFVLAIVRKLDELQELPSVFITFLAWSMGEVIRYSHYA 120

Query: 154 LNCAGVCPRWVTYLRYTAFIVLYPIGVAMGEMWVMYKALPLIKEKSPYSD 5
             C G CP W+TYLRYTAFIVLYP+GV  GE+W MY+ALP+IKEK+ Y+D
Sbjct: 121 FGCLGNCPSWMTYLRYTAFIVLYPLGVGPGEIWAMYQALPVIKEKNLYAD 170


>gb|AFK41133.1| unknown [Medicago truncatula]
          Length = 219

 Score =  243 bits (619), Expect = 2e-62
 Identities = 109/166 (65%), Positives = 135/166 (81%)
 Frame = -3

Query: 502 SNFYLFAYNSFQAIGWAISLFNVLSSLVNTKSFNGAYTSAGYLICLLQTLSVLEVLHGAV 323
           S  YL AYNSFQAIGW +SL N+L +L++T S  G Y SAG LI  LQ  + LEV+HGA+
Sbjct: 6   STLYLLAYNSFQAIGWFVSLINILYNLLSTSSITGTYASAGTLISFLQCAAFLEVIHGAI 65

Query: 322 GLVPSGVLFPLMQWGGRTHWLLAIVSQISEVQELPAVFVTFFAWSLSEVIRYSHYALNCA 143
           GLVPSG L PLMQWGGRTH++LAIV+ I EVQELP VF+TF AWS+ E+IRYSHYA +C 
Sbjct: 66  GLVPSGALLPLMQWGGRTHFVLAIVNGIHEVQELPPVFITFLAWSIGEIIRYSHYAFSCL 125

Query: 142 GVCPRWVTYLRYTAFIVLYPIGVAMGEMWVMYKALPLIKEKSPYSD 5
           G CP W+TY+RYTAFIV+YP+GV  GE+W+MY++LP+IKEK+ Y+D
Sbjct: 126 GNCPSWITYIRYTAFIVIYPVGVFPGELWLMYQSLPIIKEKNIYAD 171


>ref|XP_003606497.1| Protein-tyrosine phosphatase-like member B [Medicago truncatula]
           gi|355507552|gb|AES88694.1| Protein-tyrosine
           phosphatase-like member B [Medicago truncatula]
          Length = 290

 Score =  243 bits (619), Expect = 2e-62
 Identities = 109/166 (65%), Positives = 135/166 (81%)
 Frame = -3

Query: 502 SNFYLFAYNSFQAIGWAISLFNVLSSLVNTKSFNGAYTSAGYLICLLQTLSVLEVLHGAV 323
           S  YL AYNSFQAIGW +SL N+L +L++T S  G Y SAG LI  LQ  + LEV+HGA+
Sbjct: 6   STLYLLAYNSFQAIGWFVSLINILYNLLSTSSITGTYASAGTLISFLQCAAFLEVIHGAI 65

Query: 322 GLVPSGVLFPLMQWGGRTHWLLAIVSQISEVQELPAVFVTFFAWSLSEVIRYSHYALNCA 143
           GLVPSG L PLMQWGGRTH++LAIV+ I EVQELP VF+TF AWS+ E+IRYSHYA +C 
Sbjct: 66  GLVPSGALLPLMQWGGRTHFVLAIVNGIHEVQELPPVFITFLAWSIGEIIRYSHYAFSCL 125

Query: 142 GVCPRWVTYLRYTAFIVLYPIGVAMGEMWVMYKALPLIKEKSPYSD 5
           G CP W+TY+RYTAFIV+YP+GV  GE+W+MY++LP+IKEK+ Y+D
Sbjct: 126 GNCPSWITYIRYTAFIVIYPVGVFPGELWLMYQSLPIIKEKNIYAD 171


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