BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006425
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25589.3| unnamed protein product [Vitis vinifera]              102   2e-19
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   102   2e-19
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   100   5e-19
ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|2...   100   8e-19
ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein co...    98   3e-18

>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  102 bits (254), Expect = 2e-19
 Identities = 50/62 (80%), Positives = 55/62 (88%)
 Frame = -3

Query: 186 DHISAASATAGGIEAIHPAAGNVYFASASAGWSFTLHSFAKLYVKLHGIPFDAAKFASRL 7
           +HISAAS+TAG ++ I PAAGNV FASASAGWSFTL SFAKLYVKLHG+PFDA KFASRL
Sbjct: 242 NHISAASSTAGNVQIIDPAAGNVCFASASAGWSFTLQSFAKLYVKLHGVPFDANKFASRL 301

Query: 6   *G 1
            G
Sbjct: 302 WG 303


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  102 bits (254), Expect = 2e-19
 Identities = 50/62 (80%), Positives = 55/62 (88%)
 Frame = -3

Query: 186 DHISAASATAGGIEAIHPAAGNVYFASASAGWSFTLHSFAKLYVKLHGIPFDAAKFASRL 7
           +HISAAS+TAG ++ I PAAGNV FASASAGWSFTL SFAKLYVKLHG+PFDA KFASRL
Sbjct: 299 NHISAASSTAGNVQIIDPAAGNVCFASASAGWSFTLQSFAKLYVKLHGVPFDANKFASRL 358

Query: 6   *G 1
            G
Sbjct: 359 WG 360


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Cucumis sativus]
           gi|449493675|ref|XP_004159406.1| PREDICTED: 116 kDa U5
           small nuclear ribonucleoprotein component-like [Cucumis
           sativus]
          Length = 988

 Score =  100 bits (250), Expect = 5e-19
 Identities = 49/62 (79%), Positives = 55/62 (88%)
 Frame = -3

Query: 186 DHISAASATAGGIEAIHPAAGNVYFASASAGWSFTLHSFAKLYVKLHGIPFDAAKFASRL 7
           +HISAAS+TAG ++ I PAAGNV FASA+AGWSFTL SFAKLYVKLHGIPFDA KFA+RL
Sbjct: 299 NHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRL 358

Query: 6   *G 1
            G
Sbjct: 359 WG 360


>ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|222866009|gb|EEF03140.1|
           predicted protein [Populus trichocarpa]
          Length = 869

 Score =  100 bits (248), Expect = 8e-19
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = -3

Query: 186 DHISAASATAGGIEAIHPAAGNVYFASASAGWSFTLHSFAKLYVKLHGIPFDAAKFASRL 7
           +HISA S+TAG ++ I PAAGNV FA A+AGWSFTLHSFA+LY+KLHGIPFDA KFASRL
Sbjct: 299 NHISAVSSTAGNVQVIDPAAGNVCFAGATAGWSFTLHSFARLYLKLHGIPFDAEKFASRL 358

Query: 6   *G 1
            G
Sbjct: 359 WG 360


>ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein component, putative
           [Ricinus communis] gi|223527776|gb|EEF29877.1| 116 kD U5
           small nuclear ribonucleoprotein component, putative
           [Ricinus communis]
          Length = 992

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = -3

Query: 186 DHISAASATAGGIEAIHPAAGNVYFASASAGWSFTLHSFAKLYVKLHGIPFDAAKFASRL 7
           +HI+A S+TAG ++ I PAAGNV FASA+AGWSFTL SFAKLY+KLHGIPFDA KFASRL
Sbjct: 302 NHITAGSSTAGSVQVIDPAAGNVCFASANAGWSFTLQSFAKLYLKLHGIPFDADKFASRL 361

Query: 6   *G 1
            G
Sbjct: 362 WG 363