BLASTX nr result

ID: Coptis24_contig00006423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006423
         (2260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-08
emb|CBI22750.3| unnamed protein product [Vitis vinifera]               64   1e-07

>ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|222858894|gb|EEE96441.1|
           predicted protein [Populus trichocarpa]
          Length = 1337

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
 Frame = -3

Query: 698 DYNMEQTKAYSVEDDSSVQERNCLSPIRYPLLEVNETGLECCKGPSTVEEFNL-IEKIEY 522
           +++M++ KA ++E D SVQE+       +PLLEV E  L     PS  +EF L +E +E 
Sbjct: 190 EFDMDE-KACALEYDGSVQEQAHFHHNTFPLLEVEEMSLRTFTNPSMEDEFLLFLEHVES 248

Query: 521 RHWTQNNNLTDNGKGLLESTDIDILECLSENSPIK-CLDHELTCINLMLELDFVCLNE 351
           + W Q N L  +G  LL S   DILE LS++ P K CL+ EL  ++  L +D + + E
Sbjct: 249 K-WGQENILHIDGNELLGSMHFDILEFLSKHCPEKQCLEPELASLDTSLGMDIISMVE 305


>emb|CBI22750.3| unnamed protein product [Vitis vinifera]
          Length = 1591

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
 Frame = -3

Query: 707 IANDYNMEQTKAYSVEDDSSVQERNCLSPIRYPLLEVNETGLECCKGPSTVEEFNL-IEK 531
           I  +Y M+Q K Y +ED SS+QE+       +PLLEV+ET L      S  +E  L  E 
Sbjct: 20  ITVNYPMDQ-KTYMLEDASSIQEQIHCCHSTFPLLEVDETNLGISTTLSVDDELLLHFEN 78

Query: 530 IEYRHWTQNNNLTDNGKGLLESTDIDILECLSENSPIKCLDHELTCINLMLELD-FVCLN 354
           I+   WTQ  ++  +GK LL S +I +       S  +CL +ELT  NL LE+D F+   
Sbjct: 79  IKSHCWTQKEDVMVDGKELLGSMEIMLEYFSGHCSSKQCLKYELTSQNLFLEMDIFMSTL 138

Query: 353 ETAN------*LPRPEDTF 315
           E ++       LPR  D F
Sbjct: 139 ENSHFEGNSEFLPRISDNF 157


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