BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006415
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21323.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   187   1e-45
ref|XP_002512901.1| pentatricopeptide repeat-containing protein,...   170   1e-40
ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40

>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/138 (63%), Positives = 114/138 (82%)
 Frame = +1

Query: 1   NPLLVAQVIDPFLLHHHSLALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLI 180
           +P LVA+VIDPFLLHHHSLALGFF WASQ+P F+H S++YQS+LKSLSISRQFN VE+L+
Sbjct: 47  SPSLVARVIDPFLLHHHSLALGFFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERLL 106

Query: 181 KDIKTHNVLLHPSIYRAVIASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASD 360
           KD+K   ++L  S+YR+VIAS I+GK+ +NAF+IFN++ +   EIG + CNSL+AALASD
Sbjct: 107 KDVKAQKIVLDSSVYRSVIASHIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALASD 166

Query: 361 GYVDFAKTMFDEMFVRGI 414
           G V +A+ +FDEM   G+
Sbjct: 167 GCVVYAQRVFDEMIHHGV 184


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/138 (63%), Positives = 114/138 (82%)
 Frame = +1

Query: 1   NPLLVAQVIDPFLLHHHSLALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLI 180
           +P LVA+VIDPFLLHHHSLALGFF WASQ+P F+H S++YQS+LKSLSISRQFN VE+L+
Sbjct: 47  SPSLVARVIDPFLLHHHSLALGFFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERLL 106

Query: 181 KDIKTHNVLLHPSIYRAVIASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASD 360
           KD+K   ++L  S+YR+VIAS I+GK+ +NAF+IFN++ +   EIG + CNSL+AALASD
Sbjct: 107 KDVKAQKIVLDSSVYRSVIASHIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALASD 166

Query: 361 GYVDFAKTMFDEMFVRGI 414
           G V +A+ +FDEM   G+
Sbjct: 167 GCVVYAQRVFDEMIHHGV 184


>ref|XP_002512901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547912|gb|EEF49404.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 655

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/143 (59%), Positives = 108/143 (75%)
 Frame = +1

Query: 1   NPLLVAQVIDPFLLHHHSLALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLI 180
           +P LVAQVIDP LL HHSLALGFFNWASQQP F+H SLTY SILKSLS+SRQFN +E ++
Sbjct: 49  SPSLVAQVIDPCLLTHHSLALGFFNWASQQPGFTHNSLTYDSILKSLSLSRQFNAIEYVL 108

Query: 181 KDIKTHNVLLHPSIYRAVIASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASD 360
           K +K  N+ L  S  R VI+S I G+K ++A+++F++  S   +IG E+CNSLLA L SD
Sbjct: 109 KQVKNQNLTLDSSTQRFVISSLIRGRKTQDAYLVFSEAKSRTLDIGPEICNSLLAVLGSD 168

Query: 361 GYVDFAKTMFDEMFVRGICFSTV 429
           GY D    +FDEM +RG+ F+TV
Sbjct: 169 GYFDKGLKVFDEMLLRGVAFNTV 191


>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/143 (58%), Positives = 108/143 (75%)
 Frame = +1

Query: 1   NPLLVAQVIDPFLLHHHSLALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLI 180
           NP LV+QVIDP LL HHSLALGFFNWASQQP F+H S +Y SILKSLS+SR F  +  L+
Sbjct: 47  NPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLL 106

Query: 181 KDIKTHNVLLHPSIYRAVIASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASD 360
           K +KT  + L  S+YRAVI S I+ KK  +AF++FN++ S    IG E+CNSLLAALASD
Sbjct: 107 KQVKTQKIGLDLSVYRAVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALASD 166

Query: 361 GYVDFAKTMFDEMFVRGICFSTV 429
           G+ + A+ +FDEM ++ I F+T+
Sbjct: 167 GFFEHAQKVFDEMSLKSIPFNTL 189


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/143 (58%), Positives = 108/143 (75%)
 Frame = +1

Query: 1   NPLLVAQVIDPFLLHHHSLALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLI 180
           NP LV+QVIDP LL HHSLALGFFNWASQQP F+H S +Y SILKSLS+SR F  +  L+
Sbjct: 47  NPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLL 106

Query: 181 KDIKTHNVLLHPSIYRAVIASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASD 360
           K +KT  + L  S+YRAVI S I+ KK  +AF++FN++ S    IG E+CNSLLAALASD
Sbjct: 107 KQVKTQKIGLDLSVYRAVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALASD 166

Query: 361 GYVDFAKTMFDEMFVRGICFSTV 429
           G+ + A+ +FDEM ++ I F+T+
Sbjct: 167 GFFEHAQKVFDEMSLKSIPFNTL 189