BLASTX nr result
ID: Coptis24_contig00006413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006413
(2124 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein ... 380 0.0
ref|XP_003551034.1| PREDICTED: uncharacterized membrane protein ... 382 e-178
ref|XP_002866972.1| hypothetical protein ARALYDRAFT_912643 [Arab... 379 e-173
ref|NP_195420.2| uncharacterized protein [Arabidopsis thaliana] ... 380 e-173
gb|AAU44534.1| hypothetical protein AT4G37030 [Arabidopsis thali... 380 e-172
>ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis
vinifera] gi|296082433|emb|CBI21438.3| unnamed protein
product [Vitis vinifera]
Length = 559
Score = 380 bits (976), Expect(2) = 0.0
Identities = 174/242 (71%), Positives = 206/242 (85%), Gaps = 2/242 (0%)
Frame = -3
Query: 1723 RTNRFDVPLKITLLLALPVFFGIWLGLGIACSVLLGAGYGFFTPWVLTFEAFRQDTESGK 1544
+TNR D PLK+ L ALPV F IWL L IA SVL+G GYGFFTPWV FEAFR + E +
Sbjct: 65 KTNRLDAPLKVAFLFALPVLFAIWLALSIAGSVLVGVGYGFFTPWVSAFEAFRHENE--R 122
Query: 1543 FWHCIVDGTWDTVKTSCTVVRDFADVCNHSYPLYLKDLRK--DSDETRTLRFVHIPACIA 1370
FWHCIVDGTW+T++ SCTVVRD+AD+C HSYP +LK+ R+ SDE TLR VH+P CI
Sbjct: 123 FWHCIVDGTWETIRGSCTVVRDYADICYHSYPAFLKERRECSSSDEVHTLRLVHVPGCII 182
Query: 1369 VGLIGLLVEIPLYTIIAIVKSPYLLFIGWYRLLHDLISREGPFLETACIPIAGLTILLWP 1190
+G++GL+VEIPLYT IAIVKSPY+LF GW+RL+HDLISREGPFLETACIPIAGLTI++WP
Sbjct: 183 IGILGLVVEIPLYTAIAIVKSPYMLFKGWHRLIHDLISREGPFLETACIPIAGLTIIMWP 242
Query: 1189 LVVVGSILFAIFSSIFVALYGAVVVYQERSFRRGAAYVVAMVAEFDEYTNDWLYLREGSI 1010
L+V+GSIL AIFSS F+ LYGAV+VYQE+SF +G AYV+AMVAEFDEYTNDWLYLREG++
Sbjct: 243 LIVIGSILLAIFSSFFIGLYGAVIVYQEKSFCKGVAYVIAMVAEFDEYTNDWLYLREGTV 302
Query: 1009 LP 1004
LP
Sbjct: 303 LP 304
Score = 290 bits (741), Expect(2) = 0.0
Identities = 144/256 (56%), Positives = 191/256 (74%)
Frame = -1
Query: 999 RPRYRKKMFSHSMEFSVRRSRSTGSKLNAASTEXXXXXXXXXXPSRSVREVIQEVKVVQM 820
RPRYR+K S S E SV S G +LN S E PSRSVRE +QEV+V Q+
Sbjct: 305 RPRYRRKG-SRSSELSVGASLRAGGRLNLISVEPRGMLVPSLAPSRSVRESMQEVQVFQI 363
Query: 819 WEHMMKSCEMRGRLLMDAKVILPADLIEWSREKRNSETTIIGIGLPAYSFLRTLFHSIRA 640
WE++M+SCEMRG+ L+DA VI P DL EW K +++ I+G+GLP YS + L SI++
Sbjct: 364 WENVMRSCEMRGKELLDANVIAPDDLYEWLSAKNSNDAAIVGVGLPCYSLFQNLLFSIKS 423
Query: 639 GSDGFLLFDGVEVNHLNRPQDRLLDWFFQPIMVLKEQIKAINLGESEMRFLEKVVLCGSD 460
GS G ++ DGVEV +LN PQDRL+DWFFQPIMVLKEQIK I LGE E+R+LEK ++ G +
Sbjct: 424 GSVGLVMLDGVEVTNLNVPQDRLMDWFFQPIMVLKEQIKVIALGEGEIRYLEKFIIFGGN 483
Query: 459 TKRMEAWDNGCEVPQDPIRAAQMQGISRRLTGMTRNISMIPTYRRKYQQVVKDLISYSLE 280
T+RME+W+NG VP+D +RAAQ+QGI+RR+ G+ R++S +PTYRRK++ VVK LI+YS E
Sbjct: 484 TQRMESWNNGSFVPEDALRAAQIQGITRRMIGIVRSVSKLPTYRRKFRNVVKALIAYSFE 543
Query: 279 KEGSSKSNSMRSVASV 232
K+G+ +S+S RSVAS+
Sbjct: 544 KDGTIRSSSARSVASI 559
>ref|XP_003551034.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
max]
Length = 594
Score = 382 bits (981), Expect(2) = e-178
Identities = 178/242 (73%), Positives = 206/242 (85%), Gaps = 2/242 (0%)
Frame = -3
Query: 1723 RTNRFDVPLKITLLLALPVFFGIWLGLGIACSVLLGAGYGFFTPWVLTFEAFRQDTESGK 1544
+ + FD P+K +L+ALP FG+WLGLG+A SVL+G GYGFFTPWV TFEAFRQD ES K
Sbjct: 67 KIHMFDAPMKAAILIALPALFGLWLGLGVAGSVLVGVGYGFFTPWVSTFEAFRQDNESKK 126
Query: 1543 FWHCIVDGTWDTVKTSCTVVRDFADVCNHSYPLYLKDLRKD--SDETRTLRFVHIPACIA 1370
F HCIVDGTW T+K SCTVVRDFAD+C HSYP YLK+LR+ SDE + LR +H+P C+
Sbjct: 127 FSHCIVDGTWGTIKGSCTVVRDFADMCYHSYPSYLKELRESPASDERQRLRLIHVPGCVI 186
Query: 1369 VGLIGLLVEIPLYTIIAIVKSPYLLFIGWYRLLHDLISREGPFLETACIPIAGLTILLWP 1190
VG++GL+VEIPL+T IA+VKSPYLLF GW+RLLHDLISREGPFLE CIPIAGLTI +WP
Sbjct: 187 VGIMGLVVEIPLFTAIALVKSPYLLFKGWFRLLHDLISREGPFLEIVCIPIAGLTIFVWP 246
Query: 1189 LVVVGSILFAIFSSIFVALYGAVVVYQERSFRRGAAYVVAMVAEFDEYTNDWLYLREGSI 1010
LVV+ SIL AIFSSIFV LY +V+VYQERSFRRG AYV+AMVAEFDEYTNDWLYLREG+
Sbjct: 247 LVVIASILLAIFSSIFVGLYASVIVYQERSFRRGIAYVIAMVAEFDEYTNDWLYLREGTF 306
Query: 1009 LP 1004
LP
Sbjct: 307 LP 308
Score = 271 bits (694), Expect(2) = e-178
Identities = 136/247 (55%), Positives = 182/247 (73%)
Frame = -1
Query: 999 RPRYRKKMFSHSMEFSVRRSRSTGSKLNAASTEXXXXXXXXXXPSRSVREVIQEVKVVQM 820
+P+YRKK S S EFSVR + G+ S E PSRSV+E IQEVK+VQ+
Sbjct: 309 KPQYRKKKASQSSEFSVRGNSVRGN----TSMEPPAMLMPCLAPSRSVKETIQEVKMVQI 364
Query: 819 WEHMMKSCEMRGRLLMDAKVILPADLIEWSREKRNSETTIIGIGLPAYSFLRTLFHSIRA 640
W +MM+ CEMRG+ L+DA V+ +DL EW + K N+E I+G+GLP YS L+TL SI+A
Sbjct: 365 WGNMMRYCEMRGKELLDANVLTASDLYEWMKGKNNNEAAIVGVGLPCYSLLQTLVFSIKA 424
Query: 639 GSDGFLLFDGVEVNHLNRPQDRLLDWFFQPIMVLKEQIKAINLGESEMRFLEKVVLCGSD 460
S G LL D E+ +LNRP+D+LLDWFF P+MVLKEQI+ I LGE+E+R+LEKVVL GS+
Sbjct: 425 NSCGVLLLDDFEITYLNRPKDKLLDWFFNPVMVLKEQIRVIKLGEAELRYLEKVVLFGSN 484
Query: 459 TKRMEAWDNGCEVPQDPIRAAQMQGISRRLTGMTRNISMIPTYRRKYQQVVKDLISYSLE 280
+RMEAWDNG + D +RAAQ++GISRR+ GM R IS +PTY+RK++Q+VK L+++SLE
Sbjct: 485 KQRMEAWDNGGLMIHDALRAAQIEGISRRMIGMIRGISKLPTYKRKFRQIVKALVTHSLE 544
Query: 279 KEGSSKS 259
K+ S ++
Sbjct: 545 KDVSERA 551
>ref|XP_002866972.1| hypothetical protein ARALYDRAFT_912643 [Arabidopsis lyrata subsp.
lyrata] gi|297312808|gb|EFH43231.1| hypothetical protein
ARALYDRAFT_912643 [Arabidopsis lyrata subsp. lyrata]
Length = 569
Score = 379 bits (972), Expect(2) = e-173
Identities = 172/241 (71%), Positives = 203/241 (84%), Gaps = 2/241 (0%)
Frame = -3
Query: 1720 TNRFDVPLKITLLLALPVFFGIWLGLGIACSVLLGAGYGFFTPWVLTFEAFRQDTESGKF 1541
TNRFD+PLK+ +L+ALP FGIWLGL +A SVL+G GYGFFTPW+ FEAFRQDTES KF
Sbjct: 69 TNRFDIPLKLAILVALPALFGIWLGLSLAISVLVGVGYGFFTPWISAFEAFRQDTESNKF 128
Query: 1540 WHCIVDGTWDTVKTSCTVVRDFADVCNHSYPLYLKDLRKDS--DETRTLRFVHIPACIAV 1367
+HC+VDGTW T+K SCTVV DFAD C HSYPLYLK+LR+ DE TLR +H+P CI V
Sbjct: 129 FHCLVDGTWGTIKGSCTVVTDFADFCYHSYPLYLKELRESPAPDELETLRLIHVPGCIIV 188
Query: 1366 GLIGLLVEIPLYTIIAIVKSPYLLFIGWYRLLHDLISREGPFLETACIPIAGLTILLWPL 1187
G+IGL+++IPL+T IA+ KSPYLL GWYRL D I+REGPFLE ACIP+AGLTILLWP+
Sbjct: 189 GIIGLVIDIPLFTAIAVFKSPYLLLKGWYRLAQDAINREGPFLEIACIPVAGLTILLWPI 248
Query: 1186 VVVGSILFAIFSSIFVALYGAVVVYQERSFRRGAAYVVAMVAEFDEYTNDWLYLREGSIL 1007
+V+G +L IFSSIFV LYGAVVV+QERSFRRG +YV+A+V EFDEYTNDWLYLREG+I
Sbjct: 249 IVIGFVLMTIFSSIFVGLYGAVVVFQERSFRRGVSYVIAVVGEFDEYTNDWLYLREGTIF 308
Query: 1006 P 1004
P
Sbjct: 309 P 309
Score = 260 bits (664), Expect(2) = e-173
Identities = 138/260 (53%), Positives = 186/260 (71%), Gaps = 1/260 (0%)
Frame = -1
Query: 999 RPRYRKKMFSHSMEFSVRRSRSTGSKLNAA-STEXXXXXXXXXXPSRSVREVIQEVKVVQ 823
+PRYR + S S E SV S S++N++ S + S SVRE IQEV++VQ
Sbjct: 310 KPRYRMRRGSFSSEVSVIVHPSDVSRVNSSGSADAPAMLVPSLVHSVSVREAIQEVRMVQ 369
Query: 822 MWEHMMKSCEMRGRLLMDAKVILPADLIEWSREKRNSETTIIGIGLPAYSFLRTLFHSIR 643
+WEHMM EM+GR L+DA V+ ADL E + ++ +E++II +GLP+Y+ L TL SI+
Sbjct: 370 IWEHMMGWFEMQGRELLDAGVLTAADLYESLKGRQGNESSIINVGLPSYALLHTLLSSIK 429
Query: 642 AGSDGFLLFDGVEVNHLNRPQDRLLDWFFQPIMVLKEQIKAINLGESEMRFLEKVVLCGS 463
AG+ G LL DG EV +LNRPQD+ LDWFF PIMVLK QI+AI LGESE+R+L KVVL G+
Sbjct: 430 AGTHGVLLLDGSEVTNLNRPQDKFLDWFFNPIMVLKYQIRAIKLGESEVRYLGKVVLFGN 489
Query: 462 DTKRMEAWDNGCEVPQDPIRAAQMQGISRRLTGMTRNISMIPTYRRKYQQVVKDLISYSL 283
+RMEAWDN PQ+ +RAAQ+QGISRR+ GM R++S +PTYRR+++QVVK LI+Y L
Sbjct: 490 HEQRMEAWDNLGNPPQENLRAAQIQGISRRMMGMVRSVSKLPTYRRRFRQVVKALITYHL 549
Query: 282 EKEGSSKSNSMRSVASVDAV 223
EK+G +++ SM S ++ V
Sbjct: 550 EKQGLNRTGSMSSGDFIEEV 569
>ref|NP_195420.2| uncharacterized protein [Arabidopsis thaliana]
gi|61742737|gb|AAX55189.1| hypothetical protein At4g37030
[Arabidopsis thaliana] gi|332661339|gb|AEE86739.1|
uncharacterized protein [Arabidopsis thaliana]
Length = 569
Score = 380 bits (977), Expect(2) = e-173
Identities = 172/242 (71%), Positives = 206/242 (85%), Gaps = 2/242 (0%)
Frame = -3
Query: 1723 RTNRFDVPLKITLLLALPVFFGIWLGLGIACSVLLGAGYGFFTPWVLTFEAFRQDTESGK 1544
+TNRFD+PLK+ +L+ALP FGIWLGL +A SVL+G GYGFFTPW+ FEAFRQDTES K
Sbjct: 68 KTNRFDIPLKVAILVALPALFGIWLGLSLAISVLVGVGYGFFTPWISAFEAFRQDTESNK 127
Query: 1543 FWHCIVDGTWDTVKTSCTVVRDFADVCNHSYPLYLKDLRKD--SDETRTLRFVHIPACIA 1370
F+HC+VDGTW T+K SC VV DFAD C HSYPLYLK+LR+ SDE +TLR +H+P CI
Sbjct: 128 FFHCLVDGTWGTIKGSCIVVTDFADFCYHSYPLYLKELRESPVSDELQTLRLIHVPGCII 187
Query: 1369 VGLIGLLVEIPLYTIIAIVKSPYLLFIGWYRLLHDLISREGPFLETACIPIAGLTILLWP 1190
VG++GL+++IPL+T IA++KSPYLL GWYRL D I+REGPFLE ACIP+AGLT+LLWP
Sbjct: 188 VGILGLVIDIPLFTAIAVIKSPYLLLKGWYRLAQDAINREGPFLEIACIPVAGLTVLLWP 247
Query: 1189 LVVVGSILFAIFSSIFVALYGAVVVYQERSFRRGAAYVVAMVAEFDEYTNDWLYLREGSI 1010
+VV+G IL IFSSIFV LYGAVVV+QERSFRRG +YV+A+V EFDEYTNDWLYLREG+I
Sbjct: 248 IVVIGFILVTIFSSIFVGLYGAVVVFQERSFRRGVSYVIAVVGEFDEYTNDWLYLREGTI 307
Query: 1009 LP 1004
P
Sbjct: 308 FP 309
Score = 256 bits (655), Expect(2) = e-173
Identities = 132/253 (52%), Positives = 180/253 (71%), Gaps = 1/253 (0%)
Frame = -1
Query: 999 RPRYRKKMFSHSMEFSVRRSRSTGSKLNAA-STEXXXXXXXXXXPSRSVREVIQEVKVVQ 823
+PRYR S S E SV S +++N++ S + S SVRE IQEV++VQ
Sbjct: 310 KPRYRMGRGSFSSEVSVIVHPSDVTRVNSSGSVDAPAMLVPSLVHSVSVREAIQEVRMVQ 369
Query: 822 MWEHMMKSCEMRGRLLMDAKVILPADLIEWSREKRNSETTIIGIGLPAYSFLRTLFHSIR 643
+WEHMM EM+G+ L+DA+V+ P DL E + + +E++II +GLP+Y+ L TL SI+
Sbjct: 370 IWEHMMGWFEMQGKELLDAEVLTPTDLYESLKGRHGNESSIINVGLPSYALLHTLLSSIK 429
Query: 642 AGSDGFLLFDGVEVNHLNRPQDRLLDWFFQPIMVLKEQIKAINLGESEMRFLEKVVLCGS 463
AG G LL DG EV HLNRPQD+ LDW F PIMVLK+QI+A+ LGESE+++LEKVVL G+
Sbjct: 430 AGVHGVLLLDGSEVTHLNRPQDKFLDWVFNPIMVLKDQIRALKLGESEVKYLEKVVLFGN 489
Query: 462 DTKRMEAWDNGCEVPQDPIRAAQMQGISRRLTGMTRNISMIPTYRRKYQQVVKDLISYSL 283
+RMEAWDN PQ+ +R AQ+QGISRR+ GM R++S +PTYRR+++QVVK LI+Y
Sbjct: 490 HEQRMEAWDNHSNPPQENLRTAQIQGISRRMMGMVRSVSKLPTYRRRFRQVVKALITYYS 549
Query: 282 EKEGSSKSNSMRS 244
EK+G +++ SM S
Sbjct: 550 EKQGLNRTGSMSS 562
>gb|AAU44534.1| hypothetical protein AT4G37030 [Arabidopsis thaliana]
Length = 569
Score = 380 bits (977), Expect(2) = e-172
Identities = 172/242 (71%), Positives = 206/242 (85%), Gaps = 2/242 (0%)
Frame = -3
Query: 1723 RTNRFDVPLKITLLLALPVFFGIWLGLGIACSVLLGAGYGFFTPWVLTFEAFRQDTESGK 1544
+TNRFD+PLK+ +L+ALP FGIWLGL +A SVL+G GYGFFTPW+ FEAFRQDTES K
Sbjct: 68 KTNRFDIPLKVAILVALPALFGIWLGLSLAISVLVGVGYGFFTPWISAFEAFRQDTESNK 127
Query: 1543 FWHCIVDGTWDTVKTSCTVVRDFADVCNHSYPLYLKDLRKD--SDETRTLRFVHIPACIA 1370
F+HC+VDGTW T+K SC VV DFAD C HSYPLYLK+LR+ SDE +TLR +H+P CI
Sbjct: 128 FFHCLVDGTWGTIKGSCIVVTDFADFCYHSYPLYLKELRESPVSDELQTLRLIHVPGCII 187
Query: 1369 VGLIGLLVEIPLYTIIAIVKSPYLLFIGWYRLLHDLISREGPFLETACIPIAGLTILLWP 1190
VG++GL+++IPL+T IA++KSPYLL GWYRL D I+REGPFLE ACIP+AGLT+LLWP
Sbjct: 188 VGILGLVIDIPLFTAIAVIKSPYLLLKGWYRLAQDAINREGPFLEIACIPVAGLTVLLWP 247
Query: 1189 LVVVGSILFAIFSSIFVALYGAVVVYQERSFRRGAAYVVAMVAEFDEYTNDWLYLREGSI 1010
+VV+G IL IFSSIFV LYGAVVV+QERSFRRG +YV+A+V EFDEYTNDWLYLREG+I
Sbjct: 248 IVVIGFILVTIFSSIFVGLYGAVVVFQERSFRRGVSYVIAVVGEFDEYTNDWLYLREGTI 307
Query: 1009 LP 1004
P
Sbjct: 308 FP 309
Score = 254 bits (648), Expect(2) = e-172
Identities = 130/253 (51%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
Frame = -1
Query: 999 RPRYRKKMFSHSMEFSVRRSRSTGSKLNAA-STEXXXXXXXXXXPSRSVREVIQEVKVVQ 823
+PRYR S S E SV S +++N++ S + S SVRE IQEV++VQ
Sbjct: 310 KPRYRMGRGSFSSEVSVIVHPSDVTRVNSSGSVDAPAMLVPSLVHSVSVREAIQEVRMVQ 369
Query: 822 MWEHMMKSCEMRGRLLMDAKVILPADLIEWSREKRNSETTIIGIGLPAYSFLRTLFHSIR 643
+WEHMM EM+G+ L+DA+V+ P DL E + + +E++II +GLP+Y+ L TL SI+
Sbjct: 370 IWEHMMGWFEMQGKELLDAEVLTPTDLYESLKGRHGNESSIINVGLPSYALLHTLLSSIK 429
Query: 642 AGSDGFLLFDGVEVNHLNRPQDRLLDWFFQPIMVLKEQIKAINLGESEMRFLEKVVLCGS 463
AG G LL DG EV HLNRPQD+ LDW F PIM LK+QI+A+ LGESE+++LEKVV G+
Sbjct: 430 AGVHGVLLLDGSEVTHLNRPQDKFLDWVFNPIMALKDQIRALKLGESEVKYLEKVVFFGN 489
Query: 462 DTKRMEAWDNGCEVPQDPIRAAQMQGISRRLTGMTRNISMIPTYRRKYQQVVKDLISYSL 283
+RMEAWDN PQ+ +R AQ+QGISRR+ GM R++S +PTYRR+++QVVK LI+Y
Sbjct: 490 HEQRMEAWDNHSNPPQENLRTAQIQGISRRMMGMVRSVSKLPTYRRRFRQVVKALITYYS 549
Query: 282 EKEGSSKSNSMRS 244
EK+G +++ SM S
Sbjct: 550 EKQGLNRTGSMNS 562