BLASTX nr result

ID: Coptis24_contig00006409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006409
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45209.1| unknown [Lotus japonicus]                              340   3e-91
ref|NP_001238345.1| peroxisomal short-chain dehydrogenase/reduct...   340   3e-91
ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|1...   340   5e-91
ref|XP_002518407.1| short-chain dehydrogenase, putative [Ricinus...   338   1e-90
ref|XP_004145424.1| PREDICTED: dehydrogenase/reductase SDR famil...   336   7e-90

>gb|AFK45209.1| unknown [Lotus japonicus]
          Length = 252

 Score =  340 bits (873), Expect = 3e-91
 Identities = 177/252 (70%), Positives = 199/252 (78%)
 Frame = -2

Query: 1033 MGLMKRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEV 854
            M + KRF GKVAIVTASTQG GF IAERLG EGASVVISSRKQ+NVD A E LR KGI+V
Sbjct: 1    MEIPKRFRGKVAIVTASTQGTGFSIAERLGLEGASVVISSRKQQNVDAAAEKLRAKGIDV 60

Query: 853  FGVVCHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVK 674
              VVCHVSNAQQRKNLIDKT++KYG+IDV+VSNAAANPSV++IL TK++VLDKLWEINVK
Sbjct: 61   LAVVCHVSNAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDTVLDKLWEINVK 120

Query: 673  ASILLLKDASPHLQKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGPNTR 494
            ASILLLKDA+PH+QKGSSVV ISSIA Y P   MAMYGV              EM PNTR
Sbjct: 121  ASILLLKDAAPHMQKGSSVVIISSIAGYNPPPAMAMYGVTKTALLGLTKALAGEMAPNTR 180

Query: 493  VNTVAPGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTEDMGXXXXXXXXXXXAYITGE 314
            VN VAPGFVPT+FA +IT + ++R+ +E KT+L RLGTTEDMG           +YITGE
Sbjct: 181  VNCVAPGFVPTNFASFITSNDAMRQELEGKTILGRLGTTEDMGAATAFLASEDASYITGE 240

Query: 313  TLVVGGGMPSRL 278
            TLVV GGMPSRL
Sbjct: 241  TLVVSGGMPSRL 252


>ref|NP_001238345.1| peroxisomal short-chain dehydrogenase/reductase family protein
            [Glycine max] gi|167962017|dbj|BAG09366.1| peroxisomal
            short-chain dehydrogenase/reductase family protein
            [Glycine max]
          Length = 252

 Score =  340 bits (872), Expect = 3e-91
 Identities = 178/248 (71%), Positives = 198/248 (79%)
 Frame = -2

Query: 1021 KRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEVFGVV 842
            KRFEGKVAIVTASTQGIG  IAERLG EGASVVISSRKQ+NVD A E LR KGI+V GVV
Sbjct: 5    KRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQQNVDAAAEQLRAKGIQVLGVV 64

Query: 841  CHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVKASIL 662
            CHVS+AQQRKNLIDKT++KYG+IDV+VSNAAANPSV++IL TK+SVLDKLWEINVKA+IL
Sbjct: 65   CHVSSAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDSVLDKLWEINVKATIL 124

Query: 661  LLKDASPHLQKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGPNTRVNTV 482
            LLKDA PHLQKGSSVV ISSIA + P   +AMYGV              EM PNTRVN V
Sbjct: 125  LLKDAVPHLQKGSSVVIISSIAGFNPPPSLAMYGVTKTALLGLTKALAAEMAPNTRVNCV 184

Query: 481  APGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTEDMGXXXXXXXXXXXAYITGETLVV 302
            APGFVPT+FA +IT + +V+K +EEKTLL RLGTTEDMG           AYITGET+VV
Sbjct: 185  APGFVPTNFASFITSNDAVKKELEEKTLLGRLGTTEDMGAAAAFLASDDAAYITGETIVV 244

Query: 301  GGGMPSRL 278
             GG PSRL
Sbjct: 245  AGGTPSRL 252


>ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|118487888|gb|ABK95766.1|
            unknown [Populus trichocarpa] gi|222859658|gb|EEE97205.1|
            predicted protein [Populus trichocarpa]
          Length = 256

 Score =  340 bits (871), Expect = 5e-91
 Identities = 171/248 (68%), Positives = 197/248 (79%)
 Frame = -2

Query: 1021 KRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEVFGVV 842
            KRFEGKV IVTASTQGIGF IAER G EGASVVISSRKQKNVDEA E L+ KGI+V GVV
Sbjct: 9    KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVV 68

Query: 841  CHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVKASIL 662
            CHVSNAQQRKNLI+ T++KYG+ID++VSNAA NPS +SIL+T+ESVLDKLWEINVKA+IL
Sbjct: 69   CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAIL 128

Query: 661  LLKDASPHLQKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGPNTRVNTV 482
            LLKDA+PH++KGSSV+ ISSI  Y P   MAMYGV              EM P+TRVN +
Sbjct: 129  LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHTRVNCI 188

Query: 481  APGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTEDMGXXXXXXXXXXXAYITGETLVV 302
            APGFVPTHFAD+IT + ++RK IE++TLL RLGTT+DM            +YITGETLVV
Sbjct: 189  APGFVPTHFADFITGNQTIRKTIEDQTLLKRLGTTDDMASAVAFLASDDASYITGETLVV 248

Query: 301  GGGMPSRL 278
             GGMPSRL
Sbjct: 249  AGGMPSRL 256


>ref|XP_002518407.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223542252|gb|EEF43794.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 253

 Score =  338 bits (867), Expect = 1e-90
 Identities = 173/250 (69%), Positives = 200/250 (80%)
 Frame = -2

Query: 1027 LMKRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEVFG 848
            L KRFEGKVA+VTASTQGIGF IA RL  EGAS+V+SSRKQKNVDEAVE L+ +GI+V G
Sbjct: 4    LAKRFEGKVALVTASTQGIGFAIARRLALEGASLVVSSRKQKNVDEAVEKLQAEGIQVLG 63

Query: 847  VVCHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVKAS 668
            VVCHVSNAQ RK+LI KT+E+YG+IDVIVSNAAANPS E+IL T+ESVLDKLWEINVKAS
Sbjct: 64   VVCHVSNAQHRKHLIHKTVERYGKIDVIVSNAAANPSTEAILKTQESVLDKLWEINVKAS 123

Query: 667  ILLLKDASPHLQKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGPNTRVN 488
            ILLL+DA+P+LQKGSSV+ +SSI+ Y P   MAMYGV              EM P+TRVN
Sbjct: 124  ILLLQDAAPYLQKGSSVILVSSISGYSPPASMAMYGVTKTALLGLTKALAAEMAPDTRVN 183

Query: 487  TVAPGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTEDMGXXXXXXXXXXXAYITGETL 308
             +APGFVPTHFAD++TK+ +VRK+IEEKT LNRLGTT+DM            +YITGETL
Sbjct: 184  CIAPGFVPTHFADFLTKNEAVRKSIEEKTFLNRLGTTQDMAAAAAFLASDEASYITGETL 243

Query: 307  VVGGGMPSRL 278
            VV GGM SRL
Sbjct: 244  VVAGGMTSRL 253


>ref|XP_004145424.1| PREDICTED: dehydrogenase/reductase SDR family member 4-like [Cucumis
            sativus] gi|449531127|ref|XP_004172539.1| PREDICTED:
            dehydrogenase/reductase SDR family member 4-like [Cucumis
            sativus]
          Length = 255

 Score =  336 bits (861), Expect = 7e-90
 Identities = 171/248 (68%), Positives = 196/248 (79%)
 Frame = -2

Query: 1021 KRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEVFGVV 842
            KRFEGKVAIVTASTQGIGF IA RL  EGASVVISSR+Q+NVDEAVE L+ +G+EV G+V
Sbjct: 8    KRFEGKVAIVTASTQGIGFEIARRLAFEGASVVISSRRQRNVDEAVEKLKAQGLEVLGIV 67

Query: 841  CHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVKASIL 662
            CHVSNAQQRKNL++KTI+KYG+IDV+VSNAA NPSV+SIL TKESVLDKLW+INVKAS+L
Sbjct: 68   CHVSNAQQRKNLVEKTIQKYGKIDVVVSNAAVNPSVDSILKTKESVLDKLWDINVKASVL 127

Query: 661  LLKDASPHLQKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGPNTRVNTV 482
            LL+D +PHLQKGSSVV ISSI  Y P   +AMYGV              EM P+TRVN V
Sbjct: 128  LLQDVAPHLQKGSSVVLISSIEGYNPSSLLAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187

Query: 481  APGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTEDMGXXXXXXXXXXXAYITGETLVV 302
            APGFVPTHFAD++  + ++RK +E KTLLNRLGTTEDM            +YITGE LVV
Sbjct: 188  APGFVPTHFADFLVTNEAIRKGVESKTLLNRLGTTEDMAAATAFLASDDASYITGEILVV 247

Query: 301  GGGMPSRL 278
             GGMPSRL
Sbjct: 248  AGGMPSRL 255


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