BLASTX nr result
ID: Coptis24_contig00006396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006396 (333 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-16 ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinif... 88 6e-16 emb|CBI18194.3| unnamed protein product [Vitis vinifera] 88 6e-16 ref|XP_004154494.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM1... 88 8e-16 ref|XP_004139641.1| PREDICTED: protein FAM188A-like [Cucumis sat... 88 8e-16 >ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|222856944|gb|EEE94491.1| predicted protein [Populus trichocarpa] Length = 610 Score = 90.9 bits (224), Expect = 1e-16 Identities = 55/88 (62%), Positives = 60/88 (68%), Gaps = 7/88 (7%) Frame = +1 Query: 91 GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249 GRMD GG MFLK I VEV T L+S K+ + + VVGSESHYTVLF Sbjct: 354 GRMDFGGGMFLKGISMSVEVGFLT--LLESLNFCKVGQHLKCPKWPIWVVGSESHYTVLF 411 Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333 A DTSVQ+ENELEERES IRRAFDAQDQ Sbjct: 412 ALDTSVQDENELEERESQIRRAFDAQDQ 439 >ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinifera] Length = 337 Score = 88.2 bits (217), Expect = 6e-16 Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 7/88 (7%) Frame = +1 Query: 91 GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249 GRMD+GG M LK I + VEV T L+S K+ + + VVGSESHYTVLF Sbjct: 79 GRMDLGGGMSLKGISTCVEVGFLT--LLESLNFCKVGQFLKCPKWPIWVVGSESHYTVLF 136 Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333 A DT+VQ+ENELEERES IR+AFDAQDQ Sbjct: 137 ALDTTVQDENELEERESQIRKAFDAQDQ 164 >emb|CBI18194.3| unnamed protein product [Vitis vinifera] Length = 616 Score = 88.2 bits (217), Expect = 6e-16 Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 7/88 (7%) Frame = +1 Query: 91 GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249 GRMD+GG M LK I + VEV T L+S K+ + + VVGSESHYTVLF Sbjct: 358 GRMDLGGGMSLKGISTCVEVGFLT--LLESLNFCKVGQFLKCPKWPIWVVGSESHYTVLF 415 Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333 A DT+VQ+ENELEERES IR+AFDAQDQ Sbjct: 416 ALDTTVQDENELEERESQIRKAFDAQDQ 443 >ref|XP_004154494.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM188A-like [Cucumis sativus] Length = 597 Score = 87.8 bits (216), Expect = 8e-16 Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 7/88 (7%) Frame = +1 Query: 91 GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249 G+MD+GG M LK I VEV T L+S K+ + + VVGSESHYTVLF Sbjct: 341 GKMDLGGGMSLKGISKSVEVGFLT--LLESLNFCKVGQYLKCPKWPIWVVGSESHYTVLF 398 Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333 AFDTSVQ+ENELEERES IR+AFD QDQ Sbjct: 399 AFDTSVQDENELEERESQIRKAFDGQDQ 426 >ref|XP_004139641.1| PREDICTED: protein FAM188A-like [Cucumis sativus] Length = 607 Score = 87.8 bits (216), Expect = 8e-16 Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 7/88 (7%) Frame = +1 Query: 91 GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249 G+MD+GG M LK I VEV T L+S K+ + + VVGSESHYTVLF Sbjct: 351 GKMDLGGGMSLKGISKSVEVGFLT--LLESLNFCKVGQYLKCPKWPIWVVGSESHYTVLF 408 Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333 AFDTSVQ+ENELEERES IR+AFD QDQ Sbjct: 409 AFDTSVQDENELEERESQIRKAFDGQDQ 436