BLASTX nr result

ID: Coptis24_contig00006396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006396
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinif...    88   6e-16
emb|CBI18194.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_004154494.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM1...    88   8e-16
ref|XP_004139641.1| PREDICTED: protein FAM188A-like [Cucumis sat...    88   8e-16

>ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|222856944|gb|EEE94491.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 55/88 (62%), Positives = 60/88 (68%), Gaps = 7/88 (7%)
 Frame = +1

Query: 91  GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249
           GRMD GG MFLK I   VEV   T   L+S    K+ +  +       VVGSESHYTVLF
Sbjct: 354 GRMDFGGGMFLKGISMSVEVGFLT--LLESLNFCKVGQHLKCPKWPIWVVGSESHYTVLF 411

Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333
           A DTSVQ+ENELEERES IRRAFDAQDQ
Sbjct: 412 ALDTSVQDENELEERESQIRRAFDAQDQ 439


>ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinifera]
          Length = 337

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 7/88 (7%)
 Frame = +1

Query: 91  GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249
           GRMD+GG M LK I + VEV   T   L+S    K+ +  +       VVGSESHYTVLF
Sbjct: 79  GRMDLGGGMSLKGISTCVEVGFLT--LLESLNFCKVGQFLKCPKWPIWVVGSESHYTVLF 136

Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333
           A DT+VQ+ENELEERES IR+AFDAQDQ
Sbjct: 137 ALDTTVQDENELEERESQIRKAFDAQDQ 164


>emb|CBI18194.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 7/88 (7%)
 Frame = +1

Query: 91  GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249
           GRMD+GG M LK I + VEV   T   L+S    K+ +  +       VVGSESHYTVLF
Sbjct: 358 GRMDLGGGMSLKGISTCVEVGFLT--LLESLNFCKVGQFLKCPKWPIWVVGSESHYTVLF 415

Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333
           A DT+VQ+ENELEERES IR+AFDAQDQ
Sbjct: 416 ALDTTVQDENELEERESQIRKAFDAQDQ 443


>ref|XP_004154494.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM188A-like [Cucumis
           sativus]
          Length = 597

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 7/88 (7%)
 Frame = +1

Query: 91  GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249
           G+MD+GG M LK I   VEV   T   L+S    K+ +  +       VVGSESHYTVLF
Sbjct: 341 GKMDLGGGMSLKGISKSVEVGFLT--LLESLNFCKVGQYLKCPKWPIWVVGSESHYTVLF 398

Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333
           AFDTSVQ+ENELEERES IR+AFD QDQ
Sbjct: 399 AFDTSVQDENELEERESQIRKAFDGQDQ 426


>ref|XP_004139641.1| PREDICTED: protein FAM188A-like [Cucumis sativus]
          Length = 607

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 7/88 (7%)
 Frame = +1

Query: 91  GRMDIGGDMFLKRIPSIVEVAAGTP*FLQSWAAAKMPKMAR-------VVGSESHYTVLF 249
           G+MD+GG M LK I   VEV   T   L+S    K+ +  +       VVGSESHYTVLF
Sbjct: 351 GKMDLGGGMSLKGISKSVEVGFLT--LLESLNFCKVGQYLKCPKWPIWVVGSESHYTVLF 408

Query: 250 AFDTSVQNENELEERESHIRRAFDAQDQ 333
           AFDTSVQ+ENELEERES IR+AFD QDQ
Sbjct: 409 AFDTSVQDENELEERESQIRKAFDGQDQ 436


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