BLASTX nr result

ID: Coptis24_contig00006384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006384
         (2360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517116.1| conserved hypothetical protein [Ricinus comm...   293   2e-76
ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|2...   285   3e-74
ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245...   278   6e-72
ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210...   257   1e-65
ref|XP_002337586.1| predicted protein [Populus trichocarpa] gi|2...   256   3e-65

>ref|XP_002517116.1| conserved hypothetical protein [Ricinus communis]
            gi|223543751|gb|EEF45279.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  293 bits (749), Expect = 2e-76
 Identities = 176/321 (54%), Positives = 207/321 (64%), Gaps = 3/321 (0%)
 Frame = +3

Query: 1011 NSKQDLMAVSPYLLSPNNKHSKPGSSLFNSPMLFTGLTTKAFSET-EDLISPTSTLDAML 1187
            +SKQ LMA    +LSP  K+ KP S     P LFTG + K FSET E ++SPTS LD+  
Sbjct: 10   SSKQVLMADYSSILSPTEKYRKPTSF----PRLFTGFSFKNFSETTESVMSPTSILDSKP 65

Query: 1188 FSGLPNPFWTDKNSPIKSSQESLLDKKHPWVKKLDSRGVGLGIVDALN-DEGSDKKLSKP 1364
            FSG  NPF  D+N   K+ QES  D K  W  KLDS+G+GL IVDALN D+ +D  LSKP
Sbjct: 66   FSGFRNPFLPDQNLTPKT-QES--DTKRTW-DKLDSKGIGLAIVDALNYDDKTDSNLSKP 121

Query: 1365 DSRMVLFGSQLKXXXXXXXXXXXXETEYLQSPADFGIKTRNTQLEXXXXXXXXXXXXXXX 1544
            +SRMVLFGSQLK            ++   +SPADFGIKTR++QL                
Sbjct: 122  ESRMVLFGSQLKIQVPPLPVSPTDQSP--KSPADFGIKTRHSQLGSSSSGLSHSPVKKSV 179

Query: 1545 XXXXXEYFNSGIGGSPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIFDDCIVEDCCG 1724
                    ++    SP VF+G LSA  ME SE+YTCVI+ GPNPKTTHIFDD IVE CC 
Sbjct: 180  CGSANSSIDTS--SSPGVFNGSLSAIEMEQSEDYTCVISYGPNPKTTHIFDDYIVESCCD 237

Query: 1725 VVGFS-SLGKENSFLPDQVSYPFDDFLSFCYTCKKHLGQGKDIYIYRGEKAFCSHECRYQ 1901
            VV FS S  + N FL D  SYP D+FLSFCY CKK+LGQGKDIY+YRGEKAFCS ECRYQ
Sbjct: 238  VVEFSTSRTQTNGFLGDGSSYPSDNFLSFCYACKKNLGQGKDIYMYRGEKAFCSSECRYQ 297

Query: 1902 EILLEEGMEKSDLEDIAKNCS 1964
            E+L EEG++K D ED    CS
Sbjct: 298  EMLSEEGIDKLDHEDGYGTCS 318


>ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|222863726|gb|EEF00857.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  285 bits (730), Expect = 3e-74
 Identities = 170/316 (53%), Positives = 203/316 (64%), Gaps = 8/316 (2%)
 Frame = +3

Query: 1014 SKQDLMAVSPYLLSPNNKHSKPGSSLFNSPMLFTGLTTKAFSET-EDLISPTSTLDAMLF 1190
            SKQ LM+    + SP +K  KP S     P L TGLT K FSET E ++SPTS LD+  F
Sbjct: 11   SKQALMSQHSSIPSPTDKFRKPTSF----PKLLTGLTFKNFSETAEAIMSPTSILDSKPF 66

Query: 1191 SGLPNPFWTDKNSPIKSSQESLLDKKHPWVKKLDSRGVGLGIVDALNDEGSDKKLSKPDS 1370
            SGL NPFW D     K+ +    D +  W  KLDS+G+GLGIVDAL+DE +D  LSKP+S
Sbjct: 67   SGLKNPFWHDACPSPKTPEP---DTRRHW-DKLDSKGIGLGIVDALDDEETDSNLSKPES 122

Query: 1371 RMVLFGSQLKXXXXXXXXXXXXETEYLQSP---ADFGIKTRNTQLEXXXXXXXXXXXXXX 1541
            RMVLFGSQLK             T+  QSP    DFGIKTRN+Q                
Sbjct: 123  RMVLFGSQLKIQIPPLPPPFLSPTD--QSPKLNGDFGIKTRNSQFGSFSSGLSPSPVKKS 180

Query: 1542 XXXXXXEYFNSGIG--GSPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIFDDCIVED 1715
                     NSG+    SPRVF+G LSAS ME SE+YTCVIT GP PKTTHIFD+CIVE 
Sbjct: 181  LFGSA----NSGMDTPNSPRVFTGCLSASEMELSEDYTCVITHGPVPKTTHIFDNCIVES 236

Query: 1716 CCGVVGFSSLGKE--NSFLPDQVSYPFDDFLSFCYTCKKHLGQGKDIYIYRGEKAFCSHE 1889
            CCG VGFS+  ++  N FL D ++Y  D FLSFC +CKK+L QGKDIYIYRGE+AFCS+E
Sbjct: 237  CCGAVGFSASSRKDNNRFLGDGLTYRSDSFLSFCSSCKKNLEQGKDIYIYRGERAFCSNE 296

Query: 1890 CRYQEILLEEGMEKSD 1937
            CRYQ +LLEEG+++ D
Sbjct: 297  CRYQVMLLEEGIDEVD 312


>ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245904 [Vitis vinifera]
          Length = 307

 Score =  278 bits (710), Expect = 6e-72
 Identities = 165/320 (51%), Positives = 203/320 (63%), Gaps = 3/320 (0%)
 Frame = +3

Query: 1014 SKQDLMAVSPYLLSPNNKHSKP-GSSLFNSPMLFTGLTTKAFSETEDLISPTSTLDAMLF 1190
            SKQ LMA    L SP +K+ +P  SS F+SP LFTG ++K FSETE ++SPTS LD+  F
Sbjct: 11   SKQALMADCGSLPSPTDKYRRPPSSSFFSSPRLFTGFSSKVFSETETMMSPTSILDSKPF 70

Query: 1191 SGLPNPFWTDKNSPIKSSQESLLDKKHPWVKKLDSRGVGLGIVDALNDEGSDKKLSKPDS 1370
            SG  NPF T+  S IK S+    + +  W  KLDSR +GLGIVDAL  + SD KLSKP+S
Sbjct: 71   SGFRNPF-TNTTSTIKPSEP---EPRRHW-DKLDSRMIGLGIVDALTHDESDPKLSKPES 125

Query: 1371 RMVLFGSQLKXXXXXXXXXXXXETEYLQSPADFGIKTRNTQLEXXXXXXXXXXXXXXXXX 1550
            RMVLFGSQLK              E  +SPADFGIKTRN+QL                  
Sbjct: 126  RMVLFGSQLKIQIPPLPSSVLSPAESPKSPADFGIKTRNSQLGPFSPCLSQSPAKKSGFG 185

Query: 1551 XXXEYFNSGI--GGSPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIFDDCIVEDCCG 1724
                  NSG+    SPR+F+G LSA+ ME SE+YTCVI+ GPNP+TTHIFD+CI      
Sbjct: 186  SA----NSGLEAPNSPRIFTGCLSATEMELSEDYTCVISHGPNPRTTHIFDNCI------ 235

Query: 1725 VVGFSSLGKENSFLPDQVSYPFDDFLSFCYTCKKHLGQGKDIYIYRGEKAFCSHECRYQE 1904
             VGFS+  KEN   P       + FL+FC++C+K++GQGKDIYIYRGEKAFCS ECR +E
Sbjct: 236  -VGFSASRKENDVFP-------ESFLNFCHSCRKNIGQGKDIYIYRGEKAFCSSECRQRE 287

Query: 1905 ILLEEGMEKSDLEDIAKNCS 1964
            I+LEE ME  +  D+   CS
Sbjct: 288  IMLEERMEILEGGDVYGTCS 307


>ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210425 [Cucumis sativus]
            gi|449492592|ref|XP_004159042.1| PREDICTED:
            uncharacterized LOC101210425 [Cucumis sativus]
          Length = 294

 Score =  257 bits (656), Expect = 1e-65
 Identities = 146/300 (48%), Positives = 180/300 (60%), Gaps = 5/300 (1%)
 Frame = +3

Query: 1047 LLSPNNKHSKPGSSLFNSPMLFTGLTTKAFSETEDLISPTSTLDAMLFSGLPNPFWTDKN 1226
            L SP +   K  SS F SP LFT  ++K  SETE ++SPTS L+  L  GL N FW + N
Sbjct: 13   LPSPTSNSRKLSSSFFGSPRLFTSSSSKGLSETEAVMSPTSILEPFL--GLRNSFWGESN 70

Query: 1227 SPIKSSQESLLDKKHPWVKKLDSRGVGLGIVDALNDEGSDKKLSKPDSRMVLFGSQLKXX 1406
            SP    +  L + K PW    DS+G+GL IVD L +E SD K SKPD+RMV+ GSQLK  
Sbjct: 71   SP----RTQLTESKRPW----DSKGIGLAIVDGLTEENSDPKPSKPDTRMVVLGSQLKIQ 122

Query: 1407 XXXXXXXXXXETEYLQSPADFGIKTRNTQLEXXXXXXXXXXXXXXXXXXXXEYFNSGIGG 1586
                        +   SP +FGIKTRN+ L                       F S   G
Sbjct: 123  IPPLPPFVSPTDDSPVSPIEFGIKTRNSHL-------GSLSPVSSLSPAKKSAFGSSSSG 175

Query: 1587 -----SPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIFDDCIVEDCCGVVGFSSLGK 1751
                 SP VF+G LSA  +E SE+YTCVI+ GPNPKTTHIF DC++E  CGV  +S + K
Sbjct: 176  QETPNSPLVFTGCLSAGEIEQSEDYTCVISHGPNPKTTHIFGDCVIESGCGV--YSPVRK 233

Query: 1752 ENSFLPDQVSYPFDDFLSFCYTCKKHLGQGKDIYIYRGEKAFCSHECRYQEILLEEGMEK 1931
            EN F  D+ S+  ++FLSFC  CKK+L QGKDIY+YRGEKAFCS ECRYQE++LEE  E+
Sbjct: 234  ENGFFRDRTSFSPENFLSFCNNCKKNLEQGKDIYMYRGEKAFCSDECRYQEMMLEEEEEE 293


>ref|XP_002337586.1| predicted protein [Populus trichocarpa] gi|222839623|gb|EEE77946.1|
            predicted protein [Populus trichocarpa]
          Length = 260

 Score =  256 bits (653), Expect = 3e-65
 Identities = 149/293 (50%), Positives = 182/293 (62%), Gaps = 4/293 (1%)
 Frame = +3

Query: 1053 SPNNKHSKPGSSLFNSPMLFTGLTTKAFSET-EDLISPTSTLDAMLFSGLPNPFWTDKNS 1229
            SP +K  KP S     P L T  T K FSET E ++SPTS LD+  FSGL NPFW D N 
Sbjct: 9    SPTDKFRKPTSF----PKLLTAFTFKNFSETSEAIMSPTSILDSKPFSGLKNPFWPDPNP 64

Query: 1230 PIKSSQESLLDKKHPWVKKLDSRGVGLGIVDALNDEGSDKKLSKPDSRMVLFGSQLKXXX 1409
              K+ +    + +  W  KLD++G+GLGIVDAL+DE +D  LSKP+SR VLFGSQLK   
Sbjct: 65   SPKTPEP---ETRRHW-DKLDAKGIGLGIVDALDDEKTDSNLSKPESRTVLFGSQLKIQI 120

Query: 1410 XXXXXXXXXETEYL-QSPADFGIKTRNTQLEXXXXXXXXXXXXXXXXXXXXEYFNSGIGG 1586
                      T+   +SPA+ G++T N                                 
Sbjct: 121  PPFPPSFLSTTDQSPKSPANSGMETPN--------------------------------- 147

Query: 1587 SPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIFDDCIVEDCCGVVGFSSLGKE--NS 1760
            SPRVF+G LSAS ME SE+YTCVIT GP P+TTHIFD+CIVE CCG VGFS+  ++  N 
Sbjct: 148  SPRVFAGCLSASEMELSEDYTCVITHGPVPRTTHIFDNCIVESCCGAVGFSASSRKDNNR 207

Query: 1761 FLPDQVSYPFDDFLSFCYTCKKHLGQGKDIYIYRGEKAFCSHECRYQEILLEE 1919
            FL D ++Y  D FLSFC +CKK+L QGKDIYIYRGE+AFCS+ECRYQ +LLEE
Sbjct: 208  FLGDGLTYRSDSFLSFCSSCKKNLEQGKDIYIYRGERAFCSNECRYQVMLLEE 260


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