BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006379
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   551   e-154
ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communi...   506   e-141
ref|XP_003520572.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   488   e-135
ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|2...   487   e-135
ref|XP_003553467.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   482   e-134

>ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
            [Vitis vinifera] gi|296085216|emb|CBI28711.3| unnamed
            protein product [Vitis vinifera]
          Length = 433

 Score =  551 bits (1419), Expect = e-154
 Identities = 280/419 (66%), Positives = 335/419 (79%), Gaps = 5/419 (1%)
 Frame = -3

Query: 1376 VAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDDSGRPLHMDSIRAISFGADGRL 1197
            VAPALI++HP  K +VV+IGS+LRVFDLQ  C+ +LVDDS  PLH DSIRAI FGA+G+L
Sbjct: 17   VAPALISVHPDHKFIVVSIGSDLRVFDLQGGCSVTLVDDSSGPLHKDSIRAIRFGAEGKL 76

Query: 1196 FVSAGDDKLVKIWTTNPWHCIRTVLSEKRVSALAISPDNLFVSFADKFGVVWVVSTEVDD 1017
            FVSAGDDKLVKIW  N WHCI TV SEKRVSA+AIS D LFV FADKFGVVW ++ +  D
Sbjct: 77   FVSAGDDKLVKIWNANSWHCISTVCSEKRVSAVAISKDGLFVCFADKFGVVWALNLDGFD 136

Query: 1016 ERK----DKASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEIQS 849
            E +     KA+P+ AHYCSIITSLEFS DGRFI+SADRDFKIRV+VFPK+PL GAHEIQS
Sbjct: 137  ENQVLVDKKAAPVLAHYCSIITSLEFSLDGRFIISADRDFKIRVSVFPKKPLDGAHEIQS 196

Query: 848  FCLGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLLDTCEVGMEAGLLESD 669
            FCLGHTEFV+CL+FVC  +YP+GFL+SGSGDSTVRLWDITSG LLDTCEVG +AG LES+
Sbjct: 197  FCLGHTEFVSCLAFVCAPDYPEGFLVSGSGDSTVRLWDITSGSLLDTCEVGSQAGFLESN 256

Query: 668  DKEETLCPAITDICASPDGSLIAVAIQSLHGVVLLSCNLSGRTLSITKVVSM-GGTFIPT 492
             + E    A+ D+C +PDG+L+A AIQSL G++LL+CN+S ++LSI KVVS+ GG+FIPT
Sbjct: 257  GRGEEHYSAVIDLCTTPDGTLVAAAIQSLQGIMLLNCNISAKSLSIAKVVSITGGSFIPT 316

Query: 491  SLAMSSSAEHLWIVTGASNLPALDSPSFARVSVISGLKKHGSDSSDDKPVVLDDNEIPGG 312
            SL  +S AE LW+VTG S L  LDS S ARV VISG +    DS + +P +L+D+EIPGG
Sbjct: 317  SLGTASCAEFLWMVTGVSTLHGLDSHSLARVRVISGFRISSPDSVEHEPTMLEDDEIPGG 376

Query: 311  SKLLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEKRELRKKSRNDRKLKQ 135
             KLLEKLQGSVSI            AVK+AM NLLIK+QYS +KRE RK++RND+K+KQ
Sbjct: 377  EKLLEKLQGSVSIEN--KVFSAAAEAVKMAMCNLLIKKQYSADKREFRKRTRNDKKIKQ 433


>ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communis]
            gi|223535946|gb|EEF37605.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 435

 Score =  506 bits (1303), Expect = e-141
 Identities = 268/420 (63%), Positives = 319/420 (75%), Gaps = 6/420 (1%)
 Frame = -3

Query: 1376 VAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDD-SGRPLHMDSIRAISFGADGR 1200
            VAPALI++HP + SV VA+GS+LRVFDLQ  C   LVD+ S  PLH DSIRAI + A+G+
Sbjct: 19   VAPALISVHPTQNSVAVAVGSDLRVFDLQGGCGVCLVDNNSSEPLHKDSIRAIRYSANGK 78

Query: 1199 LFVSAGDDKLVKIWTTNPWHCIRTVLSEKRVSALAISPDNLFVSFADKFGVVWVVST-EV 1023
            LFVSAGDDKLV IW+T+ W C+ +V SEKRVSA+AIS D L+V FADKFGVVWVV   E+
Sbjct: 79   LFVSAGDDKLVNIWSTDSWGCVSSVCSEKRVSAVAISNDGLYVCFADKFGVVWVVDLHEL 138

Query: 1022 DDERK---DKASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEIQ 852
            +  +     KASP+ AHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPK+ L GAHEIQ
Sbjct: 139  EGNQSLVNKKASPLLAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKKTLDGAHEIQ 198

Query: 851  SFCLGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLLDTCEVGMEAGLLES 672
            SFCLGHTEFV+CL+F+   +YPQG L+SGSGDSTVRLWDIT+G LLDTCEVG + G L+S
Sbjct: 199  SFCLGHTEFVSCLAFIWAADYPQGLLVSGSGDSTVRLWDITAGRLLDTCEVGAKTGCLDS 258

Query: 671  DDKEETLCPAITDICASPDGSLIAVAIQSLHGVVLLSCNLSGRTLSITKVV-SMGGTFIP 495
               +E  C A+TD+C  P+ +L+AVAIQSL G++LLSC+L  ++L + KVV  MG  FIP
Sbjct: 259  SKNDED-CSAVTDLCTIPNDNLVAVAIQSLQGIMLLSCDLDSQSLHVIKVVFVMGENFIP 317

Query: 494  TSLAMSSSAEHLWIVTGASNLPALDSPSFARVSVISGLKKHGSDSSDDKPVVLDDNEIPG 315
            TSL  SSSAE +W+VTG S L   D  S ARV V+SG  K   DS+D +  VL DNE+PG
Sbjct: 318  TSLGSSSSAELIWMVTGVSKLQGSDHNSLARVRVLSGFTKSIPDSTDGELHVLGDNEVPG 377

Query: 314  GSKLLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEKRELRKKSRNDRKLKQ 135
              KLLEKLQGSV I +          AVK AM NLLIK+QY+ EKRE RK+ RNDRK+KQ
Sbjct: 378  AEKLLEKLQGSVFIDE--KVFQAAAEAVKTAMCNLLIKKQYTTEKREFRKRGRNDRKVKQ 435


>ref|XP_003520572.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
            [Glycine max]
          Length = 419

 Score =  488 bits (1257), Expect = e-135
 Identities = 261/416 (62%), Positives = 305/416 (73%), Gaps = 3/416 (0%)
 Frame = -3

Query: 1376 VAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDDSGR--PLHMDSIRAISFGADG 1203
            VAPALIA+HP + SV VA+G  LRVFDL    A+SL DDS    P H D+IRAI FGA G
Sbjct: 11   VAPALIAVHPDQSSVAVAVGPHLRVFDLLSGSAASLTDDSDGAVPFHKDNIRAIRFGAKG 70

Query: 1202 RLFVSAGDDKLVKIWTTNPWHCIRTVLSEKRVSALAISPDNLFVSFADKFGVVWVVSTEV 1023
            +LFVSAGDDK +K+W+T  W CI TV SEKRV+A+AIS D  FV FADKFGVVWVV  + 
Sbjct: 71   KLFVSAGDDKTLKVWSTQSWRCITTVSSEKRVTAVAISDDGTFVCFADKFGVVWVVDLDP 130

Query: 1022 DDERKDKASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEIQSFC 843
                  K +P+ +HYCSIITSLEFSPDGR+I+SADRDFKIRVT FPK+PL+GA +IQSFC
Sbjct: 131  PLHDDKKPAPLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTNFPKKPLNGAQQIQSFC 190

Query: 842  LGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLLDTCEVGMEAGLLESDDK 663
            LGHTEFV+CL+F+  QE PQGFLLSGSGDSTVRLW+I SG LLDTCEV ++AGLLES+ K
Sbjct: 191  LGHTEFVSCLAFIQAQECPQGFLLSGSGDSTVRLWNIDSGALLDTCEVAIKAGLLESNGK 250

Query: 662  EETLCPAITDICASPDGSLIAVAIQSLHGVVLLSCNLSGRTLSITKVVSMGG-TFIPTSL 486
             E    A+TD+C   DG L+AVAIQSL G+VLLSCN+S +TLS+ KVVS+ G  F+PT L
Sbjct: 251  AEERGHAVTDLCTVLDGLLVAVAIQSLQGIVLLSCNVSAQTLSVAKVVSVAGEAFVPTCL 310

Query: 485  AMSSSAEHLWIVTGASNLPALDSPSFARVSVISGLKKHGSDSSDDKPVVLDDNEIPGGSK 306
              S S   LW+VTG S LP  + PS A V VIS +        + +PVVL D+ IPGG K
Sbjct: 311  GSSPSIGKLWMVTGVSGLPGFNYPSLACVRVISSI------DVEKEPVVLGDDNIPGGEK 364

Query: 305  LLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEKRELRKKSRNDRKLK 138
            LLE LQGS S+            AVK AM NLLIK+QY  E RE RKKSRNDRKLK
Sbjct: 365  LLETLQGSASVDDN--AFLAAAEAVKTAMCNLLIKKQYPSENREYRKKSRNDRKLK 418


>ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|222857043|gb|EEE94590.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  487 bits (1253), Expect = e-135
 Identities = 258/426 (60%), Positives = 312/426 (73%), Gaps = 12/426 (2%)
 Frame = -3

Query: 1376 VAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDDSGRPLHMDSIRAISFGADGRL 1197
            VAPALI++HP + SV VA+GS+LR FDL+ +C  +LVD++G   H DSIRAI +GA G+L
Sbjct: 17   VAPALISVHPTQDSVAVAVGSDLRFFDLRGNCGVTLVDETGEAFHKDSIRAIRYGAKGKL 76

Query: 1196 FVSAGDDKLVKIWTTNPWHCIRTVLSEKRVSALAISPDNLFVSFADKFGVVWVVSTEVDD 1017
            FVSAGDDKLVK+W+T+ W CI +V SEKRVSA+AIS D L+V FADKFGVVWVV     D
Sbjct: 77   FVSAGDDKLVKVWSTDSWRCIASVCSEKRVSAVAISNDGLYVCFADKFGVVWVVDLRGLD 136

Query: 1016 ERKD----KASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEIQS 849
              +     KA+P+ AHYCSIITSLEFSPDG FIV+ADRDFKIRVTVFPK+PL GAHEIQS
Sbjct: 137  GNETLVNKKAAPLLAHYCSIITSLEFSPDGWFIVTADRDFKIRVTVFPKKPLDGAHEIQS 196

Query: 848  FCLGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLLDTCEVGMEAG--LLE 675
            FCLGHTEFV+CL+F+ T +YPQGFL+SGSGDSTVRLWDI SG LLDTCEVG +     L 
Sbjct: 197  FCLGHTEFVSCLAFLVTVDYPQGFLVSGSGDSTVRLWDINSGTLLDTCEVGSKVSHFFLN 256

Query: 674  SDDKEETLCPAITDICASPDGSLIAVAIQ---SLHG--VVLLSCNLSGRTLSITKVVS-M 513
              D  E  C  +TD+C  P  + +AVAIQ   S H   ++L+SC+LS +T    KVVS M
Sbjct: 257  YYDGSEVSCSTVTDLCTIPGSNFVAVAIQRHVSKHSACILLVSCDLSSQTFGAVKVVSNM 316

Query: 512  GGTFIPTSLAMSSSAEHLWIVTGASNLPALDSPSFARVSVISGLKKHGSDSSDDKPVVLD 333
            G +FIPTSL  SSSAE LW +TG S L   D  S A V V+SG KK   D++  +  +LD
Sbjct: 317  GDSFIPTSLGCSSSAELLWTITGVSKLHGSDHNSLACVRVLSGFKKTIPDAAGPELTLLD 376

Query: 332  DNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEKRELRKKSRN 153
            DNE+PG  KLLEKLQGSV++ +          AVK +M NLLIK+QY+ EKRE RK+ RN
Sbjct: 377  DNEVPGAEKLLEKLQGSVTVEE--EVFLAAAEAVKTSMCNLLIKKQYTTEKREFRKRGRN 434

Query: 152  DRKLKQ 135
            D+K KQ
Sbjct: 435  DKKTKQ 440


>ref|XP_003553467.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
            [Glycine max]
          Length = 417

 Score =  482 bits (1241), Expect = e-134
 Identities = 262/416 (62%), Positives = 306/416 (73%), Gaps = 3/416 (0%)
 Frame = -3

Query: 1376 VAPALIAIHPVEKSVVVAIGSELRVFDLQEDCASSLVDDSG-RPLHMDSIRAISFGADGR 1200
            VAPALIA+HP + SV VA+G  LRVFDL    A+SL DDS   PLH ++IRAI FGA G+
Sbjct: 11   VAPALIAVHPDQSSVAVAVGPHLRVFDLLSGSAASLTDDSDCAPLHKNNIRAIRFGAKGK 70

Query: 1199 LFVSAGDDKLVKIWTTNPWHCIRTVLSEKRVSALAISPDNLFVSFADKFGVVWVVSTEVD 1020
            LFVSAGDDK VK+W+T  W CI TV SEKRV+A+AIS D  FV FADKFGVVWVV  +VD
Sbjct: 71   LFVSAGDDKTVKVWSTQSWRCITTVSSEKRVTAVAISNDGTFVCFADKFGVVWVV--DVD 128

Query: 1019 DERKDKA-SPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPLSGAHEIQSFC 843
                DK  +P+ +HYCSIITSLEFSPDGRFI+SADRDFKIRVT FP++PL+GAH+IQSFC
Sbjct: 129  PPLHDKKPAPLLSHYCSIITSLEFSPDGRFILSADRDFKIRVTNFPQKPLNGAHQIQSFC 188

Query: 842  LGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLLDTCEVGMEAGLLESDDK 663
            LGHTEFV+CL+F+  QE PQG LLSGSGDSTVRLW+I SG LLDTCEV ++AGLLES+ K
Sbjct: 189  LGHTEFVSCLAFIQAQECPQGLLLSGSGDSTVRLWNIDSGALLDTCEVAIKAGLLESNGK 248

Query: 662  EETLCPAITDICASPDGSLIAVAIQSLHGVVLLSCNLSGRTLSITKVVSMGG-TFIPTSL 486
             E    A+ D+C   DG ++AVAIQSL G+VLLSCN+  +TLS  KVVS+ G  F+PT L
Sbjct: 249  AEEHGHAVIDLCTVLDGLIVAVAIQSLQGIVLLSCNVCAQTLSFAKVVSVAGEAFVPTCL 308

Query: 485  AMSSSAEHLWIVTGASNLPALDSPSFARVSVISGLKKHGSDSSDDKPVVLDDNEIPGGSK 306
              S S   LW+VTG S LP  +  S ARV VISG+        + +PVV  D+ IPGG K
Sbjct: 309  GSSPSIRKLWMVTGVSGLPGCNYLSLARVRVISGI------DVEQEPVVPGDDNIPGGEK 362

Query: 305  LLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEKRELRKKSRNDRKLK 138
            LLE LQGS S+            AVK AM NLLIK+QY  E RE RKKSRNDRKLK
Sbjct: 363  LLETLQGSASVDDS--AFLATAEAVKTAMCNLLIKKQYPSENREYRKKSRNDRKLK 416