BLASTX nr result

ID: Coptis24_contig00006377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006377
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplast...   220   1e-55
emb|CBI27216.3| unnamed protein product [Vitis vinifera]              220   1e-55
emb|CAN83127.1| hypothetical protein VITISV_029535 [Vitis vinifera]   220   1e-55
ref|XP_002326632.1| predicted protein [Populus trichocarpa] gi|2...   214   8e-54
ref|XP_002532138.1| conserved hypothetical protein [Ricinus comm...   213   1e-53

>ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplastic-like [Vitis
           vinifera]
          Length = 492

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/127 (82%), Positives = 117/127 (92%)
 Frame = +1

Query: 1   GQTRLKVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLENFCKHPEDFLSYDGQCNGFSV 180
           GQTRLKVTVRGSQGHAGTVPM+MR+DPMAAAAELIVLLE+ CK P+DFLSYDGQCNGF+V
Sbjct: 270 GQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVLLESLCKRPKDFLSYDGQCNGFAV 329

Query: 181 ESLSKSLVCTVGEISIWPGASNVIPGQVTFSVDIRAMDDMAREAIIYELSKRMYEACERR 360
           ESLS SLVCTVGEIS WP ASNVIPGQVTF+VD+RA+DDM REA++YELS RMY+ CE+R
Sbjct: 330 ESLSGSLVCTVGEISSWPSASNVIPGQVTFTVDLRAIDDMGREAVLYELSDRMYQICEKR 389

Query: 361 SVHCVIE 381
           SV C IE
Sbjct: 390 SVSCTIE 396


>emb|CBI27216.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/127 (82%), Positives = 117/127 (92%)
 Frame = +1

Query: 1   GQTRLKVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLENFCKHPEDFLSYDGQCNGFSV 180
           GQTRLKVTVRGSQGHAGTVPM+MR+DPMAAAAELIVLLE+ CK P+DFLSYDGQCNGF+V
Sbjct: 256 GQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVLLESLCKRPKDFLSYDGQCNGFAV 315

Query: 181 ESLSKSLVCTVGEISIWPGASNVIPGQVTFSVDIRAMDDMAREAIIYELSKRMYEACERR 360
           ESLS SLVCTVGEIS WP ASNVIPGQVTF+VD+RA+DDM REA++YELS RMY+ CE+R
Sbjct: 316 ESLSGSLVCTVGEISSWPSASNVIPGQVTFTVDLRAIDDMGREAVLYELSDRMYQICEKR 375

Query: 361 SVHCVIE 381
           SV C IE
Sbjct: 376 SVSCTIE 382


>emb|CAN83127.1| hypothetical protein VITISV_029535 [Vitis vinifera]
          Length = 321

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/127 (82%), Positives = 117/127 (92%)
 Frame = +1

Query: 1   GQTRLKVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLENFCKHPEDFLSYDGQCNGFSV 180
           GQTRLKVTVRGSQGHAGTVPM+MR+DPMAAAAELIVLLE+ CK P+DFLSYDGQCNGF+V
Sbjct: 99  GQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVLLESLCKRPKDFLSYDGQCNGFAV 158

Query: 181 ESLSKSLVCTVGEISIWPGASNVIPGQVTFSVDIRAMDDMAREAIIYELSKRMYEACERR 360
           ESLS SLVCTVGEIS WP ASNVIPGQVTF+VD+RA+DDM REA++YELS RMY+ CE+R
Sbjct: 159 ESLSGSLVCTVGEISSWPSASNVIPGQVTFTVDLRAIDDMGREAVLYELSDRMYQICEKR 218

Query: 361 SVHCVIE 381
           SV C IE
Sbjct: 219 SVSCTIE 225


>ref|XP_002326632.1| predicted protein [Populus trichocarpa] gi|222833954|gb|EEE72431.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  214 bits (544), Expect = 8e-54
 Identities = 101/127 (79%), Positives = 116/127 (91%)
 Frame = +1

Query: 1   GQTRLKVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLENFCKHPEDFLSYDGQCNGFSV 180
           GQTRLKVTVRGSQGHAGTVPM++R+DPMAA+AELI+LLE+ CK+P+DFLSYDG CN  +V
Sbjct: 249 GQTRLKVTVRGSQGHAGTVPMSLRQDPMAASAELIMLLESLCKNPKDFLSYDGHCNDSTV 308

Query: 181 ESLSKSLVCTVGEISIWPGASNVIPGQVTFSVDIRAMDDMAREAIIYELSKRMYEACERR 360
           ESLS SLVCTVGEIS WP ASNVIPGQVTF+VD+RAMD+M REA++YELS RMYE CERR
Sbjct: 309 ESLSNSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDNMGREAVLYELSNRMYEICERR 368

Query: 361 SVHCVIE 381
           SV C+IE
Sbjct: 369 SVSCIIE 375


>ref|XP_002532138.1| conserved hypothetical protein [Ricinus communis]
           gi|223528174|gb|EEF30237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score =  213 bits (543), Expect = 1e-53
 Identities = 99/127 (77%), Positives = 117/127 (92%)
 Frame = +1

Query: 1   GQTRLKVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLENFCKHPEDFLSYDGQCNGFSV 180
           GQTRLKVTV+GSQGHAGTVPM++R+DPMAAAAELIVLLE+ CK+P+DFLSYD QCNG ++
Sbjct: 214 GQTRLKVTVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKYPKDFLSYDSQCNGSTL 273

Query: 181 ESLSKSLVCTVGEISIWPGASNVIPGQVTFSVDIRAMDDMAREAIIYELSKRMYEACERR 360
           ESLS SLVCTVGEIS WP ASNVIPGQVTF+VD+RAMDDM R+A++YELS R+Y+ C+RR
Sbjct: 274 ESLSSSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGRDAVLYELSNRIYQICDRR 333

Query: 361 SVHCVIE 381
           SV C+IE
Sbjct: 334 SVSCIIE 340


Top