BLASTX nr result

ID: Coptis24_contig00006370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006370
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ00904.1| putative mitochondrial substrate carrier protein,...   189   2e-46
ref|XP_002319020.1| predicted protein [Populus trichocarpa] gi|2...   189   4e-46
ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|2...   189   4e-46
gb|ABK94317.1| unknown [Populus trichocarpa]                          189   4e-46
ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative...   187   2e-45

>gb|AEZ00904.1| putative mitochondrial substrate carrier protein, partial [Elaeis
           guineensis]
          Length = 299

 Score =  189 bits (481), Expect = 2e-46
 Identities = 98/142 (69%), Positives = 109/142 (76%)
 Frame = -1

Query: 426 GMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSXXXXXXXXXX 247
           G+D ESLTEATSGA+GAL+S ++LYPLDTCKTKYQAEVR H +QKYR LS          
Sbjct: 1   GVDWESLTEATSGAVGALVSNTVLYPLDTCKTKYQAEVRSHGRQKYRNLS---------- 50

Query: 246 XXXXXXXXXXXXXXXXDVLWEAISTGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLY 67
                           DVLWEAIST QVLSLYQGLGTKNLQSFISQFVYFYGY+YFKRLY
Sbjct: 51  ----------------DVLWEAISTRQVLSLYQGLGTKNLQSFISQFVYFYGYNYFKRLY 94

Query: 66  LERSGTKSIGTRANLILAAAAG 1
           LERSG KS+GT+ANL++AAAAG
Sbjct: 95  LERSGAKSVGTKANLVVAAAAG 116


>ref|XP_002319020.1| predicted protein [Populus trichocarpa] gi|222857396|gb|EEE94943.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  189 bits (479), Expect = 4e-46
 Identities = 97/143 (67%), Positives = 109/143 (76%)
 Frame = -1

Query: 429 LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSXXXXXXXXX 250
           +G+DLESL+EATSGAIG+LLST+ILYPLDTCKTKYQAE RDH QQKYR L+         
Sbjct: 1   MGVDLESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEARDHGQQKYRNLT--------- 51

Query: 249 XXXXXXXXXXXXXXXXXDVLWEAISTGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRL 70
                            DVLWEAIST QVLSLYQGLGTKNLQSF SQF+YFYGYSYFKRL
Sbjct: 52  -----------------DVLWEAISTRQVLSLYQGLGTKNLQSFFSQFIYFYGYSYFKRL 94

Query: 69  YLERSGTKSIGTRANLILAAAAG 1
           YLE+SG++ IGT+ NL +AAAAG
Sbjct: 95  YLEKSGSRKIGTKVNLFIAAAAG 117


>ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|222838276|gb|EEE76641.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  189 bits (479), Expect = 4e-46
 Identities = 98/143 (68%), Positives = 111/143 (77%)
 Frame = -1

Query: 429 LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSXXXXXXXXX 250
           +G+DLES++EATSGAIG+LLST+ILYPLDTCKTKYQAE R H QQKYR+L+         
Sbjct: 1   MGVDLESVSEATSGAIGSLLSTTILYPLDTCKTKYQAEARAHGQQKYRKLT--------- 51

Query: 249 XXXXXXXXXXXXXXXXXDVLWEAISTGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRL 70
                            DVLWEAIST QVLSLYQG+GTKNLQSFISQFVYFYGYSYFKRL
Sbjct: 52  -----------------DVLWEAISTRQVLSLYQGIGTKNLQSFISQFVYFYGYSYFKRL 94

Query: 69  YLERSGTKSIGTRANLILAAAAG 1
           Y+E+SG K IGT+ANLI+AAAAG
Sbjct: 95  YMEKSGFKKIGTKANLIIAAAAG 117


>gb|ABK94317.1| unknown [Populus trichocarpa]
          Length = 239

 Score =  189 bits (479), Expect = 4e-46
 Identities = 97/143 (67%), Positives = 109/143 (76%)
 Frame = -1

Query: 429 LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSXXXXXXXXX 250
           +G+DLESL+EATSGAIG+LLST+ILYPLDTCKTKYQAE RDH QQKYR L+         
Sbjct: 1   MGVDLESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEARDHGQQKYRNLT--------- 51

Query: 249 XXXXXXXXXXXXXXXXXDVLWEAISTGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRL 70
                            DVLWEAIST QVLSLYQGLGTKNLQSF SQF+YFYGYSYFKRL
Sbjct: 52  -----------------DVLWEAISTRQVLSLYQGLGTKNLQSFFSQFIYFYGYSYFKRL 94

Query: 69  YLERSGTKSIGTRANLILAAAAG 1
           YLE+SG++ IGT+ NL +AAAAG
Sbjct: 95  YLEKSGSRKIGTKVNLFIAAAAG 117


>ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative [Ricinus communis]
           gi|223548333|gb|EEF49824.1| peroxisomal membrane protein
           pmp34, putative [Ricinus communis]
          Length = 318

 Score =  187 bits (474), Expect = 2e-45
 Identities = 99/143 (69%), Positives = 110/143 (76%)
 Frame = -1

Query: 429 LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSXXXXXXXXX 250
           + +DLESL+EATSGAIG+LLST+ILYPLDTCKTKYQAEVR H Q+KYR LS         
Sbjct: 1   MAVDLESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQRKYRHLS--------- 51

Query: 249 XXXXXXXXXXXXXXXXXDVLWEAISTGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRL 70
                            DVL+EAIS GQ+LSLYQGLGTKNLQSFISQFVYFYGYSYFKRL
Sbjct: 52  -----------------DVLFEAISNGQILSLYQGLGTKNLQSFISQFVYFYGYSYFKRL 94

Query: 69  YLERSGTKSIGTRANLILAAAAG 1
           YLE+SG K IGT+ANL+LAAAAG
Sbjct: 95  YLEKSGFKKIGTKANLVLAAAAG 117


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