BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006362
         (2426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   733   0.0  
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   711   0.0  
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   701   0.0  
ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   681   0.0  
ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   677   0.0  

>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
            vinifera]
          Length = 540

 Score =  733 bits (1891), Expect = 0.0
 Identities = 373/533 (69%), Positives = 439/533 (82%), Gaps = 7/533 (1%)
 Frame = -3

Query: 2385 EGNVKATSSSVSNDVEDT---VKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSL 2215
            +GN    S  +++D E T   VKERCWDQREA+ GEP CVICGRYGEYICDETDDD+CSL
Sbjct: 6    KGNQGKNSVELTDDNEGTADGVKERCWDQREALPGEPKCVICGRYGEYICDETDDDICSL 65

Query: 2214 ECKQTVLSNLAKCWKPEKPAPPVRLPVTDECFYVRD-GDKSGAQHLTSDQIALLRSKIEI 2038
            ECKQT+L  +AK   P    PP RLP TDECFYVRD GDKSG+Q LT  Q  +LR ++EI
Sbjct: 66   ECKQTLLCRVAKSRLPVVLPPPKRLPTTDECFYVRDSGDKSGSQSLTGSQTEMLRRRLEI 125

Query: 2037 RVKGDSIPPPILAFSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGS 1858
             V+GD    PIL+FSSCNLP+KL  N+EAAGYE+PTPVQMQ+IPAAL GKNLLVSA+TGS
Sbjct: 126  CVRGDFDLSPILSFSSCNLPQKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLLVSADTGS 185

Query: 1857 GKTASFLVPVVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTAL 1678
            GKTASFLVP+VS CT+ R  +    KNP+AMVL PTRELC+Q+EEQAKL G+GLPFKTAL
Sbjct: 186  GKTASFLVPIVSRCTSIRPDHSPNQKNPLAMVLTPTRELCMQVEEQAKLLGKGLPFKTAL 245

Query: 1677 VVGGEAMSGQIYRIQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXDCMLQRGFRD 1498
            VVGG+AM  Q++RIQQGVELIVGTPGRLIDL +KH+I             DCML+RGFRD
Sbjct: 246  VVGGDAMPRQLHRIQQGVELIVGTPGRLIDLLSKHEIELDDVFMLVLDEVDCMLERGFRD 305

Query: 1497 QVIQIFQALFKPQILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVES 1318
            QV+QI++AL +PQ+LMYSATIS EVEK+ASSMAKD+I IS+GK NRP  +VKQ+ IWVES
Sbjct: 306  QVMQIYRALSQPQVLMYSATISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQLAIWVES 365

Query: 1317 KKKKQKLFEIIMSQQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRE 1138
            K+KKQKLF+I+ S+QHF PPVVVFV S+LGA+LL+EAIT+TTG+K LSIHG+K MKERRE
Sbjct: 366  KQKKQKLFDILTSKQHFTPPVVVFVGSRLGADLLTEAITITTGLKALSIHGEKSMKERRE 425

Query: 1137 TLRQFLMGEVSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAM 958
             +  FL+GEV V+VATGVL RGVDLL VRQVIVFDMPNSIKEY+HQIGRASRLGEEG A+
Sbjct: 426  IMSSFLVGEVPVMVATGVLSRGVDLLSVRQVIVFDMPNSIKEYVHQIGRASRLGEEGTAI 485

Query: 957  AFVNEENKNLFQELVEVLKSSRAVVPRELANSRYTMASYSIGK---RQKKRKY 808
             F+NEEN+NLF ELVE+LKSS A +PRELANSRY + S ++G+   RQKKRK+
Sbjct: 486  LFLNEENRNLFPELVEILKSSGAAIPRELANSRYRLGSVNVGRGQIRQKKRKH 538


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  711 bits (1836), Expect = 0.0
 Identities = 355/517 (68%), Positives = 421/517 (81%)
 Frame = -3

Query: 2358 SVSNDVEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLSNLAK 2179
            +VS    D VK+   DQREA+ GEP+CV+CGRYGEYICD+TD D+CSLECKQT+L   A 
Sbjct: 10   TVSEAAGDDVKKTSRDQREALPGEPICVVCGRYGEYICDQTDSDICSLECKQTLLGRAAD 69

Query: 2178 CWKPEKPAPPVRLPVTDECFYVRDGDKSGAQHLTSDQIALLRSKIEIRVKGDSIPPPILA 1999
               P     P RL  TDECFYVRD +      LTSDQ  LLR K+EI VKGDS+P PIL+
Sbjct: 70   THLPVGHPLPKRLAATDECFYVRDSESP----LTSDQTELLRRKLEIHVKGDSVPDPILS 125

Query: 1998 FSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLVPVVSL 1819
            FSSCNLPEKL  N++  GY++PTP+QMQ I AALTGK+LL SA+TGSGKTASFLVPVVS 
Sbjct: 126  FSSCNLPEKLLHNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSR 185

Query: 1818 CTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMSGQIYR 1639
            C  FR  N +K K P+AMVL PTRELC+Q+EEQAKL G+GLPFKTALV+GG+AM  Q+YR
Sbjct: 186  CATFRHGNISKSKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVIGGDAMPRQLYR 245

Query: 1638 IQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXDCMLQRGFRDQVIQIFQALFKPQ 1459
            IQQGVELIVGTPGRLIDL  KHDI             DCMLQ+GFRDQV+QIF+AL +PQ
Sbjct: 246  IQQGVELIVGTPGRLIDLLAKHDIELDDIMILVLDEVDCMLQQGFRDQVMQIFRALSQPQ 305

Query: 1458 ILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVESKKKKQKLFEIIMS 1279
            +LMYSAT+S EVEKMASSMAKDLI++SIG+PNRP ++VKQ+ IWVESK+KKQKLF+I+MS
Sbjct: 306  VLMYSATMSQEVEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLFDILMS 365

Query: 1278 QQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMGEVSVI 1099
            +QHF PP +V+V S++GA+LLS AITVTTG+K LSIHG+K MKERRE ++ FL+GEV ++
Sbjct: 366  KQHFLPPSIVYVGSRIGADLLSNAITVTTGLKALSIHGEKSMKERREIMKSFLVGEVPLV 425

Query: 1098 VATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENKNLFQE 919
            VATGVLGRGVDLL VRQVIVFDMPN IKEY+HQIGRASR+GE+G ++ FVNEEN+NLF +
Sbjct: 426  VATGVLGRGVDLLGVRQVIVFDMPNCIKEYVHQIGRASRMGEDGTSIVFVNEENRNLFPD 485

Query: 918  LVEVLKSSRAVVPRELANSRYTMASYSIGKRQKKRKY 808
            LVEVLKSS AV+PREL NSRY   S+ +GK Q+KRKY
Sbjct: 486  LVEVLKSSGAVIPRELVNSRYVKRSFPMGKGQRKRKY 522


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 514

 Score =  701 bits (1810), Expect = 0.0
 Identities = 356/523 (68%), Positives = 426/523 (81%)
 Frame = -3

Query: 2376 VKATSSSVSNDVEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTV 2197
            V    S  ++DV+ T +E    QREA+ GEP CV+CGRYGEYICDETDDD+CSLECKQ +
Sbjct: 3    VACAGSDGASDVKKTSRE----QREALQGEPKCVLCGRYGEYICDETDDDICSLECKQIL 58

Query: 2196 LSNLAKCWKPEKPAPPVRLPVTDECFYVRDGDKSGAQHLTSDQIALLRSKIEIRVKGDSI 2017
            L  + K        PP RL  TDECFYVR+   +G   LT+DQ  LLR  +EI VKG+ +
Sbjct: 59   LGGVGKSDISVGIPPPRRLAATDECFYVRE---NGTSSLTNDQTELLRRTLEIHVKGELV 115

Query: 2016 PPPILAFSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFL 1837
            P PIL+FSSCNLP+KL LNLEAAGY++PTPVQMQ+IP AL+GK+LL SA+TGSGKTAS+L
Sbjct: 116  PDPILSFSSCNLPQKLLLNLEAAGYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYL 175

Query: 1836 VPVVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAM 1657
            VP++S C ++R   H+  + P+AMVL PTRELC+Q+E+QAKLFG+GLPFKTALVVGG+AM
Sbjct: 176  VPIISSCASYRLQ-HSSDRKPLAMVLTPTRELCIQVEDQAKLFGKGLPFKTALVVGGDAM 234

Query: 1656 SGQIYRIQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXDCMLQRGFRDQVIQIFQ 1477
            +GQ+YRIQQGVELIVGTPGRLIDL TKHDI             DCMLQRGFRDQV+QIF 
Sbjct: 235  AGQLYRIQQGVELIVGTPGRLIDLLTKHDIELDNMIIFVIDEVDCMLQRGFRDQVMQIFW 294

Query: 1476 ALFKPQILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVESKKKKQKL 1297
            AL +PQ+L+YSAT++ EVEKMASSMAKD+  +SIG+PNRP ++VKQ+ IWVE K+KKQKL
Sbjct: 295  ALSQPQVLLYSATVTQEVEKMASSMAKDMALVSIGQPNRPSKAVKQLAIWVEPKQKKQKL 354

Query: 1296 FEIIMSQQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLM 1117
            F+I+MS+QHF PP VV+V S+LGA+LLS AITVTTG K+LSIHG+K MKERRE ++ FL+
Sbjct: 355  FDILMSKQHFMPPAVVYVGSRLGADLLSNAITVTTGWKSLSIHGEKSMKERREIMKSFLV 414

Query: 1116 GEVSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEEN 937
            GEV+VIVATGVLGRGVDL  VRQVI+FDMPNSIKEYIHQIGRASR+GE G+A+ FVNEEN
Sbjct: 415  GEVTVIVATGVLGRGVDLFGVRQVIIFDMPNSIKEYIHQIGRASRMGEGGIAIVFVNEEN 474

Query: 936  KNLFQELVEVLKSSRAVVPRELANSRYTMASYSIGKRQKKRKY 808
            KNLF E +EVLKSS AV+PRELANSR     YS+GK QKKRKY
Sbjct: 475  KNLFPEFIEVLKSSAAVIPRELANSR-----YSVGKGQKKRKY 512


>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max]
          Length = 528

 Score =  681 bits (1757), Expect = 0.0
 Identities = 344/521 (66%), Positives = 419/521 (80%), Gaps = 1/521 (0%)
 Frame = -3

Query: 2367 TSSSVSNDVEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLSN 2188
            T +   NDVED VK R  DQR A+ GEP C+ICGRYGEYICDETDDDVCSLECKQ +L  
Sbjct: 15   TDAEAPNDVEDDVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQALLCR 74

Query: 2187 LAKCWKPEKPAPPVRLPVTDECFYVRDGD-KSGAQHLTSDQIALLRSKIEIRVKGDSIPP 2011
            +AK   P    PP  +P  DECFYVRD D KSG   + SD    LR K++IRVKGD + P
Sbjct: 75   IAKSLSP----PPKTIPAADECFYVRDSDFKSGTVSMGSD----LRKKLDIRVKGDVVAP 126

Query: 2010 PILAFSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLVP 1831
             +L+FS+CNLP+KL  N+EAAGYE+PTPVQMQ+IPAALTGK++LV A+TGSGK+ASFL+P
Sbjct: 127  -VLSFSACNLPDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLVLADTGSGKSASFLIP 185

Query: 1830 VVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMSG 1651
            +VS C   R    +  K P+AMVL PTRELC+Q+EE AKL G+GLPFKTALVVGG+AM+G
Sbjct: 186  IVSRCVIHRRQYFSGKKKPLAMVLTPTRELCIQVEEHAKLLGKGLPFKTALVVGGDAMAG 245

Query: 1650 QIYRIQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXDCMLQRGFRDQVIQIFQAL 1471
            Q++RIQQGVELIVGTPGRL+DL  KH+I             DCMLQRGFRDQV+QI++AL
Sbjct: 246  QLHRIQQGVELIVGTPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIYRAL 305

Query: 1470 FKPQILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVESKKKKQKLFE 1291
             +PQ+LMYSAT+S ++EKM +++AK ++ +SIG+PN P ++VKQ+ IWVESK+KKQKLFE
Sbjct: 306  SQPQVLMYSATMSNDLEKMINTLAKGMVVMSIGEPNTPNKAVKQLAIWVESKQKKQKLFE 365

Query: 1290 IIMSQQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMGE 1111
            I+ S++HFKPPVVV+V S+LGA+LL+ AITV TGIK +SIHG+K MKERRET++ FL+GE
Sbjct: 366  ILASKKHFKPPVVVYVGSRLGADLLANAITVATGIKAVSIHGEKSMKERRETMQSFLVGE 425

Query: 1110 VSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENKN 931
            V V+VATGVLGRGVDLL VRQVIVFDMPN+IKEY+HQIGRASR+GEEG  + FVNEENKN
Sbjct: 426  VPVVVATGVLGRGVDLLGVRQVIVFDMPNNIKEYVHQIGRASRMGEEGQGIVFVNEENKN 485

Query: 930  LFQELVEVLKSSRAVVPRELANSRYTMASYSIGKRQKKRKY 808
            +F EL++VLKS  A VPRELANSRY    +S GK  KKRK+
Sbjct: 486  VFAELIDVLKSGGAAVPRELANSRYATRVFSGGKGSKKRKH 526


>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max]
          Length = 528

 Score =  677 bits (1748), Expect = 0.0
 Identities = 340/522 (65%), Positives = 419/522 (80%), Gaps = 1/522 (0%)
 Frame = -3

Query: 2370 ATSSSVSNDVEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLS 2191
            AT +   ND ED VK R  DQR A+ GEP C+ICGRYGEYICDETDDDVCSLECKQ +L 
Sbjct: 14   ATDTDAPNDAEDEVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQALLC 73

Query: 2190 NLAKCWKPEKPAPPVRLPVTDECFYVRDGD-KSGAQHLTSDQIALLRSKIEIRVKGDSIP 2014
             +AK   P    PP R+P  DECFYV+D D +SG   + SD    LR K++I VKGD + 
Sbjct: 74   RIAKSSSP----PPKRIPAADECFYVKDADYESGTASMASD----LRKKLDIHVKGDVVA 125

Query: 2013 PPILAFSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLV 1834
            P +L+FS+CNLP+KL  N+EAAGYE+PTPVQMQ+IPAALTGK++L+ A+TGSGK+ASFL+
Sbjct: 126  P-VLSFSACNLPDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLLLADTGSGKSASFLI 184

Query: 1833 PVVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMS 1654
            P+VS C   R    +  KNP+A+VL PTRELC+Q+EE AKL G+G+PFKTALVVGG+AM+
Sbjct: 185  PIVSRCAIHRRQYVSDKKNPLALVLTPTRELCMQVEEHAKLLGKGMPFKTALVVGGDAMA 244

Query: 1653 GQIYRIQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXDCMLQRGFRDQVIQIFQA 1474
            GQ++RIQQGVELIVGTPGRL+DL TKH+I             DCMLQRGFRDQV+QI++A
Sbjct: 245  GQLHRIQQGVELIVGTPGRLVDLLTKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIYRA 304

Query: 1473 LFKPQILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVESKKKKQKLF 1294
            L +PQ+LMYSAT+S ++EKM +++ K  + IS+G+PN P ++VKQ+ IWVESK+KKQKLF
Sbjct: 305  LSQPQVLMYSATMSNDLEKMINTLVKGTVVISVGEPNTPNKAVKQLAIWVESKEKKQKLF 364

Query: 1293 EIIMSQQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMG 1114
            EI+ S++HFKPPVVV+V S+LGA+LL+ AITV+TGIK +SIHG+K MKERRET++  L+G
Sbjct: 365  EILESKKHFKPPVVVYVGSRLGADLLANAITVSTGIKAVSIHGEKSMKERRETMQSLLVG 424

Query: 1113 EVSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENK 934
            EV V+VATGVLGRGVDLL VRQVIVFDMPN+IKEY+HQIGRASR+GEEG  + FVNEENK
Sbjct: 425  EVPVVVATGVLGRGVDLLGVRQVIVFDMPNNIKEYVHQIGRASRMGEEGQGIVFVNEENK 484

Query: 933  NLFQELVEVLKSSRAVVPRELANSRYTMASYSIGKRQKKRKY 808
            N+F EL+EVLKS  A VPRELANSRY    +S GK  KKRK+
Sbjct: 485  NIFAELIEVLKSGGAAVPRELANSRYATGVFSGGKGSKKRKH 526