BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006359
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633330.1| PREDICTED: mitochondrial import inner membra...   371   e-100
ref|XP_002264515.1| PREDICTED: mitochondrial import inner membra...   362   1e-97
gb|ACG39671.1| import inner membrane translocase subunit TIM50 [...   352   8e-95
ref|NP_001142162.1| uncharacterized protein LOC100274327 [Zea ma...   348   1e-93
ref|XP_002458533.1| hypothetical protein SORBIDRAFT_03g035300 [S...   344   3e-92

>ref|XP_003633330.1| PREDICTED: mitochondrial import inner membrane translocase subunit
            TIM50-like [Vitis vinifera] gi|296085020|emb|CBI28435.3|
            unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  371 bits (953), Expect = e-100
 Identities = 187/310 (60%), Positives = 236/310 (76%), Gaps = 4/310 (1%)
 Frame = -2

Query: 1184 PRSDGTTKMNSWNYLKYGAYATLAGLSGTVAYQTYAYSADEVDSITKDIRNSLKQKKNKD 1005
            P S+   K +S  +LK+  + TLAG +    Y +YAY+ DEVD  TK  R S K     +
Sbjct: 58   PPSEPVAKKSSSAFLKFAIFGTLAGATAAAGYASYAYTLDEVDEKTKAFRTSAKYTVGDN 117

Query: 1004 ASSLEKFQALLYPAAMIVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGLG 825
            ASSL+KFQALLY AAM VPAK I++YL+LRR IE +IR + EP S+KLLPDL P  +   
Sbjct: 118  ASSLDKFQALLYSAAMTVPAKAIELYLDLRRPIEEQIRGFAEPSSEKLLPDLHPLEQH-- 175

Query: 824  VMTLVVDLNETLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPIC 645
            + TLV+DLNETL+YSDWKRERGWRTFKRPGVDAFLE LAQFYEIVV+SDQQ  M+VDP+ 
Sbjct: 176  IFTLVLDLNETLLYSDWKRERGWRTFKRPGVDAFLEHLAQFYEIVVYSDQQS-MYVDPVL 234

Query: 644  ERLNQKGTITYRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQLDNCLEIK 465
            ERL+QKG I YRL RTAT+YQ+GKHY+DLSKLNRDP+K++YVSGHA+E+ LQ +NC+ IK
Sbjct: 235  ERLDQKGCIRYRLSRTATRYQDGKHYRDLSKLNRDPSKILYVSGHAIESCLQPENCVPIK 294

Query: 464  PWKLEEGDTALLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEF----HERQRKLVDEQ 297
            PWK+E  DT LLDL+PFLE++A  RP DIR VL SY+G D+ATEF     + QR++++++
Sbjct: 295  PWKVEADDTVLLDLIPFLEYVARHRPADIRPVLASYQGRDIATEFIARSKDHQRRMLEQR 354

Query: 296  RKTKKTIWSR 267
            +  +   W R
Sbjct: 355  QHGR--FWQR 362


>ref|XP_002264515.1| PREDICTED: mitochondrial import inner membrane translocase subunit
            TIM50 [Vitis vinifera] gi|296089900|emb|CBI39719.3|
            unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  362 bits (928), Expect = 1e-97
 Identities = 186/311 (59%), Positives = 232/311 (74%), Gaps = 4/311 (1%)
 Frame = -2

Query: 1187 PPRSDGTTKMNSWNYLKYGAYATLAGLSGTVAYQTYAYSADEVDSITKDIRNSLKQKKNK 1008
            PP +  + K  SWN+LK+G    L     T  Y +YAY+ DEVD  TK  R S K     
Sbjct: 67   PPPAPPSAK-KSWNFLKFGLIGALTVGVATAGYASYAYTLDEVDEKTKAFRASAKDSVED 125

Query: 1007 DASSLEKFQALLYPAAMIVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGL 828
            DAS+ +KF+AL Y +A+ VPAK ID+YL++RR IE ++  +TEP SDKLLPDL P  +  
Sbjct: 126  DASAFDKFKALAYTSAVTVPAKAIDLYLDMRRLIEEQVHGFTEPLSDKLLPDLHPMEQH- 184

Query: 827  GVMTLVVDLNETLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPI 648
             V+TLV+DLNETLIYSDWKR+RGWRTFKRPGVDAFLE LAQFYEIVV+SDQ   M+VDP+
Sbjct: 185  -VLTLVLDLNETLIYSDWKRDRGWRTFKRPGVDAFLEHLAQFYEIVVYSDQLS-MYVDPV 242

Query: 647  CERLNQKGTITYRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQLDNCLEI 468
             ERL++K  I +RL R AT+YQ+GKHY+DLSKLNRDPAK++YVSGHALET+LQ +NC++I
Sbjct: 243  VERLDKKQCIRHRLSRAATRYQDGKHYRDLSKLNRDPAKILYVSGHALETSLQPENCVQI 302

Query: 467  KPWKLEEGDTALLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHER----QRKLVDE 300
            KPWKLEE DT LLDL+PFLE++A  RP DIR VL SY+G D+A EF ER    QR++  +
Sbjct: 303  KPWKLEEDDTQLLDLIPFLEYVARNRPADIRPVLASYQGHDIAKEFIERSKEYQRRM--Q 360

Query: 299  QRKTKKTIWSR 267
            ++K     W R
Sbjct: 361  EQKQHGRFWRR 371


>gb|ACG39671.1| import inner membrane translocase subunit TIM50 [Zea mays]
          Length = 352

 Score =  352 bits (904), Expect = 8e-95
 Identities = 176/310 (56%), Positives = 229/310 (73%), Gaps = 3/310 (0%)
 Frame = -2

Query: 1187 PPRSDGTTKMNSWNYLKYGAYATLAGLSGTVAYQTYAYSADEVDSITKDIRNSLKQKKNK 1008
            P      T  N W  LK+ A+A ++   G   Y +YAYS +EVD +T+++R   KQ   +
Sbjct: 47   PSSQPPQTARNPWGALKFAAFAAVSAAVGGTGYVSYAYSLEEVDQMTRELRKKSKQPIPE 106

Query: 1007 DASSLEKFQALLYPAAMIVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGL 828
            DAS  E+FQA+ Y AAM VP   I++YL++R  IE +IR ++EP SDKLLPDLAP+ +  
Sbjct: 107  DASGFERFQAMAYSAAMKVPVAAIEVYLDVRSQIEDQIRGFSEPVSDKLLPDLAPQEQH- 165

Query: 827  GVMTLVVDLNETLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPI 648
             V+TLV+DLNETL+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ   M+VDP+
Sbjct: 166  -VLTLVLDLNETLVYSDWKRERGWRTFKRPGVDAFLEHLGRFYEIVVYSDQLS-MYVDPV 223

Query: 647  CERLNQKGTITYRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQLDNCLEI 468
             +RL+ KG I +RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQ +N +EI
Sbjct: 224  VDRLDPKGNIRHRLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEI 283

Query: 467  KPWKLEEGDTALLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQ 297
            KPWKLE  DT LLDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ
Sbjct: 284  KPWKLENDDTQLLDLIPFLEYVAMARPSDIRAVLASYQSGDIAAEFIERSKEHQRRMQEQ 343

Query: 296  RKTKKTIWSR 267
            +K+ + IW R
Sbjct: 344  KKSGR-IWRR 352


>ref|NP_001142162.1| uncharacterized protein LOC100274327 [Zea mays]
            gi|194707412|gb|ACF87790.1| unknown [Zea mays]
            gi|413952358|gb|AFW85007.1| import inner membrane
            translocase subunit TIM50 [Zea mays]
          Length = 359

 Score =  348 bits (894), Expect = 1e-93
 Identities = 174/310 (56%), Positives = 228/310 (73%), Gaps = 3/310 (0%)
 Frame = -2

Query: 1187 PPRSDGTTKMNSWNYLKYGAYATLAGLSGTVAYQTYAYSADEVDSITKDIRNSLKQKKNK 1008
            P      T    W  LK+ A+A ++   G   Y +YAYS +EVD +T+++R   KQ   +
Sbjct: 54   PSSQPPQTARKPWGALKFAAFAAVSTAVGGTGYVSYAYSLEEVDQMTRELRKKSKQPIPE 113

Query: 1007 DASSLEKFQALLYPAAMIVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGL 828
            DAS  E+FQA+ Y AAM VP   I++Y+++R  IE +IR ++EP SDKLLPDLAP+ +  
Sbjct: 114  DASGFERFQAMAYSAAMKVPVAAIEVYMDVRSQIEDQIRGFSEPVSDKLLPDLAPQEQH- 172

Query: 827  GVMTLVVDLNETLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPI 648
             V+TLV+DLNETL+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ   M+VDP+
Sbjct: 173  -VLTLVLDLNETLVYSDWKRERGWRTFKRPGVDAFLEHLGRFYEIVVYSDQLS-MYVDPV 230

Query: 647  CERLNQKGTITYRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQLDNCLEI 468
             +RL+ KG I +RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQ +N +EI
Sbjct: 231  VDRLDPKGNIRHRLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEI 290

Query: 467  KPWKLEEGDTALLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQ 297
            KPWKLE  DT LLDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ
Sbjct: 291  KPWKLENDDTQLLDLIPFLEYVAMARPSDIRAVLASYQSGDIAAEFIERSKEHQRRMQEQ 350

Query: 296  RKTKKTIWSR 267
            +K+ + IW R
Sbjct: 351  KKSGR-IWRR 359


>ref|XP_002458533.1| hypothetical protein SORBIDRAFT_03g035300 [Sorghum bicolor]
            gi|241930508|gb|EES03653.1| hypothetical protein
            SORBIDRAFT_03g035300 [Sorghum bicolor]
          Length = 360

 Score =  344 bits (882), Expect = 3e-92
 Identities = 172/298 (57%), Positives = 223/298 (74%), Gaps = 3/298 (1%)
 Frame = -2

Query: 1151 WNYLKYGAYATLAGLSGTVAYQTYAYSADEVDSITKDIRNSLKQKKNKDASSLEKFQALL 972
            W  LK+ A   ++   G  AY +YAYS DEVD +T+++R   KQ   +DAS  E+FQA+ 
Sbjct: 67   WGALKFAALTAVSAAVGGTAYVSYAYSLDEVDQMTRELRKKSKQPIPEDASGFERFQAMA 126

Query: 971  YPAAMIVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGLGVMTLVVDLNET 792
            Y +AM VP   I+ YL++R  IE +IR ++EP SDKLLPDL P+ +   V+TLV+DLNET
Sbjct: 127  YSSAMKVPVAAIEAYLDVRSQIEDQIRGFSEPVSDKLLPDLLPQEQH--VLTLVLDLNET 184

Query: 791  LIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPICERLNQKGTITY 612
            L+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ   M+VDP+ +RL+ KG I +
Sbjct: 185  LVYSDWKRERGWRTFKRPGVDAFLEHLGKFYEIVVYSDQLS-MYVDPVVDRLDPKGNIRH 243

Query: 611  RLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQLDNCLEIKPWKLEEGDTAL 432
            RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQ +N +EIKPWKLE  DT L
Sbjct: 244  RLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEIKPWKLESDDTQL 303

Query: 431  LDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQRKTKKTIWSR 267
            LDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ+K+ + IW R
Sbjct: 304  LDLIPFLEYVAMVRPSDIRSVLASYQSGDIAAEFIERSKEHQRRMQEQKKSGR-IWRR 360