BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006353
         (1727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   319   e-108
ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   318   e-107
ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   307   e-107
ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   314   e-107
ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   317   e-107

>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
            [Vitis vinifera]
          Length = 383

 Score =  319 bits (818), Expect(2) = e-108
 Identities = 145/199 (72%), Positives = 159/199 (79%)
 Frame = +2

Query: 809  SESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIXXXXXXXXXXXXXX 988
            S SVAKHLESANTMFSFIWWIIGFYWVSAGG  L RDSPQLYWLCI              
Sbjct: 185  STSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCV 244

Query: 989  XXXXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKIGDFEKVNGEAQGPF 1168
                 IGIAVCCCLPCIIAILYAVA+QEGA+ EDI+QL ++KFRK+GD EK++G+ QG  
Sbjct: 245  ALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGAC 304

Query: 1169 GGIMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHFHCACIDKWLYINAT 1348
            GGIMTEC TD P EHVL  E+AECCICLSAYDDG ELRELPC HHFHC C+DKWLYINAT
Sbjct: 305  GGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINAT 364

Query: 1349 CPLCKYNIIKSGNGSREEI 1405
            CPLCKYNI+KS +  REE+
Sbjct: 365  CPLCKYNILKSSSNGREEV 383



 Score =  100 bits (248), Expect(2) = e-108
 Identities = 55/114 (48%), Positives = 66/114 (57%)
 Frame = +3

Query: 357 IMREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMP 536
           +MREPSMLV            SDWAYSKPVV LD+IWN              R E+P MP
Sbjct: 58  MMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMP 117

Query: 537 LRLWILGYALQCVLHMVFVCMEYRRRHPPNGPLVQQNLGNDIETGSSTSSIEGD 698
           LR WI+GYALQC+LH+V V +EYRRR    G    ++ G     GS +SS +GD
Sbjct: 118 LRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIG-SGGSYSSSPQGD 170


>ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
            [Vitis vinifera]
          Length = 392

 Score =  318 bits (815), Expect(2) = e-107
 Identities = 144/197 (73%), Positives = 158/197 (80%)
 Frame = +2

Query: 815  SVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIXXXXXXXXXXXXXXXX 994
            SVAKHLESANTMFSFIWWIIGFYWVSAGG  L RDSPQLYWLCI                
Sbjct: 196  SVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVAL 255

Query: 995  XXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKIGDFEKVNGEAQGPFGG 1174
               IGIAVCCCLPCIIAILYAVA+QEGA+ EDI+QL ++KFRK+GD EK++G+ QG  GG
Sbjct: 256  ACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGG 315

Query: 1175 IMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHFHCACIDKWLYINATCP 1354
            IMTEC TD P EHVL  E+AECCICLSAYDDG ELRELPC HHFHC C+DKWLYINATCP
Sbjct: 316  IMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCP 375

Query: 1355 LCKYNIIKSGNGSREEI 1405
            LCKYNI+KS +  REE+
Sbjct: 376  LCKYNILKSSSNGREEV 392



 Score =  100 bits (248), Expect(2) = e-107
 Identities = 55/114 (48%), Positives = 66/114 (57%)
 Frame = +3

Query: 357 IMREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMP 536
           +MREPSMLV            SDWAYSKPVV LD+IWN              R E+P MP
Sbjct: 58  MMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMP 117

Query: 537 LRLWILGYALQCVLHMVFVCMEYRRRHPPNGPLVQQNLGNDIETGSSTSSIEGD 698
           LR WI+GYALQC+LH+V V +EYRRR    G    ++ G     GS +SS +GD
Sbjct: 118 LRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIG-SGGSYSSSPQGD 170


>ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 387

 Score =  307 bits (786), Expect(2) = e-107
 Identities = 140/199 (70%), Positives = 155/199 (77%)
 Frame = +2

Query: 809  SESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIXXXXXXXXXXXXXX 988
            S SVAKHLESANTMFSF+WWIIGFYWVSAGG  L +DSPQLYWLCI              
Sbjct: 189  STSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVFFVVFCV 248

Query: 989  XXXXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKIGDFEKVNGEAQGPF 1168
                 IGIAVCCCLPCIIA+LYAV +QEGA+ EDI QL K+KFR+I   EK+ G  QGP 
Sbjct: 249  ALACIIGIAVCCCLPCIIALLYAVTDQEGASKEDIEQLSKFKFRRIESNEKLTGTIQGPV 308

Query: 1169 GGIMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHFHCACIDKWLYINAT 1348
            GGIMTEC  D+PIEH L  E+AECCICLS+YDDG ELRELPC HHFHC C+DKWLYINAT
Sbjct: 309  GGIMTECQADSPIEHALAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINAT 368

Query: 1349 CPLCKYNIIKSGNGSREEI 1405
            CPLCKYNI+KS N S+EE+
Sbjct: 369  CPLCKYNILKSSNLSQEEV 387



 Score =  110 bits (274), Expect(2) = e-107
 Identities = 70/181 (38%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
 Frame = +3

Query: 180 SSTNDIVDSTPXXXXXXXXXXXXXSPAGNQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 359
           SS+ DIVDSTP             + AG+ D                            +
Sbjct: 6   SSSEDIVDSTPLLA----------NSAGSSDDLTSGRRFARRQRLRQAAQFLRQASGRRM 55

Query: 360 MREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMPL 539
           MREPSMLV            SDWAYSKPVV LDI+WN               +E P MPL
Sbjct: 56  MREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVLSASEAPGMPL 115

Query: 540 RLWILGYALQCVLHMVFVCMEYRRR---HPPNGPLVQQNLGNDIETGSSTSSIEGDGRDG 710
           RLWI+GYA+QCVLHMVFVC+EYRRR    P     VQ  +      GSS+ ++    R+G
Sbjct: 116 RLWIVGYAMQCVLHMVFVCVEYRRRRRQQPAAASSVQDRV------GSSSGNLSVSSREG 169

Query: 711 A 713
           +
Sbjct: 170 S 170


>ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
            [Vitis vinifera]
          Length = 382

 Score =  314 bits (804), Expect(2) = e-107
 Identities = 144/193 (74%), Positives = 157/193 (81%)
 Frame = +2

Query: 815  SVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIXXXXXXXXXXXXXXXX 994
            SVAKHLESANTMFSFIWWIIGFYWVSAGG DLTRDSPQLYWLCI                
Sbjct: 185  SVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAV 244

Query: 995  XXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKIGDFEKVNGEAQGPFGG 1174
               IGIAVCCCLPCIIAILY VA+QEGAT E+I +LPKYKFR+IG+ EK+NGE Q  FGG
Sbjct: 245  ACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGG 304

Query: 1175 IMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHFHCACIDKWLYINATCP 1354
            IMTECDTDTP+EHV+  E+AECCICLSAY+D  ELRELPCRH FHC CIDKWLYINATCP
Sbjct: 305  IMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCP 364

Query: 1355 LCKYNIIKSGNGS 1393
            LCK NI+K+ + S
Sbjct: 365  LCKLNILKNASQS 377



 Score =  103 bits (256), Expect(2) = e-107
 Identities = 60/131 (45%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
 Frame = +3

Query: 357 IMREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMP 536
           IMREPSM V            SDWAYSKP+V LDI+WN              R+E P  P
Sbjct: 53  IMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTP 112

Query: 537 LRLWILGYALQCVLHMVFVCMEY--RRRHPPNGPLVQQNLGNDIETGSSTSSIEGDGRDG 710
           LRLWI+GY LQCVLHMV VC+EY  RRR   +G L +          SS+ S EGD  D 
Sbjct: 113 LRLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDY 172

Query: 711 ADFLGERHEGE 743
              +  R E E
Sbjct: 173 RVEVRNRDEDE 183


>ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
            [Vitis vinifera]
          Length = 372

 Score =  317 bits (812), Expect(2) = e-107
 Identities = 143/197 (72%), Positives = 158/197 (80%)
 Frame = +2

Query: 815  SVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIXXXXXXXXXXXXXXXX 994
            +VAKHLESANTMFSFIWWIIGFYWVSAGG  L RDSPQLYWLCI                
Sbjct: 176  TVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVAL 235

Query: 995  XXXIGIAVCCCLPCIIAILYAVAEQEGATTEDINQLPKYKFRKIGDFEKVNGEAQGPFGG 1174
               IGIAVCCCLPCIIAILYAVA+QEGA+ EDI+QL ++KFRK+GD EK++G+ QG  GG
Sbjct: 236  ACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGG 295

Query: 1175 IMTECDTDTPIEHVLQMENAECCICLSAYDDGAELRELPCRHHFHCACIDKWLYINATCP 1354
            IMTEC TD P EHVL  E+AECCICLSAYDDG ELRELPC HHFHC C+DKWLYINATCP
Sbjct: 296  IMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCP 355

Query: 1355 LCKYNIIKSGNGSREEI 1405
            LCKYNI+KS +  REE+
Sbjct: 356  LCKYNILKSSSNGREEV 372



 Score =  100 bits (248), Expect(2) = e-107
 Identities = 55/114 (48%), Positives = 66/114 (57%)
 Frame = +3

Query: 357 IMREPSMLVXXXXXXXXXXXXSDWAYSKPVVFLDIIWNXXXXXXXXXXXXXXRNENPIMP 536
           +MREPSMLV            SDWAYSKPVV LD+IWN              R E+P MP
Sbjct: 58  MMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMP 117

Query: 537 LRLWILGYALQCVLHMVFVCMEYRRRHPPNGPLVQQNLGNDIETGSSTSSIEGD 698
           LR WI+GYALQC+LH+V V +EYRRR    G    ++ G     GS +SS +GD
Sbjct: 118 LRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIG-SGGSYSSSPQGD 170