BLASTX nr result

ID: Coptis24_contig00006351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006351
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK04309.1| predicted protein [Hordeum vulgare subsp. vulgare]    339   5e-91
tpg|DAA36423.1| TPA: putative argonaute family protein [Zea mays]     339   7e-91
tpg|DAA36422.1| TPA: putative argonaute family protein [Zea mays]     339   7e-91
ref|XP_003580340.1| PREDICTED: protein argonaute 1B-like [Brachy...   339   7e-91
dbj|BAJ99496.1| predicted protein [Hordeum vulgare subsp. vulgare]    339   7e-91

>dbj|BAK04309.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1216

 Score =  339 bits (870), Expect = 5e-91
 Identities = 184/293 (62%), Positives = 212/293 (72%), Gaps = 22/293 (7%)
 Frame = +3

Query: 3    YGEVKRICETELGLVSQCLLAGTVQKMHPQTLANIVLKINVKVGGVNTVIKDEIDK---- 170
            YG++KRICETELGLVSQC L   V KM  Q LAN+ LKINVKVGG NTV+ D + +    
Sbjct: 858  YGDLKRICETELGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALARRIRL 917

Query: 171  VTDIRTIIFGADVTHPNPGDDSSPSIAAVVASQNWPHVTNYVPIFSTQ--QKEIILDLRR 344
            VTD  TIIFGADVTHP+PG+DSSPSIAAVVASQ+WP +T Y  + S Q  ++E+I DL +
Sbjct: 918  VTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFK 977

Query: 345  -------------MIREHLRSFVENNKQMKPERIIFYRDGVSEGQFSQVRKYELTAIEEA 485
                         MI+E L SF     Q KP+RIIFYRDGVSEGQF QV  +EL AI +A
Sbjct: 978  VWQDPQRGTVTGGMIKELLISFKRATGQ-KPQRIIFYRDGVSEGQFYQVLLFELDAIRKA 1036

Query: 486  WLDEFKKFDVPVPPITFVVVQKRHHTKLFPANHND---ADKSGNVRPGTVVDSDICHPRD 656
                   +    PP+TFVVVQKRHHT+LF  NHND    D+SGN+ PGTVVDS ICHP +
Sbjct: 1037 CASLEPNYQ---PPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTE 1093

Query: 657  FDFYLCSHTGIQGTSRPAHYHVLRDDNEFTPDQLYTLTNGLCYIYARCTRSVS 815
            FDFYLCSH GIQGTSRPAHYHVL D+N+FT D+L TLTN LCY YARCTRSVS
Sbjct: 1094 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVS 1146


>tpg|DAA36423.1| TPA: putative argonaute family protein [Zea mays]
          Length = 452

 Score =  339 bits (869), Expect = 7e-91
 Identities = 184/293 (62%), Positives = 212/293 (72%), Gaps = 22/293 (7%)
 Frame = +3

Query: 3   YGEVKRICETELGLVSQCLLAGTVQKMHPQTLANIVLKINVKVGGVNTVIKDEIDK---- 170
           YG++KRICET+LGLVSQC L   V KM  Q LAN+ LKINVKVGG NTV+ D + +    
Sbjct: 95  YGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPL 154

Query: 171 VTDIRTIIFGADVTHPNPGDDSSPSIAAVVASQNWPHVTNYVPIFSTQ--QKEIILDLRR 344
           V+D  TIIFGADVTHP+PG+DSSPSIAAVVASQ+WP VT Y  + S Q  ++E+I DL +
Sbjct: 155 VSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFK 214

Query: 345 -------------MIREHLRSFVENNKQMKPERIIFYRDGVSEGQFSQVRKYELTAIEEA 485
                        MI+E L SF     Q KP+RIIFYRDGVSEGQF QV  YEL AI +A
Sbjct: 215 VWQDPQRRTVTGGMIKELLISFKRATGQ-KPQRIIFYRDGVSEGQFYQVLLYELDAIRKA 273

Query: 486 WLDEFKKFDVPVPPITFVVVQKRHHTKLFPANHND---ADKSGNVRPGTVVDSDICHPRD 656
                  +    PP+TFVVVQKRHHT+LF  NHND    D+SGN+ PGTVVDS ICHP +
Sbjct: 274 CASLEPNYQ---PPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTE 330

Query: 657 FDFYLCSHTGIQGTSRPAHYHVLRDDNEFTPDQLYTLTNGLCYIYARCTRSVS 815
           FDFYLCSH GIQGTSRPAHYHVL D+N+FT D+L TLTN LCY YARCTRSVS
Sbjct: 331 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVS 383


>tpg|DAA36422.1| TPA: putative argonaute family protein [Zea mays]
          Length = 1078

 Score =  339 bits (869), Expect = 7e-91
 Identities = 184/293 (62%), Positives = 212/293 (72%), Gaps = 22/293 (7%)
 Frame = +3

Query: 3    YGEVKRICETELGLVSQCLLAGTVQKMHPQTLANIVLKINVKVGGVNTVIKDEIDK---- 170
            YG++KRICET+LGLVSQC L   V KM  Q LAN+ LKINVKVGG NTV+ D + +    
Sbjct: 721  YGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPL 780

Query: 171  VTDIRTIIFGADVTHPNPGDDSSPSIAAVVASQNWPHVTNYVPIFSTQ--QKEIILDLRR 344
            V+D  TIIFGADVTHP+PG+DSSPSIAAVVASQ+WP VT Y  + S Q  ++E+I DL +
Sbjct: 781  VSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFK 840

Query: 345  -------------MIREHLRSFVENNKQMKPERIIFYRDGVSEGQFSQVRKYELTAIEEA 485
                         MI+E L SF     Q KP+RIIFYRDGVSEGQF QV  YEL AI +A
Sbjct: 841  VWQDPQRRTVTGGMIKELLISFKRATGQ-KPQRIIFYRDGVSEGQFYQVLLYELDAIRKA 899

Query: 486  WLDEFKKFDVPVPPITFVVVQKRHHTKLFPANHND---ADKSGNVRPGTVVDSDICHPRD 656
                   +    PP+TFVVVQKRHHT+LF  NHND    D+SGN+ PGTVVDS ICHP +
Sbjct: 900  CASLEPNYQ---PPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTE 956

Query: 657  FDFYLCSHTGIQGTSRPAHYHVLRDDNEFTPDQLYTLTNGLCYIYARCTRSVS 815
            FDFYLCSH GIQGTSRPAHYHVL D+N+FT D+L TLTN LCY YARCTRSVS
Sbjct: 957  FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVS 1009


>ref|XP_003580340.1| PREDICTED: protein argonaute 1B-like [Brachypodium distachyon]
          Length = 1094

 Score =  339 bits (869), Expect = 7e-91
 Identities = 184/293 (62%), Positives = 212/293 (72%), Gaps = 22/293 (7%)
 Frame = +3

Query: 3    YGEVKRICETELGLVSQCLLAGTVQKMHPQTLANIVLKINVKVGGVNTVIKDEIDK---- 170
            YG++KRICET+LGLVSQC L   V KM  Q LAN+ LKINVKVGG NTV+ D + +    
Sbjct: 737  YGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPL 796

Query: 171  VTDIRTIIFGADVTHPNPGDDSSPSIAAVVASQNWPHVTNYVPIFSTQ--QKEIILDLRR 344
            V+D  TIIFGADVTHP+PG+DSSPSIAAVVASQ+WP VT Y  + S Q  ++E+I DL +
Sbjct: 797  VSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFK 856

Query: 345  -------------MIREHLRSFVENNKQMKPERIIFYRDGVSEGQFSQVRKYELTAIEEA 485
                         MI+E L SF     Q KP+RIIFYRDGVSEGQF QV  YEL AI +A
Sbjct: 857  VWQDPQRGTVTGGMIKELLISFKRATGQ-KPQRIIFYRDGVSEGQFYQVLLYELDAIRKA 915

Query: 486  WLDEFKKFDVPVPPITFVVVQKRHHTKLFPANHND---ADKSGNVRPGTVVDSDICHPRD 656
                   +    PP+TFVVVQKRHHT+LF  NHND    D+SGN+ PGTVVDS ICHP +
Sbjct: 916  CASLEPNYQ---PPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTE 972

Query: 657  FDFYLCSHTGIQGTSRPAHYHVLRDDNEFTPDQLYTLTNGLCYIYARCTRSVS 815
            FDFYLCSH GIQGTSRPAHYHVL D+N+FT D+L TLTN LCY YARCTRSVS
Sbjct: 973  FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVS 1025


>dbj|BAJ99496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 810

 Score =  339 bits (869), Expect = 7e-91
 Identities = 184/293 (62%), Positives = 212/293 (72%), Gaps = 22/293 (7%)
 Frame = +3

Query: 3    YGEVKRICETELGLVSQCLLAGTVQKMHPQTLANIVLKINVKVGGVNTVIKDEIDK---- 170
            YG++KRICET+LGLVSQC L   V KM  Q LAN+ LKINVKVGG NTV+ D + +    
Sbjct: 454  YGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPL 513

Query: 171  VTDIRTIIFGADVTHPNPGDDSSPSIAAVVASQNWPHVTNYVPIFSTQ--QKEIILDLRR 344
            V+D  TIIFGADVTHP+PG+DSSPSIAAVVASQ+WP VT Y  + S Q  ++E+I DL +
Sbjct: 514  VSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFK 573

Query: 345  -------------MIREHLRSFVENNKQMKPERIIFYRDGVSEGQFSQVRKYELTAIEEA 485
                         MI+E L SF     Q KP+RIIFYRDGVSEGQF QV  YEL AI +A
Sbjct: 574  VWQDPQRGTVTGGMIKELLISFKRATGQ-KPQRIIFYRDGVSEGQFYQVLLYELDAIRKA 632

Query: 486  WLDEFKKFDVPVPPITFVVVQKRHHTKLFPANHND---ADKSGNVRPGTVVDSDICHPRD 656
                   +    PP+TFVVVQKRHHT+LF  NHND    D+SGN+ PGTVVDS ICHP +
Sbjct: 633  CASLEPNYQ---PPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTE 689

Query: 657  FDFYLCSHTGIQGTSRPAHYHVLRDDNEFTPDQLYTLTNGLCYIYARCTRSVS 815
            FDFYLCSH GIQGTSRPAHYHVL D+N+FT D+L TLTN LCY YARCTRSVS
Sbjct: 690  FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVS 742