BLASTX nr result

ID: Coptis24_contig00006342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006342
         (1439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282899.1| PREDICTED: NAC domain-containing protein 68 ...    97   1e-17
ref|XP_002327163.1| NAC domain protein, IPR003441 [Populus trich...    92   4e-16
ref|XP_003549394.1| PREDICTED: NAC domain-containing protein 69-...    81   6e-13
emb|CAN83344.1| hypothetical protein VITISV_042275 [Vitis vinifera]    75   6e-11
ref|XP_002510187.1| transcription factor, putative [Ricinus comm...    72   3e-10

>ref|XP_002282899.1| PREDICTED: NAC domain-containing protein 68 [Vitis vinifera]
          Length = 302

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 92/306 (30%), Positives = 129/306 (42%), Gaps = 28/306 (9%)
 Frame = -2

Query: 1354 MGEEEDPKNKP--LPPGFRFNPTEQQLFSFYLAXXXXXXXXXXXXXXT---DVIPEIDSI 1190
            MG++ + +  P  LPPG RF+P+E+QL  +YL                   + I E+D +
Sbjct: 1    MGDQNNSQTTPFQLPPGCRFHPSEEQLIRYYLTGKNTTGALSSSDHNVFGFNAIGELD-L 59

Query: 1189 YNYDPYDLPEIDSFPXXXXXXXXXXXYFTLXXXXXXXXXXXXG-FWKRKCRXXXXXXXXX 1013
            Y Y+P++LP+   F             +T             G FWKR  R         
Sbjct: 60   YGYEPFNLPDTACFGFGHGGRRRHWYCYTARVLKEKGRRKAGGGFWKRTGRVRDVVVGKD 119

Query: 1012 XXXXXS---FVFYKRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMK 842
                     F FY  +S K     RTDW+M EYALVDH    FVLCRV++KS S N    
Sbjct: 120  KVTLGRRTTFAFYLGNSSKS--AVRTDWVMFEYALVDHLKASFVLCRVFVKSPSGNNASD 177

Query: 841  VGLNSHTEDSFAAKNN---NVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSLGVVRSDQ 671
              ++S  E+S +A  +     DG + S I E  V  DN V  +         L     DQ
Sbjct: 178  HVISSCGEESVSAVRHVGIQHDGTATSDIVEANVHGDNSVDTKNEIPKISARLLSELDDQ 237

Query: 670  LIGNSNRLIVSGYTF-------DDVDMDELKTNTI---------FLEGDYLELDDLVGPL 539
            ++  ++R  V+ + F       + V      T  +          LE D++ELDDLV PL
Sbjct: 238  VM--THRGFVADFNFPLGIQAHNPVMSTSGSTRFVDGTTQGLMSILEEDFIELDDLVYPL 295

Query: 538  LAFGSS 521
            L    S
Sbjct: 296  LGIDQS 301


>ref|XP_002327163.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222835478|gb|EEE73913.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 288

 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 86/281 (30%), Positives = 122/281 (43%), Gaps = 23/281 (8%)
 Frame = -2

Query: 1321 LPPGFRFNPTEQQLFSFYLAXXXXXXXXXXXXXXT-DVIPEIDSIYNYDPYDLPEIDSFP 1145
            LPPG RF P+++QLF +YL                 D+I E+D +Y+Y+P+DLPE   + 
Sbjct: 15   LPPGCRFYPSDEQLFCYYLKNKNRTVPNDTDDVNGYDLIKELD-LYDYEPFDLPENACYA 73

Query: 1144 XXXXXXXXXXXYFTLXXXXXXXXXXXXGFWKRKCRXXXXXXXXXXXXXXS----FVFYKR 977
                        +T             GFW+   R                   FVFY  
Sbjct: 74   YGYKARKRHWYCYTKEQVGVPRRKAKGGFWRISGRVRDVVVGLGGEAVMGTRTRFVFYMG 133

Query: 976  DSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNSHTEDSFAAKN 797
            +S K     RT W++ EYALVDH    FVLCRV++KS   N + +  ++S  E+S +A  
Sbjct: 134  NSVKS--AVRTGWVLYEYALVDHAKASFVLCRVFVKSRGGNSISENVVSSCAEESVSALP 191

Query: 796  N---------NVDGASASGIGEV------VVRQ-DNQVAVRPFSDNGVGSLGVVRSDQLI 665
            +           D A A G  ++      + R+ D+QV  RP S   + S       Q  
Sbjct: 192  SIGAQHDEFLTPDIAEAKGPNDLSRYSARLDRELDDQVTTRPLS---ISSFQFPSDSQC- 247

Query: 664  GNSNRLIVSGYTFDD--VDMDELKTNTIFLEGDYLELDDLV 548
             N      SG T  +  VD +  +     LEGD++ELDDLV
Sbjct: 248  -NEAVRRTSGPTGGNMYVDAETSQQLQSILEGDFIELDDLV 287


>ref|XP_003549394.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]
          Length = 302

 Score = 81.3 bits (199), Expect = 6e-13
 Identities = 67/225 (29%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
 Frame = -2

Query: 1342 EDPKNKPLPPGFRFNPTEQQLFSFYLAXXXXXXXXXXXXXXTDVIPEIDSIYNYDPYDLP 1163
            ED  +  LPPG+RF P+E+ L  +YL                D+I E+D +Y++DP++LP
Sbjct: 2    EDHAHAALPPGYRFYPSEEVLVGYYLTKKNENREEGFYGS--DLIRELD-LYDHDPFELP 58

Query: 1162 EIDS-FPXXXXXXXXXXXYFTLXXXXXXXXXXXXGFWKRKCRXXXXXXXXXXXXXXS--- 995
            +  + F             +              GFW RK +                  
Sbjct: 59   DAAACFSYGYKGRKKHWFCYAKETKRRNRRKVKSGFWLRKGKVRDISDHNGDDVVLGTRT 118

Query: 994  -FVFYKRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNSHTE 818
             FVFY  +S K     RTDW++ EYALVD  +  FVLCRV  K    N   ++GL+   E
Sbjct: 119  RFVFYVGNSLKNAA--RTDWILYEYALVDRFLASFVLCRVVNKPPHKNSPSEIGLSCCAE 176

Query: 817  DSFAAKNNNV----DGASASGIGEV------VVRQDNQVAVRPFS 713
            +S  A   +V    DG + S + E        V ++N++A  P S
Sbjct: 177  ESVVAVVRHVGVQCDGCAESDVVEAKVCDEGFVNRENEIAENPIS 221


>emb|CAN83344.1| hypothetical protein VITISV_042275 [Vitis vinifera]
          Length = 382

 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 84/297 (28%), Positives = 119/297 (40%), Gaps = 18/297 (6%)
 Frame = -2

Query: 1357 LMGEEEDPKNKP--LPPGFRFNPTEQQLFSFYLA---XXXXXXXXXXXXXXTDVIPEIDS 1193
            LMG++ + +  P  LPPG RF+P+E+QL  +YL                   + I E+D 
Sbjct: 100  LMGDQNNSQTTPFQLPPGCRFHPSEEQLIRYYLTGKNTTGALSSSDHNVFGFNAIGELD- 158

Query: 1192 IYNYDPYDLPEIDSFPXXXXXXXXXXXYFTL-XXXXXXXXXXXXGFWKRKCR---XXXXX 1025
            +Y Y+P++LP+   F             +T              GFWKR  R        
Sbjct: 159  LYGYEPFNLPDTACFGFGHGGRRRHWYCYTARVLKEKGRRKAGGGFWKRTGRVRDVVVGK 218

Query: 1024 XXXXXXXXXSFVFYKRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRV-------YLKS 866
                     +F FY  +S K     RTDW+M EYALVDH    F    V        L++
Sbjct: 219  DKVTLGRRTTFAFYLGNSSKS--AVRTDWVMFEYALVDHLKLLFCTSPVANFGMHYSLQT 276

Query: 865  CSDNKVMK--VGLNSHTEDSFAAKNNNVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSL 692
              D       V  N H ++S   K N +   SA  + E+    D  +  R F  +    L
Sbjct: 277  LHDGTATSDIVEANVHGDNSVDTK-NXIPKISARLLSEL---DDQVMTHRGFVADFNFPL 332

Query: 691  GVVRSDQLIGNSNRLIVSGYTFDDVDMDELKTNTIFLEGDYLELDDLVGPLLAFGSS 521
            G+   + ++  S         F D     L +    LE D++ELDDLV PLL    S
Sbjct: 333  GIQAHNPVMSTS-----GSTRFVDGTTQGLMS---ILEEDFIELDDLVYPLLGIDQS 381


>ref|XP_002510187.1| transcription factor, putative [Ricinus communis]
            gi|223550888|gb|EEF52374.1| transcription factor,
            putative [Ricinus communis]
          Length = 276

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 73/275 (26%), Positives = 113/275 (41%), Gaps = 19/275 (6%)
 Frame = -2

Query: 1315 PGFRFNPTEQQLFSFYLAXXXXXXXXXXXXXXT---DVIPEIDSIYNYDPYDLPEIDSFP 1145
            PG RF P+++QL  +YL                   D+I E+D +Y Y+P +LPE   + 
Sbjct: 6    PGCRFYPSDEQLLCYYLTSKTDEVGDGNNDKKINGYDLIKELD-LYEYEPSNLPENACYS 64

Query: 1144 XXXXXXXXXXXYFTLXXXXXXXXXXXXG-------FWKRKCRXXXXXXXXXXXXXXS--- 995
                        +T                     +W+   R              +   
Sbjct: 65   YGYKGRRRHWYCYTKKFRVWKGEGRRRRRRKAKGGYWRSSGRVRDVVDPGGKVVIGTRSK 124

Query: 994  FVFYKRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNSHTED 815
            FVFY  +S +     RTDW++ EYAL+ H    +VLCRV++KS + N   +  L+   E 
Sbjct: 125  FVFYSGNSVQS--LIRTDWVLYEYALMHHVKASYVLCRVFVKSRAGNSNSENVLSCCAEQ 182

Query: 814  SFAAKNN---NVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSLGVVRSDQLIGNSNRLI 644
            + +A  +     DG     I E  V + N V     +D     LG+        +SN+L+
Sbjct: 183  NVSAVRHIGIQHDGFLTPDIVEAKVHRGNSVDAE--NDLSKYPLGLSTKLDAFPDSNKLV 240

Query: 643  -VSGYTFDDVDMDELKTNTI--FLEGDYLELDDLV 548
                   DD+ +D   T  +   LEGD++ELDDL+
Sbjct: 241  RTPELPGDDMLVDAGTTQELVSILEGDFIELDDLL 275


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