BLASTX nr result

ID: Coptis24_contig00006337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006337
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524929.1| chromatin binding protein, putative [Ricinus...   270   4e-70
ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog...   262   1e-67
ref|XP_002310115.1| predicted protein [Populus trichocarpa] gi|2...   262   1e-67
ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog...   259   1e-66
ref|XP_004141897.1| PREDICTED: mortality factor 4-like protein 1...   258   2e-66

>ref|XP_002524929.1| chromatin binding protein, putative [Ricinus communis]
           gi|223535764|gb|EEF37426.1| chromatin binding protein,
           putative [Ricinus communis]
          Length = 318

 Score =  270 bits (691), Expect = 4e-70
 Identities = 135/214 (63%), Positives = 170/214 (79%)
 Frame = +2

Query: 8   GRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQ 187
           GRS Q+KPK+ST+A+ +KED K+ V + KKRK +SG E KD +S  K VK+QIPSTLKKQ
Sbjct: 106 GRSAQTKPKTSTDAKVDKEDAKSNVAKGKKRKSDSGIE-KDNLSAEKLVKIQIPSTLKKQ 164

Query: 188 LLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKAL 367
           L+DD E+V Q  KLV+LPR+P VDDI+ KYL+++SKKD ++ +S+GEILKG+R YFDKAL
Sbjct: 165 LVDDWEFVIQQDKLVRLPRSPNVDDILTKYLEYRSKKDGMMTDSIGEILKGIRCYFDKAL 224

Query: 368 PIMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNL 547
           P+MLLYKKE  QY +A+ N+ SPST+YGAEHLLRLFVKLPE+L Y NI+EET+ +L Q L
Sbjct: 225 PVMLLYKKERHQYDDAVENDASPSTIYGAEHLLRLFVKLPELLAYVNIEEETLARLQQKL 284

Query: 548 HDFLKFLQKSQSMFFLSTYDVSQGVEANSMEDDD 649
            DFLKFLQK+QS FFLS YD S+  E      D+
Sbjct: 285 LDFLKFLQKNQSTFFLSAYDGSKVSEGKGKGKDE 318


>ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score =  262 bits (670), Expect = 1e-67
 Identities = 133/214 (62%), Positives = 168/214 (78%)
 Frame = +2

Query: 8   GRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQ 187
           GRS+Q K KSST+A+ +KED+KN V + KKRK ++G E K + +  K VK+QIP+TLKKQ
Sbjct: 107 GRSSQGKAKSSTDAKMDKEDVKNNVSKGKKRKHDAGVE-KGSGTVEKLVKIQIPATLKKQ 165

Query: 188 LLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKAL 367
           L+DD + VTQ  KLVKLPR+P VD+I+ KYL++KSKKD I  +S+GEILKG+R YFDKAL
Sbjct: 166 LVDDWDSVTQQDKLVKLPRSPTVDEILTKYLEYKSKKDGIAPDSIGEILKGIRCYFDKAL 225

Query: 368 PIMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNL 547
           P+MLLYKKE +QY +AI +N SPST+YGAEHLLRLFVKLPE+L Y  I+EET+ +L Q L
Sbjct: 226 PMMLLYKKERKQYNDAIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKL 285

Query: 548 HDFLKFLQKSQSMFFLSTYDVSQGVEANSMEDDD 649
            DFLKFLQK+QS FFLS YD ++  E      D+
Sbjct: 286 LDFLKFLQKNQSTFFLSAYDGTKVSEGKGKGKDE 319


>ref|XP_002310115.1| predicted protein [Populus trichocarpa] gi|222853018|gb|EEE90565.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  262 bits (670), Expect = 1e-67
 Identities = 131/203 (64%), Positives = 164/203 (80%)
 Frame = +2

Query: 8   GRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQ 187
           GRS+Q+KPK+ST+++ +KED K+ V + KKRK +SG E KD +   K VK+QIPSTLKKQ
Sbjct: 121 GRSSQTKPKNSTDSKMDKEDPKSNVAKGKKRKSDSGME-KDNLPVEKLVKIQIPSTLKKQ 179

Query: 188 LLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKAL 367
           L+DD E+VTQ  K VKLPR+P VDDI+ KYL++ SKKD +I +S+GEILKG+R YFDKAL
Sbjct: 180 LVDDWEFVTQQDKFVKLPRSPNVDDILTKYLEYMSKKDGMITDSIGEILKGIRCYFDKAL 239

Query: 368 PIMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNL 547
           P+MLLYKKE QQY + +  + SPST+YGAEHLLRLFVKLPE+L Y NI+E+T T+L Q L
Sbjct: 240 PVMLLYKKERQQYHDTVKIDVSPSTIYGAEHLLRLFVKLPELLAYVNIEEDTSTRLQQKL 299

Query: 548 HDFLKFLQKSQSMFFLSTYDVSQ 616
            DFLKFL K+QS FFLS YD S+
Sbjct: 300 LDFLKFLHKNQSTFFLSAYDGSK 322


>ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score =  259 bits (661), Expect = 1e-66
 Identities = 131/214 (61%), Positives = 166/214 (77%)
 Frame = +2

Query: 8   GRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQ 187
           GRS+Q K K ST+A+ +KED+KN V + KKRK ++G E K + +  K VK+QIP+TLKKQ
Sbjct: 107 GRSSQGKAKISTDAKMDKEDVKNNVSKGKKRKHDAGVE-KGSGTVEKLVKIQIPATLKKQ 165

Query: 188 LLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKAL 367
           L+DD + VTQ  KLVKLPR+P VD+IM KYL++KSKKD +  +S+GEILKG+R YFDKAL
Sbjct: 166 LVDDWDSVTQQDKLVKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIGEILKGIRCYFDKAL 225

Query: 368 PIMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNL 547
           P+MLLYKKE +QY ++I +N SPST+YGAEHLLRLFVKLPE+L Y  I+EET+ +L Q L
Sbjct: 226 PMMLLYKKERKQYNDSIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKL 285

Query: 548 HDFLKFLQKSQSMFFLSTYDVSQGVEANSMEDDD 649
            DFLKFLQK+QS FFLS YD  +  E      D+
Sbjct: 286 LDFLKFLQKNQSTFFLSAYDGPKVPEGKGKGKDE 319


>ref|XP_004141897.1| PREDICTED: mortality factor 4-like protein 1-like [Cucumis sativus]
           gi|449523073|ref|XP_004168549.1| PREDICTED: mortality
           factor 4-like protein 1-like [Cucumis sativus]
          Length = 316

 Score =  258 bits (659), Expect = 2e-66
 Identities = 128/214 (59%), Positives = 163/214 (76%)
 Frame = +2

Query: 8   GRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQ 187
           GRS Q+KPK+  +AR EKED KN   + KKRK +SGT  KD  S  K +K+QIPSTL+KQ
Sbjct: 105 GRSAQAKPKNLNDARVEKEDHKNNAPKGKKRKNDSGT--KDNQSVEKVIKIQIPSTLRKQ 162

Query: 188 LLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKAL 367
           L+DD E+VTQ  KLVKLPR+P VDDI+ KYL+++SK+D  I +S+GE+LKG+R YFDKAL
Sbjct: 163 LVDDWEFVTQQDKLVKLPRSPTVDDILTKYLEYRSKRDGTITDSLGEVLKGIRCYFDKAL 222

Query: 368 PIMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNL 547
           P++LLY KE  QY + + ++ SPSTVYGAEHLLRLFVKLPE+L Y NI++ET  +L Q L
Sbjct: 223 PVLLLYNKERDQYHKLVVDDVSPSTVYGAEHLLRLFVKLPELLAYVNIEDETQIRLHQKL 282

Query: 548 HDFLKFLQKSQSMFFLSTYDVSQGVEANSMEDDD 649
            DFLKFLQK+QS FF+S Y+  +G E      +D
Sbjct: 283 LDFLKFLQKNQSTFFVSAYEGCKGTEGKGKSKND 316


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