BLASTX nr result

ID: Coptis24_contig00006333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006333
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22285.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
gb|AFK43731.1| unknown [Lotus japonicus]                              130   1e-28
ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold ...   128   4e-28
ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|1...   128   4e-28

>emb|CBI22285.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/79 (81%), Positives = 74/79 (93%)
 Frame = -2

Query: 490 AQWPKEKDNGPRTVKDIKIISAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDK 311
           AQWPKEK+NGP+TVKD+K+ISAG+ILENN+T+GECRSP+CDIPG VTTMHVVVQ PS+DK
Sbjct: 40  AQWPKEKENGPKTVKDVKLISAGKILENNRTIGECRSPLCDIPGGVTTMHVVVQPPSSDK 99

Query: 310 GEKKTANDPKQNKCVCVIL 254
            EKK A+ PKQNKCVCVIL
Sbjct: 100 -EKKVASQPKQNKCVCVIL 117


>ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|222867095|gb|EEF04226.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/79 (77%), Positives = 71/79 (89%)
 Frame = -2

Query: 490 AQWPKEKDNGPRTVKDIKIISAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDK 311
           AQWPKEK+NGPRT+KD+K+ISAG+ILENN+T+GECRSP+CDIPG VTTMHVVVQ  S +K
Sbjct: 40  AQWPKEKENGPRTLKDVKLISAGKILENNRTVGECRSPLCDIPGGVTTMHVVVQPSSVEK 99

Query: 310 GEKKTANDPKQNKCVCVIL 254
           G KK AN  KQ+KCVCVIL
Sbjct: 100 G-KKGANQAKQSKCVCVIL 117


>gb|AFK43731.1| unknown [Lotus japonicus]
          Length = 117

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/79 (73%), Positives = 73/79 (92%)
 Frame = -2

Query: 490 AQWPKEKDNGPRTVKDIKIISAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDK 311
           AQWPK+K+NGPRTVKD+K+ISAG+IL+NN+T+GEC+SP+CD P TVTTMHVVVQ P+T+K
Sbjct: 40  AQWPKDKENGPRTVKDMKLISAGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPTTEK 99

Query: 310 GEKKTANDPKQNKCVCVIL 254
            EKK A++ KQNKC+CVIL
Sbjct: 100 -EKKAASETKQNKCLCVIL 117


>ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold protein 2-like [Glycine
           max]
          Length = 117

 Score =  128 bits (322), Expect = 4e-28
 Identities = 57/79 (72%), Positives = 71/79 (89%)
 Frame = -2

Query: 490 AQWPKEKDNGPRTVKDIKIISAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDK 311
           AQWPK+K+NGP+T+KD+K+ISAG+ILENN+T+GEC+SP+CD P TVTTMHVVVQ P+T+K
Sbjct: 40  AQWPKDKENGPKTIKDVKLISAGKILENNRTVGECQSPLCDTPDTVTTMHVVVQHPATEK 99

Query: 310 GEKKTANDPKQNKCVCVIL 254
            EKK AN   QNKC+CVIL
Sbjct: 100 -EKKAANKATQNKCMCVIL 117


>ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|118489660|gb|ABK96631.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222848339|gb|EEE85886.1| predicted protein [Populus
           trichocarpa]
          Length = 117

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/79 (73%), Positives = 70/79 (88%)
 Frame = -2

Query: 490 AQWPKEKDNGPRTVKDIKIISAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDK 311
           A WPKEK+NGPRT+KD+K+ISAG+ILENN+T+GEC+SP+CDIPG VTTMHVVV   S +K
Sbjct: 40  AHWPKEKENGPRTLKDVKLISAGKILENNRTVGECQSPLCDIPGGVTTMHVVVHPSSVEK 99

Query: 310 GEKKTANDPKQNKCVCVIL 254
            EKK AN P+Q+KCVCVIL
Sbjct: 100 -EKKAANQPRQSKCVCVIL 117


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