BLASTX nr result

ID: Coptis24_contig00006322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006322
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]   145   5e-33
emb|CBI18334.3| unnamed protein product [Vitis vinifera]              141   1e-31
ref|XP_002522935.1| conserved hypothetical protein [Ricinus comm...   140   2e-31
ref|XP_002451517.1| hypothetical protein SORBIDRAFT_04g003130 [S...   132   5e-29
ref|XP_002331422.1| predicted protein [Populus trichocarpa] gi|2...   129   7e-28

>emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]
          Length = 654

 Score =  145 bits (367), Expect = 5e-33
 Identities = 97/244 (39%), Positives = 135/244 (55%), Gaps = 22/244 (9%)
 Frame = +2

Query: 2   LTQDKTQLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKV 181
           + Q+K+QL+IFFP+L K+KS+P+SGTGKHKYSF+R+EVPSLP HFCDCEEH G   IA+ 
Sbjct: 131 VNQEKSQLRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPHIAQK 190

Query: 182 KQISANEEQTEIMKEEELNMMRSVMDKIFNRE--------VKPSSEGRRVEVPTEEESPK 337
           +     E Q+  M ++ELNMM SVM+KIF RE        V   ++G    + +  E   
Sbjct: 191 QYFCDPEPQSGGMNKDELNMMNSVMNKIFERETDLKVAYNVTGLTKGGHDSLKSTNE--- 247

Query: 338 HSIDDLPSESEADED------------NDGDNIVINIVRG--GKTKLGSVEKGRLENVDQ 475
             IDD  S+  ADED             D DN+VIN+  G      LGS E+  + +++Q
Sbjct: 248 RLIDDNESDHAADEDELRVDGNESDLAEDEDNLVINMFTGRHRMALLGSQEQEAI-SMNQ 306

Query: 476 ESGFGKLQPSNVAPSHNKIKARKEVSGNPSDTITKKPRLLLSDESNINEFTSTMHKRKEC 655
           +S F     S   P+   + +            TKK + L  DES+ NEF S +  +K  
Sbjct: 307 KSRFNDTWTSTDGPAPITLPS------------TKKRKSLHIDESDGNEFLSAIPGKKPS 354

Query: 656 PETN 667
            +T+
Sbjct: 355 LQTH 358


>emb|CBI18334.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  141 bits (355), Expect = 1e-31
 Identities = 90/224 (40%), Positives = 127/224 (56%), Gaps = 2/224 (0%)
 Frame = +2

Query: 2   LTQDKTQLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKV 181
           + Q+K+QL+IFFP+L K+KS+P+SGTGKHKYSF+R+EVPSLP HFCDCEEH G   IA+ 
Sbjct: 301 VNQEKSQLRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPHIAQK 360

Query: 182 KQISANEEQTEIMKEEELNMMRSVMDKIFNREVKPSSEGRRVEVPTEEESPKHSIDDLPS 361
           +     E Q+  M ++ELN+M SVM+KIF RE     E R              +D    
Sbjct: 361 QYFCDPESQSGGMNKDELNVMNSVMNKIFERETDLKDELR--------------VDG--- 403

Query: 362 ESEADEDNDGDNIVINIVRG--GKTKLGSVEKGRLENVDQESGFGKLQPSNVAPSHNKIK 535
            +E+D   D DN+VIN+  G      LGS E+  + +++Q+S F     S   P+   + 
Sbjct: 404 -NESDLVEDEDNLVINMFTGRHRMALLGSQEQEAI-SMNQKSRFNDTWTSTDGPAPITLP 461

Query: 536 ARKEVSGNPSDTITKKPRLLLSDESNINEFTSTMHKRKECPETN 667
           +            TKK + L  DES+ NEF S +  +K   +T+
Sbjct: 462 S------------TKKRKSLHIDESDGNEFLSAIPGKKPSLQTH 493


>ref|XP_002522935.1| conserved hypothetical protein [Ricinus communis]
           gi|223537829|gb|EEF39446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 636

 Score =  140 bits (353), Expect = 2e-31
 Identities = 80/181 (44%), Positives = 109/181 (60%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   LTQDKTQLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKV 181
           L+ DK QL++FFPRL K+KS+P+SGTGKHKYSFRRVEVPSLP+HFCDCEEH G+    K 
Sbjct: 134 LSLDKKQLRLFFPRLQKLKSIPFSGTGKHKYSFRRVEVPSLPLHFCDCEEHSGSLHAPKG 193

Query: 182 KQISANEEQTEIMKEEELNMMRSVMDKIFNREVKPSSEGRRVEVPTEEESPKHSIDDLP- 358
           KQI   EEQ   + +EEL++M SVM+++F  E    +     E+  EE+   ++ D+   
Sbjct: 194 KQIPVLEEQGGGVNQEELDLMISVMNRLFEIENVSGAPHSDNELTKEEDYNTNATDNPQL 253

Query: 359 SESEADEDNDGDNIVINIVRGGKTKLGSVEKGRLENVDQESGFGKLQPSNVAPSHNKIKA 538
            ESE     D D+++IN+V   K    S         +QES   K Q S   P+   ++ 
Sbjct: 254 DESEGYSTADEDDLIINVVSRRKETAFS---------NQESKLNKRQASEDRPAQEVLRK 304

Query: 539 R 541
           R
Sbjct: 305 R 305


>ref|XP_002451517.1| hypothetical protein SORBIDRAFT_04g003130 [Sorghum bicolor]
           gi|241931348|gb|EES04493.1| hypothetical protein
           SORBIDRAFT_04g003130 [Sorghum bicolor]
          Length = 569

 Score =  132 bits (333), Expect = 5e-29
 Identities = 88/237 (37%), Positives = 131/237 (55%), Gaps = 36/237 (15%)
 Frame = +2

Query: 20  QLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQISAN 199
           ++ I+FP+L K+K++P  GTGKHKYSFR +EVPS PIHFCDCEEHCG  E       +AN
Sbjct: 144 KINIYFPKLRKMKALPLKGTGKHKYSFRHIEVPSYPIHFCDCEEHCGPPE-------AAN 196

Query: 200 EEQTEIMK----EEELNMMRSVMDKIFNRE------------------VKPSSEGRRVEV 313
           +E   ++     E+E N+M SVM+K+F +E                  ++PS+    +++
Sbjct: 197 DEYASVLNAAAYEKERNIMNSVMNKLFEKENEHLDSCEVGKFDGHTDTIEPSNAVSDMQI 256

Query: 314 PTEEESPKHSIDDLP---SESEADEDNDGDNIVINIV--RGGKTKLG-SVEKGRLENVDQ 475
               E PK  +D+LP   +E  +DED D D++VINI   +  K+ +G ++EK   + V++
Sbjct: 257 EETGEGPKEDLDNLPMEETEESSDEDLD-DDLVINIAPRKSNKSAVGANMEK---QEVNK 312

Query: 476 ESGFGKLQPSNVAPSHNKIKARKEVSGNP--------SDTITKKPRLLLSDESNINE 622
           +S   K +P    PS  K + + E S  P        SDT T    L L  E++ NE
Sbjct: 313 DSQLQK-RPRIEEPSLPKKRQKSEASSEPIKRNGEHVSDTRTTGKTLPLKSEASQNE 368


>ref|XP_002331422.1| predicted protein [Populus trichocarpa] gi|222873636|gb|EEF10767.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score =  129 bits (323), Expect = 7e-28
 Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 5/217 (2%)
 Frame = +2

Query: 2   LTQDKTQLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHC-GASEIAK 178
           L  +  QL++FFP L KIKS+P+ GTGKH+YSFRRVEVP LP HFCDCEEH    +  AK
Sbjct: 156 LLSENKQLRLFFPGLGKIKSIPFRGTGKHRYSFRRVEVPPLPKHFCDCEEHSEPPAAAAK 215

Query: 179 VKQISANEEQTEIMKEEELNMMRSVMDKIFNREVKPSSEGRRVEVPTEEESPKHSIDDLP 358
            + I   EEQ   M +EEL +M SVM+K+F  E    +    +E+  + +    + D  P
Sbjct: 216 CRHIPIMEEQGAGMDKEELTLMNSVMNKLFQMENVSDNACCEIELDKKVDDSMKTTDKPP 275

Query: 359 -SESEADEDNDGDNIVINIVRGGKTKLGSVEKGRLENVDQESGFGKLQPSNVAPSHNKIK 535
             E+E D D D DN++IN+ R    +  S ++   + + +       Q  N  PS+ K K
Sbjct: 276 LEENEGDIDEDDDNLIINMRRRFNVRQTSTDEPTQKVLQK-------QKRNTTPSNKKRK 328

Query: 536 ARKEVSGNPSDTITKKP---RLLLSDESNINEFTSTM 637
                  N S+ +   P     LL  +S  +  + T+
Sbjct: 329 IVLNEESNTSEGMPAMPGGNGSLLEQQSKSDNASETL 365


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