BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006312
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299450.1| predicted protein [Populus trichocarpa] gi|2...   244   1e-62
ref|XP_002303670.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62
ref|XP_002273171.1| PREDICTED: cyclin-dependent kinase E-1 [Viti...   240   1e-61
ref|XP_004144669.1| PREDICTED: cyclin-dependent kinase E-1-like ...   234   6e-60
ref|XP_002518859.1| cdk8, putative [Ricinus communis] gi|2235418...   232   3e-59

>ref|XP_002299450.1| predicted protein [Populus trichocarpa] gi|222846708|gb|EEE84255.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  244 bits (622), Expect = 1e-62
 Identities = 125/166 (75%), Positives = 134/166 (80%), Gaps = 1/166 (0%)
 Frame = +2

Query: 2   LLSKMLEYDPRKRITAAQALEHDYFRNDPLPGRNALVPCQPGEKVVNYPARPVDTTTDFE 181
           LLSKMLEYDPRKRITAAQA+EHDYFR++PLPGRNALVP QPGEKV+NYP RPVDT TDFE
Sbjct: 307 LLSKMLEYDPRKRITAAQAIEHDYFRSEPLPGRNALVPSQPGEKVINYPTRPVDTNTDFE 366

Query: 182 GTTSVQPPQPASSGNAISGGGVAASLVTARPVPRNMPPMVGMQRMPGPGMAAFNLSSQAG 361
           GTTS+QPPQP SSGNA+SGG   A  + +R  PR  P  VGMQRM   GMAA+NLSSQAG
Sbjct: 367 GTTSLQPPQPVSSGNAVSGGMPGAHGINSRSAPR--PMSVGMQRMQSQGMAAYNLSSQAG 424

Query: 362 MGSGMNPGGIPMQRGVGGQPHQQQQLRRKDPGMGLPGYPP-QKSRR 496
           MG GMNPG IPM RGV  QPHQQ  LRRKDP     GYPP QKSRR
Sbjct: 425 MGGGMNPGNIPMPRGV-AQPHQQHHLRRKDPPGTGTGYPPQQKSRR 469


>ref|XP_002303670.1| predicted protein [Populus trichocarpa] gi|222841102|gb|EEE78649.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  241 bits (615), Expect = 6e-62
 Identities = 124/166 (74%), Positives = 134/166 (80%), Gaps = 1/166 (0%)
 Frame = +2

Query: 2   LLSKMLEYDPRKRITAAQALEHDYFRNDPLPGRNALVPCQPGEKVVNYPARPVDTTTDFE 181
           LLSKMLEYDP+KRITAAQALEHDYFR++PLPGRNALVP QPGEKV+NYP RPVDT TDFE
Sbjct: 307 LLSKMLEYDPQKRITAAQALEHDYFRSEPLPGRNALVPSQPGEKVINYPTRPVDTNTDFE 366

Query: 182 GTTSVQPPQPASSGNAISGGGVAASLVTARPVPRNMPPMVGMQRMPGPGMAAFNLSSQAG 361
           GTTS+QPPQP SSGNA+SGG   A  V  R  PR MP  +G+QRM   GM A+NL+SQAG
Sbjct: 367 GTTSLQPPQPVSSGNAVSGGIPGAHGVNNRSAPRPMP--IGLQRMQTQGMTAYNLASQAG 424

Query: 362 MGSGMNPGGIPMQRGVGGQPHQQQQLRRKDPGMGLPGYPP-QKSRR 496
           MG GMNPG IPM RGV  QPHQQ QLRRKDP     GYPP QKSRR
Sbjct: 425 MGGGMNPGNIPMPRGV-AQPHQQHQLRRKDPPGTGTGYPPQQKSRR 469


>ref|XP_002273171.1| PREDICTED: cyclin-dependent kinase E-1 [Vitis vinifera]
           gi|296082615|emb|CBI21620.3| unnamed protein product
           [Vitis vinifera]
          Length = 481

 Score =  240 bits (612), Expect = 1e-61
 Identities = 123/167 (73%), Positives = 138/167 (82%), Gaps = 2/167 (1%)
 Frame = +2

Query: 2   LLSKMLEYDPRKRITAAQALEHDYFRNDPLPGRNALVPCQPG-EKVVNYPARPVDTTTDF 178
           LLSKMLEYDPRKRITAAQAL+H+YFR++PLPGRNALVP Q G EKV+NYP RPVDTTTDF
Sbjct: 316 LLSKMLEYDPRKRITAAQALDHEYFRSEPLPGRNALVPSQAGAEKVMNYPTRPVDTTTDF 375

Query: 179 EGTTSVQPPQPASSGNAISGGGVAASLVTARPVPRNMPPMVGMQRMPGPGMAAFNLSSQA 358
           EGT S+Q  QP SSGNA+SG   A  +V  R VPR M P+VGMQR+   GM+A+NL+SQA
Sbjct: 376 EGTNSLQTSQPVSSGNAVSGSMAAGHVVPNRSVPRPM-PVVGMQRIQAQGMSAYNLTSQA 434

Query: 359 GMGSGMNPGGIPMQRGVGGQPHQQQQLRRKDPGMGLPGYPP-QKSRR 496
            MG GMNPG IPMQRGV  Q H QQQ+RRKDPGMG+PGYPP QKSRR
Sbjct: 435 AMGGGMNPGSIPMQRGVAAQAH-QQQMRRKDPGMGMPGYPPQQKSRR 480


>ref|XP_004144669.1| PREDICTED: cyclin-dependent kinase E-1-like [Cucumis sativus]
          Length = 484

 Score =  234 bits (598), Expect = 6e-60
 Identities = 122/167 (73%), Positives = 136/167 (81%), Gaps = 2/167 (1%)
 Frame = +2

Query: 2   LLSKMLEYDPRKRITAAQALEHDYFRNDPLPGRNALVPCQPGEKVVNYPARPVDTTTDFE 181
           LLSKMLEYDPRKRITAAQALEH+YFR +PLPG NALVP QPGEKV+NYP RPVDTTTDFE
Sbjct: 325 LLSKMLEYDPRKRITAAQALEHEYFRLEPLPGYNALVPNQPGEKVINYPTRPVDTTTDFE 384

Query: 182 GTTSVQPPQPASSGNAIS--GGGVAASLVTARPVPRNMPPMVGMQRMPGPGMAAFNLSSQ 355
           GTTS+QP Q  +SGNA++  GG +      AR VPR M   VGM RMP   MAA+NL+SQ
Sbjct: 385 GTTSLQPSQTVTSGNAVNMQGGHM------ARSVPRAMG--VGMPRMPHQSMAAYNLASQ 436

Query: 356 AGMGSGMNPGGIPMQRGVGGQPHQQQQLRRKDPGMGLPGYPPQKSRR 496
           AGM  GMNPGGIPMQRGV  Q HQQQQLRRKDPGMG+PGYPPQ+ ++
Sbjct: 437 AGM--GMNPGGIPMQRGVSSQAHQQQQLRRKDPGMGMPGYPPQQKQQ 481


>ref|XP_002518859.1| cdk8, putative [Ricinus communis] gi|223541846|gb|EEF43392.1| cdk8,
           putative [Ricinus communis]
          Length = 477

 Score =  232 bits (592), Expect = 3e-59
 Identities = 117/165 (70%), Positives = 128/165 (77%)
 Frame = +2

Query: 2   LLSKMLEYDPRKRITAAQALEHDYFRNDPLPGRNALVPCQPGEKVVNYPARPVDTTTDFE 181
           LLSKMLEYDPRKRITAAQALEH+YFR +PLPG NALVP QPGEKV+NYP RPVDT TDFE
Sbjct: 315 LLSKMLEYDPRKRITAAQALEHEYFRIEPLPGCNALVPSQPGEKVINYPTRPVDTNTDFE 374

Query: 182 GTTSVQPPQPASSGNAISGGGVAASLVTARPVPRNMPPMVGMQRMPGPGMAAFNLSSQAG 361
           GTTS+QPPQ  SSGNA+SGG      V  R  PR MP  +GMQRM    MAA+N++SQAG
Sbjct: 375 GTTSLQPPQTVSSGNAVSGGIAGGHGVAGRSAPRPMP--MGMQRMQPQAMAAYNIASQAG 432

Query: 362 MGSGMNPGGIPMQRGVGGQPHQQQQLRRKDPGMGLPGYPPQKSRR 496
           MG GMNP GIPM RGV  QPHQQ   R+  PG+G  GYP QKSRR
Sbjct: 433 MGGGMNPAGIPMTRGVAAQPHQQHLRRKDPPGLG-TGYPQQKSRR 476