BLASTX nr result

ID: Coptis24_contig00006291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006291
         (1326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277768.1| PREDICTED: alpha-ketoglutarate-dependent dio...   403   e-110
emb|CAN72697.1| hypothetical protein VITISV_011566 [Vitis vinifera]   402   e-110
ref|XP_002304683.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
gb|AEL99108.1| alpha-ketoglutarate-dependent dioxygenase alkB, p...   382   e-104
gb|AEL99107.1| alpha-ketoglutarate-dependent dioxygenase alkB, p...   380   e-103

>ref|XP_002277768.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB [Vitis
            vinifera] gi|297738457|emb|CBI27658.3| unnamed protein
            product [Vitis vinifera]
          Length = 360

 Score =  403 bits (1035), Expect = e-110
 Identities = 216/367 (58%), Positives = 247/367 (67%), Gaps = 37/367 (10%)
 Frame = +1

Query: 22   MYGSTGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLSDVLDFKKA 201
            MYGS G +  DD+ERTAFR                             VDLS+V+DFK  
Sbjct: 1    MYGSYGVS--DDAERTAFRRAEKKYKVYYDDSKSSKKKKQLKQ-----VDLSEVVDFKAI 53

Query: 202  AQ-----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFPQP 366
             +     GE+P G + L  DF+ PVFCIENRPGFYFIP AL++EEQ  WI+ESLISFPQP
Sbjct: 54   LRSFNQSGEVPPGTFALQCDFDRPVFCIENRPGFYFIPDALTVEEQGRWIRESLISFPQP 113

Query: 367  PNRTNHYAIYGHIHDLFVAAQNKKVL------------------------RWQ------- 453
             NRTNH AIYG I DLF+AA+ +K+L                        RW+       
Sbjct: 114  YNRTNHNAIYGPIRDLFMAAKERKILVEEEDSSGGLDSLSNSSITNMDAERWKFYEENTV 173

Query: 454  -SSNMDQKEVAATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPAM 630
             S     K ++A+ LLRKLRWSTLGLQFDWSKR+YNV+LPHNKIP++LC LAK MAAPAM
Sbjct: 174  SSRGSTCKSISASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDALCDLAKEMAAPAM 233

Query: 631  GTGEEFQPEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPI 810
              G+ FQPEAAIVNYF  GDMLGGHLDDMEADW KPIVS+SLGCKAIFLLGGKSR+D P+
Sbjct: 234  SKGKVFQPEAAIVNYFGLGDMLGGHLDDMEADWTKPIVSMSLGCKAIFLLGGKSRDDPPL 293

Query: 811  AMFLRSGDVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXX 990
            AMF+RSGDVVLMAG+ARECFHGVPRIFTD+ENAEI PL L  SHEDDV  L+Y       
Sbjct: 294  AMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIRSSRIN 353

Query: 991  XXXXQVF 1011
                QVF
Sbjct: 354  INIRQVF 360


>emb|CAN72697.1| hypothetical protein VITISV_011566 [Vitis vinifera]
          Length = 366

 Score =  402 bits (1034), Expect = e-110
 Identities = 216/368 (58%), Positives = 247/368 (67%), Gaps = 38/368 (10%)
 Frame = +1

Query: 22   MYGSTGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VDLSDVLDFKK 198
            MYGS G +  DD+ERTAFR                              VDLS+V+DFK 
Sbjct: 1    MYGSYGVS--DDAERTAFRRAEKKYKVYYDDSKSSKNVLENFRKKQLKQVDLSEVVDFKA 58

Query: 199  AAQ-----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFPQ 363
              +     GE+P G + L  DF+ PVFCIENRPGFYFIP AL++EEQ  WI+ESLISFPQ
Sbjct: 59   ILRSFNQSGEVPPGTFALQCDFDRPVFCIENRPGFYFIPDALTVEEQGRWIRESLISFPQ 118

Query: 364  PPNRTNHYAIYGHIHDLFVAAQNKKVL------------------------RWQ------ 453
            P NRTNH AIYG I DLF+AA+ +K+L                        RW+      
Sbjct: 119  PYNRTNHNAIYGPIRDLFMAAKERKILVEEEDSSGGLDSLSNSSITNMDAERWKFYEENT 178

Query: 454  --SSNMDQKEVAATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPA 627
              S     K ++A+ LLRKLRWSTLGLQFDWSKR+YNV+LPHNKIP++LC LAK MAAPA
Sbjct: 179  VSSRGSTCKSISASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDALCDLAKEMAAPA 238

Query: 628  MGTGEEFQPEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMP 807
            M  G+ FQPEAAIVNYF  GDMLGGHLDDMEADW KPIVS+SLGCKAIFLLGGKSR+D P
Sbjct: 239  MSKGKVFQPEAAIVNYFGLGDMLGGHLDDMEADWTKPIVSMSLGCKAIFLLGGKSRDDPP 298

Query: 808  IAMFLRSGDVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXX 987
            +AMF+RSGDVVLMAG+ARECFHGVPRIFTD+ENAEI PL L  SHEDDV  L+Y      
Sbjct: 299  LAMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIRSSRI 358

Query: 988  XXXXXQVF 1011
                 QVF
Sbjct: 359  NINIRQVF 366


>ref|XP_002304683.1| predicted protein [Populus trichocarpa] gi|222842115|gb|EEE79662.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  398 bits (1022), Expect = e-108
 Identities = 215/356 (60%), Positives = 246/356 (69%), Gaps = 26/356 (7%)
 Frame = +1

Query: 22   MYGSTGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VDLSDVLDFK 195
            MYGS  A T DD++RT FR                               VDLS+VLDFK
Sbjct: 1    MYGSDKAVT-DDTDRTEFRKTEKKYKLYYDQNSKRYDLIFPFLKKKQPKQVDLSEVLDFK 59

Query: 196  KAAQ-----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFP 360
                     GE+P  I  +   F+ PVF +E+RPGFYFIPGALS++EQC WI+ESL+SFP
Sbjct: 60   SFLDSYHQNGELPPEIVVVDCRFDRPVFGLESRPGFYFIPGALSVDEQCRWIRESLMSFP 119

Query: 361  QPPNRTNHYAIYGHIHDLFVAAQNKKVL-----------RWQSSNMDQ--------KEVA 483
            QPPNRTNH AIYG I DLF+AA+ +KVL           RW     D         K V+
Sbjct: 120  QPPNRTNHNAIYGPISDLFIAAKERKVLVEDENMPANTRRWSFCEEDSVLLRGKSCKPVS 179

Query: 484  ATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPAMGTGEEFQPEAA 663
            A+ LLRKLRWSTLGLQFDWSKR+YNV+LPHNKIP+ LCQLAK++AAPAM  GEEF PEAA
Sbjct: 180  ASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDGLCQLAKKLAAPAMPVGEEFHPEAA 239

Query: 664  IVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSGDVVL 843
            IVNYF+SGD LGGHLDDMEADW+KPIVS+SLGCKAIFLLGGKSRED P+AMFLRSGDVVL
Sbjct: 240  IVNYFASGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDVVL 299

Query: 844  MAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXXQVF 1011
            MAG+ARECFHGVPRIFTDKENAEIT L L+   E+D  +L+Y           QVF
Sbjct: 300  MAGEARECFHGVPRIFTDKENAEITALELHFCDEND--ILEYIRTSRININIRQVF 353


>gb|AEL99108.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
            latifolia]
          Length = 354

 Score =  382 bits (982), Expect = e-104
 Identities = 206/360 (57%), Positives = 239/360 (66%), Gaps = 33/360 (9%)
 Frame = +1

Query: 31   STGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLSDVLDFKKAAQ- 207
            + GAT  DD ERTAFR                             VDLS+V+DFK   + 
Sbjct: 3    ANGAT--DDLERTAFRRAEKKYKLYYGQNSRKKKQQPRP------VDLSEVVDFKLILET 54

Query: 208  ----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFPQPPNR 375
                GE P G++ + +  EFPV C++NRPGFYFIPGALS+EEQC WI+ESL SFPQPPNR
Sbjct: 55   FDRTGETPDGVHVIRTGSEFPVICLDNRPGFYFIPGALSLEEQCQWIRESLTSFPQPPNR 114

Query: 376  TNHYAIYGHIHDLFVAAQNKKVL-------------------RW----QSSNMDQK---- 474
            TNH A+YG I+DLF AAQ  KVL                   RW    +S N+  K    
Sbjct: 115  TNHNALYGPINDLFAAAQEGKVLVEEELSPNVTQSLDNGQARRWTFSSESGNVSLKGSGG 174

Query: 475  -EVAATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPAMGTGEEFQ 651
              + A+ LLRKL WSTLGLQFDWS+R+YNV LPHNKIP+ LCQLAK++A PAM  G+ F+
Sbjct: 175  NSILASVLLRKLHWSTLGLQFDWSQRNYNVDLPHNKIPDKLCQLAKKLAVPAMPLGDNFK 234

Query: 652  PEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSG 831
            PEAAIVNYF+SGD LGGHLDDME DW+KPIVS+SLGCK IFLLGGKSRED P+AMFLRSG
Sbjct: 235  PEAAIVNYFASGDTLGGHLDDMELDWSKPIVSMSLGCKGIFLLGGKSREDEPLAMFLRSG 294

Query: 832  DVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXXQVF 1011
            DVVLMAG+ARECFHGVPRIFTD  N+EIT L  +LS + D   LDY           QVF
Sbjct: 295  DVVLMAGEARECFHGVPRIFTDAHNSEITALEKHLSTDSDHCFLDYIKTSRININIRQVF 354


>gb|AEL99107.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
            latifolia]
          Length = 354

 Score =  380 bits (977), Expect = e-103
 Identities = 206/360 (57%), Positives = 239/360 (66%), Gaps = 33/360 (9%)
 Frame = +1

Query: 31   STGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLSDVLDFKKAAQ- 207
            + GAT  DD ERTAFR                             VDLS+V+DFK   + 
Sbjct: 3    ANGAT--DDLERTAFRRAEKKYKLYYGQNSRKKKQQPRP------VDLSEVVDFKLILET 54

Query: 208  ----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFPQPPNR 375
                GE P G++ + +  EFPV C++NRPGFYFIPGALS+EEQC WI+ESL SFPQPPNR
Sbjct: 55   FDRTGETPDGVHVIRTGSEFPVICLDNRPGFYFIPGALSLEEQCQWIRESLTSFPQPPNR 114

Query: 376  TNHYAIYGHIHDLFVAAQNKKVL-------------------RW----QSSNMDQK---- 474
            TNH A+YG I+DLF AAQ  KVL                   RW    +S N+  K    
Sbjct: 115  TNHNALYGPINDLFAAAQEGKVLVEEELSPNVTQSLDNGQARRWTFSSESGNVSLKGSGG 174

Query: 475  -EVAATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPAMGTGEEFQ 651
              + A+ LLRKLRWSTLGLQFDWS+R+YNV L HNKIP+ LCQLAK++A PAM  G+ F+
Sbjct: 175  NSILASVLLRKLRWSTLGLQFDWSQRNYNVDLLHNKIPDKLCQLAKKLAVPAMPLGDNFK 234

Query: 652  PEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSG 831
            PEAAIVNYF+SGD LGGHLDDME DW+KPIVS+SLGCK IFLLGGKSRED P+AMFLRSG
Sbjct: 235  PEAAIVNYFASGDTLGGHLDDMELDWSKPIVSMSLGCKGIFLLGGKSREDEPLAMFLRSG 294

Query: 832  DVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXXQVF 1011
            DVVLMAG+ARECFHGVPRIFTD  N+EIT L  +LS + D   LDY           QVF
Sbjct: 295  DVVLMAGEARECFHGVPRIFTDAHNSEITALEKHLSTDSDHCFLDYIKTSRININIRQVF 354


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