BLASTX nr result

ID: Coptis24_contig00006284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006284
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242344.1| uncharacterized protein LOC100818292 [Glycin...   138   4e-31
ref|NP_001242462.1| uncharacterized protein LOC100786575 [Glycin...   138   4e-31
ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g...   137   7e-31
tpg|DAA43716.1| TPA: hypothetical protein ZEAMMB73_272794 [Zea m...   137   7e-31
gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]                    137   7e-31

>ref|NP_001242344.1| uncharacterized protein LOC100818292 [Glycine max]
           gi|255640969|gb|ACU20764.1| unknown [Glycine max]
          Length = 311

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = +2

Query: 2   MLAADVHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQ 181
           MLAADVHLGTKNCDFQM+RYVFKRRTDGI+IINLGKTWEKLQLAAR+IVAIENPQDIIVQ
Sbjct: 24  MLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQ 83

Query: 182 SARPYGQRA 208
           SARPYGQRA
Sbjct: 84  SARPYGQRA 92


>ref|NP_001242462.1| uncharacterized protein LOC100786575 [Glycine max]
           gi|255639911|gb|ACU20248.1| unknown [Glycine max]
          Length = 313

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = +2

Query: 2   MLAADVHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQ 181
           MLAADVHLGTKNCDFQM+RYVFKRRTDGI+IINLGKTWEKLQLAAR+IVAIENPQDIIVQ
Sbjct: 24  MLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQ 83

Query: 182 SARPYGQRA 208
           SARPYGQRA
Sbjct: 84  SARPYGQRA 92


>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] gi|313103629|pdb|3IZ6|A
           Chain A, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|33146943|dbj|BAC79991.1|
           putative 40S ribosomal protein [Oryza sativa Japonica
           Group] gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza
           sativa Japonica Group] gi|125601085|gb|EAZ40661.1|
           hypothetical protein OsJ_25132 [Oryza sativa Japonica
           Group] gi|215678910|dbj|BAG96340.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215734975|dbj|BAG95697.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740977|dbj|BAG97472.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764959|dbj|BAG86656.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 305

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = +2

Query: 2   MLAADVHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQ 181
           MLAADVHLGTKNCDFQM+RYV+KRRTDGI+IINLGKTWEKLQLAARVIVAIENPQDIIVQ
Sbjct: 22  MLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQ 81

Query: 182 SARPYGQRA 208
           SARPYGQRA
Sbjct: 82  SARPYGQRA 90


>tpg|DAA43716.1| TPA: hypothetical protein ZEAMMB73_272794 [Zea mays]
          Length = 310

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = +2

Query: 2   MLAADVHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQ 181
           MLAADVHLGTKNCDFQM+RYVFKRRTDGI+IINLGKTWEKLQLAARVIVAIENPQD+IVQ
Sbjct: 24  MLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARVIVAIENPQDMIVQ 83

Query: 182 SARPYGQRA 208
           SARPYGQRA
Sbjct: 84  SARPYGQRA 92


>gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]
          Length = 308

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = +2

Query: 2   MLAADVHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQ 181
           MLAADVHLGTKNCDFQM+RYVFKRRTDGI+IINLGKTW+KLQLAARVIVAIENPQDIIVQ
Sbjct: 23  MLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIENPQDIIVQ 82

Query: 182 SARPYGQRA 208
           SARPYGQRA
Sbjct: 83  SARPYGQRA 91


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