BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006277
         (1524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529466.1| Aspartate carbamoyltransferase 2, chloroplas...   575   e-161
ref|XP_002300331.1| predicted protein [Populus trichocarpa] gi|2...   561   e-157
ref|XP_002277415.2| PREDICTED: aspartate carbamoyltransferase 2,...   559   e-157
sp|Q43064.1|PYRB3_PEA RecName: Full=Aspartate carbamoyltransfera...   559   e-157
sp|Q43087.1|PYRB2_PEA RecName: Full=Aspartate carbamoyltransfera...   556   e-156

>ref|XP_002529466.1| Aspartate carbamoyltransferase 2, chloroplast precursor, putative
            [Ricinus communis] gi|223531082|gb|EEF32932.1| Aspartate
            carbamoyltransferase 2, chloroplast precursor, putative
            [Ricinus communis]
          Length = 360

 Score =  575 bits (1482), Expect = e-161
 Identities = 294/339 (86%), Positives = 316/339 (93%)
 Frame = -3

Query: 1159 LLLSRTRCHALETEKVLNTDKAFSFSAGDKFQLQDILDAQQFDRDILNAIFKVARQMEDI 980
            L+ S  RC ALE   + N D    FS G++FQL+D+++AQQFDR+ILNAIF+VAR+ME I
Sbjct: 27   LIRSGVRCSALE---IGNAD--LLFSTGNRFQLEDVIEAQQFDREILNAIFEVAREMEKI 81

Query: 979  EKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLE 800
            EKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLE
Sbjct: 82   EKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLE 141

Query: 799  DTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDGPGQHPSQALLDVYTIGREIG 620
            DTIRTVEGYSDIIV+RHFESGAARRAA TA IPVINAGDGPGQHP+QALLDVYTI REIG
Sbjct: 142  DTIRTVEGYSDIIVMRHFESGAARRAATTACIPVINAGDGPGQHPTQALLDVYTIDREIG 201

Query: 619  KLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPDVVKMKDDIKDYLTSKGVEWE 440
            KLDGIKV LVGDLANGRTVRSLAYLL+KYQ+VKIYFV+PDVVKMKDDIKDYL S+GVEWE
Sbjct: 202  KLDGIKVALVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYLASRGVEWE 261

Query: 439  ESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDNKVLSVMQKHAIVMHPLP 260
            ES DLMEVAS+CDVVYQTRIQRERFGERIDLYE+ARGKYIVD+ VL+VMQKHA+VMHPLP
Sbjct: 262  ESADLMEVASKCDVVYQTRIQRERFGERIDLYEEARGKYIVDSDVLNVMQKHAVVMHPLP 321

Query: 259  RLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 143
            RLDEITVDVD DPRAAYFRQAKNGLYIRMALLKLLLVGW
Sbjct: 322  RLDEITVDVDVDPRAAYFRQAKNGLYIRMALLKLLLVGW 360


>ref|XP_002300331.1| predicted protein [Populus trichocarpa] gi|222847589|gb|EEE85136.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  561 bits (1446), Expect = e-157
 Identities = 283/335 (84%), Positives = 310/335 (92%)
 Frame = -3

Query: 1147 RTRCHALETEKVLNTDKAFSFSAGDKFQLQDILDAQQFDRDILNAIFKVARQMEDIEKNS 968
            R+R H+    ++L      SFSAG KFQL D+++AQQFDR+IL  IF+VA +ME +EKNS
Sbjct: 2    RSRIHS----QLLGIQNTPSFSAGKKFQLDDLIEAQQFDREILADIFEVAHEMEKVEKNS 57

Query: 967  PGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIR 788
            PGSQ+LKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIR
Sbjct: 58   PGSQVLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIR 117

Query: 787  TVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDGPGQHPSQALLDVYTIGREIGKLDG 608
            TVEGYSDIIV+RHFESGAA+RAA TA +PVINAGDGPGQHP+QALLDVYTI REIGKLDG
Sbjct: 118  TVEGYSDIIVMRHFESGAAKRAAATAEVPVINAGDGPGQHPTQALLDVYTIDREIGKLDG 177

Query: 607  IKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPDVVKMKDDIKDYLTSKGVEWEESTD 428
            IKV LVGDLANGRTVRSLAYLL+KYQ+VKIYFV+PDVVKMKDDIKDYLTSK VEWEES D
Sbjct: 178  IKVALVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYLTSKRVEWEESAD 237

Query: 427  LMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDNKVLSVMQKHAIVMHPLPRLDE 248
            LMEVAS+CDV+YQTRIQRERFG+RIDLYE+ARGKYIVD+ VL+VMQ HA+VMHPLPRLDE
Sbjct: 238  LMEVASKCDVLYQTRIQRERFGKRIDLYEEARGKYIVDHDVLNVMQNHAVVMHPLPRLDE 297

Query: 247  ITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 143
            ITVDVD+DPRAAYFRQAKNGLYIRMALLKLLLVGW
Sbjct: 298  ITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVGW 332


>ref|XP_002277415.2| PREDICTED: aspartate carbamoyltransferase 2, chloroplastic-like
            [Vitis vinifera]
          Length = 403

 Score =  559 bits (1441), Expect = e-157
 Identities = 280/315 (88%), Positives = 300/315 (95%)
 Frame = -3

Query: 1087 FSAGDKFQLQDILDAQQFDRDILNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPST 908
            FS G+KFQL D+++AQQFDR+ L+AIF+VAR+ME +EK SPGSQILKGYLMATLFYEPST
Sbjct: 89   FSVGNKFQLDDVIEAQQFDRETLSAIFEVAREMEKVEKKSPGSQILKGYLMATLFYEPST 148

Query: 907  RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAAR 728
            RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIV+RHFESGAAR
Sbjct: 149  RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAR 208

Query: 727  RAAVTAGIPVINAGDGPGQHPSQALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAY 548
            RAAVTA IP+INAGDGPGQHP+QALLDVYTI REIG+LD IKVGLVGDLANGRTVRSLAY
Sbjct: 209  RAAVTAEIPIINAGDGPGQHPTQALLDVYTIEREIGRLDRIKVGLVGDLANGRTVRSLAY 268

Query: 547  LLSKYQNVKIYFVAPDVVKMKDDIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRER 368
            LL+KYQ+VKIYFV+P+VVKMKDDIKDYLTSKGVEWEES DLMEVAS+CDVVYQTRIQRER
Sbjct: 269  LLAKYQDVKIYFVSPEVVKMKDDIKDYLTSKGVEWEESADLMEVASKCDVVYQTRIQRER 328

Query: 367  FGERIDLYEQARGKYIVDNKVLSVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNG 188
            FGER DLYE+ARGKYIVD  VL VMQKHA+VMHPLPRLDEITVDVD D RAAYFRQAKNG
Sbjct: 329  FGERADLYEEARGKYIVDRDVLGVMQKHAVVMHPLPRLDEITVDVDEDQRAAYFRQAKNG 388

Query: 187  LYIRMALLKLLLVGW 143
            LYIRMALLKLLLVGW
Sbjct: 389  LYIRMALLKLLLVGW 403


>sp|Q43064.1|PYRB3_PEA RecName: Full=Aspartate carbamoyltransferase 3, chloroplastic;
            AltName: Full=Aspartate transcarbamylase 3; Short=ATCase
            3; Flags: Precursor gi|609344|gb|AAB67857.1| aspartate
            carbamoyltransferase [Pisum sativum]
          Length = 391

 Score =  559 bits (1441), Expect = e-157
 Identities = 282/359 (78%), Positives = 322/359 (89%), Gaps = 5/359 (1%)
 Frame = -3

Query: 1204 SQVSMSSFSTLTSEKLLLSRTRC--HALETEKVLNT---DKAFSFSAGDKFQLQDILDAQ 1040
            S++S    + L S    +SR  C  +  + +K++ T   D    FS G KFQL D+++AQ
Sbjct: 33   SKISYVETNYLKSTCYPISRFLCINNLSKCDKMIKTRQRDGIHCFSEGQKFQLDDVIEAQ 92

Query: 1039 QFDRDILNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGE 860
            QFDRDILNAIF++AR ME+IE+NSP SQILKGYLMATLFYEPSTRTRLSFESAM+RLGGE
Sbjct: 93   QFDRDILNAIFEIARDMENIERNSPESQILKGYLMATLFYEPSTRTRLSFESAMRRLGGE 152

Query: 859  VLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDG 680
            VLTTENAREFSSAAKGETLEDTIRTVEGYSD+IV+RHFESGAARRAA  AGIP++NAGDG
Sbjct: 153  VLTTENAREFSSAAKGETLEDTIRTVEGYSDLIVLRHFESGAARRAAAIAGIPIVNAGDG 212

Query: 679  PGQHPSQALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPD 500
            PGQHPSQALLDVYTI REIGKLDGIKVGLVGDLANGRTVRSLAYLL+KY++VKIYFV+P+
Sbjct: 213  PGQHPSQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPE 272

Query: 499  VVKMKDDIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYI 320
            VVKMKDDIKDYLTSKGV+WEES+DL+EVASECDVVYQTRIQ+ERFGER+DLYE+ARGK+I
Sbjct: 273  VVKMKDDIKDYLTSKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFI 332

Query: 319  VDNKVLSVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 143
            V+  +L+ MQ+HA++MHPLPRLDEITVDVD+DPRAAYFRQAK GLYIRMALLKLLLVGW
Sbjct: 333  VNQNILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLLVGW 391


>sp|Q43087.1|PYRB2_PEA RecName: Full=Aspartate carbamoyltransferase 2, chloroplastic;
            AltName: Full=Aspartate transcarbamylase 2; Short=ATCase
            2; Flags: Precursor gi|495661|gb|AAA62444.1| aspartate
            transcarbamoylase [Pisum sativum]
          Length = 385

 Score =  556 bits (1434), Expect = e-156
 Identities = 281/354 (79%), Positives = 315/354 (88%)
 Frame = -3

Query: 1204 SQVSMSSFSTLTSEKLLLSRTRCHALETEKVLNTDKAFSFSAGDKFQLQDILDAQQFDRD 1025
            S++S    + L S    +SR  C     +K    D    FS G KFQL D+++AQQFDRD
Sbjct: 33   SKISYVETNYLKSTCYPISRFFC-INNLKKTRQRDGIHCFSEGQKFQLDDVVEAQQFDRD 91

Query: 1024 ILNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTE 845
            ILNAIF+VAR ME IE+NSP SQILKGYLMATLFYEPSTRTRLSFESAM+RLGGEVLTTE
Sbjct: 92   ILNAIFEVARDMEKIERNSPESQILKGYLMATLFYEPSTRTRLSFESAMRRLGGEVLTTE 151

Query: 844  NAREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDGPGQHP 665
            NAREFSSAAKGETLEDTIRTVEGYSD+IV+RHFESGAARRAA  AGIP++NAGDGPGQHP
Sbjct: 152  NAREFSSAAKGETLEDTIRTVEGYSDLIVLRHFESGAARRAATIAGIPIVNAGDGPGQHP 211

Query: 664  SQALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPDVVKMK 485
            SQALLDVYTI REIGKLDGIKVGLVGDLANGRTVRSL YLL+KY++VKIYFV+P+VVKMK
Sbjct: 212  SQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLTYLLAKYKDVKIYFVSPEVVKMK 271

Query: 484  DDIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDNKV 305
            DDIKDYLTSKGV+WEES+DL+EVASECDVVYQTRIQ+ERFGER+DLYE+ARGK+IV+  +
Sbjct: 272  DDIKDYLTSKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFIVNQNI 331

Query: 304  LSVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 143
            L+ MQ+HA++MHPLPRLDEITVDVD+DPRAAYFRQAK GLYIRMALLKLLLVGW
Sbjct: 332  LNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLLVGW 385