BLASTX nr result

ID: Coptis24_contig00006258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006258
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329365.1| predicted protein [Populus trichocarpa] gi|2...   146   9e-33
ref|XP_002517959.1| conserved hypothetical protein [Ricinus comm...   145   2e-32
ref|XP_002319915.1| predicted protein [Populus trichocarpa] gi|2...   136   9e-30
ref|XP_004154603.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   135   1e-29
ref|XP_004139934.1| PREDICTED: uncharacterized protein LOC101222...   135   1e-29

>ref|XP_002329365.1| predicted protein [Populus trichocarpa] gi|222870415|gb|EEF07546.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  146 bits (368), Expect = 9e-33
 Identities = 64/104 (61%), Positives = 81/104 (77%)
 Frame = -1

Query: 314 MHNERGSQDSNLKSFLDCITPIAPSRYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSF 135
           M  ++GS  SNL  FL C TP+ PS+ L  + I+NLNR+WHPWE++T+EYF L DLW+ +
Sbjct: 1   MFLDKGSMQSNLDCFLHCTTPLVPSQSLHKREIRNLNRLWHPWERDTVEYFTLGDLWNCY 60

Query: 134 GEWSAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITNYR 3
            EWSAYGAG  IALD+ ET+VQYYVPYLSAIQIFTS  P+ ++R
Sbjct: 61  DEWSAYGAGVPIALDNGETLVQYYVPYLSAIQIFTSNSPVNSFR 104


>ref|XP_002517959.1| conserved hypothetical protein [Ricinus communis]
           gi|223542941|gb|EEF44477.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score =  145 bits (365), Expect = 2e-32
 Identities = 63/101 (62%), Positives = 79/101 (78%)
 Frame = -1

Query: 305 ERGSQDSNLKSFLDCITPIAPSRYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSFGEW 126
           ++GS  SNL  FL C TP+ PS++LP   I+NLNR+WHPWE++T+EYF L DLW+ F EW
Sbjct: 4   DKGSAQSNLDCFLHCTTPLVPSQFLPKTEIRNLNRLWHPWERDTVEYFTLGDLWNCFDEW 63

Query: 125 SAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITNYR 3
           SAYGAG  IAL++ ET+VQYYVPYLSAIQIFTS   +  +R
Sbjct: 64  SAYGAGVPIALNNGETLVQYYVPYLSAIQIFTSNSSLNGFR 104


>ref|XP_002319915.1| predicted protein [Populus trichocarpa] gi|222858291|gb|EEE95838.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  136 bits (342), Expect = 9e-30
 Identities = 60/104 (57%), Positives = 77/104 (74%)
 Frame = -1

Query: 314 MHNERGSQDSNLKSFLDCITPIAPSRYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSF 135
           M  E+GS  SNL  FL C TP   S++L     +NLNR+WHPWE++T+EYF L DLW+ +
Sbjct: 1   MFLEKGSMQSNLDCFLHCTTPRVQSQFLAKSETRNLNRLWHPWERDTVEYFTLGDLWNFY 60

Query: 134 GEWSAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITNYR 3
            EWSAYGAG  I L+++ET+VQYYVPYLSAIQIFTS   + ++R
Sbjct: 61  DEWSAYGAGIPIVLNNDETLVQYYVPYLSAIQIFTSNSSVNSFR 104


>ref|XP_004154603.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101222318
           [Cucumis sativus]
          Length = 316

 Score =  135 bits (341), Expect = 1e-29
 Identities = 59/101 (58%), Positives = 76/101 (75%)
 Frame = -1

Query: 305 ERGSQDSNLKSFLDCITPIAPSRYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSFGEW 126
           ++ S  SNL  FL C TP+  S++LP   I+NLNR+WHPWE+E +EYF L DLW+ + EW
Sbjct: 4   DKVSMQSNLGCFLHCTTPVVNSQFLPKSEIRNLNRLWHPWEREKVEYFTLGDLWNCYDEW 63

Query: 125 SAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITNYR 3
           SAYGAG  IA+++ ET+VQYYVPYLSAIQIFTS   +  +R
Sbjct: 64  SAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTVNGFR 104


>ref|XP_004139934.1| PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus]
          Length = 316

 Score =  135 bits (341), Expect = 1e-29
 Identities = 59/101 (58%), Positives = 76/101 (75%)
 Frame = -1

Query: 305 ERGSQDSNLKSFLDCITPIAPSRYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSFGEW 126
           ++ S  SNL  FL C TP+  S++LP   I+NLNR+WHPWE+E +EYF L DLW+ + EW
Sbjct: 4   DKVSMQSNLGCFLHCTTPVVNSQFLPKSEIRNLNRLWHPWEREKVEYFTLGDLWNCYDEW 63

Query: 125 SAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITNYR 3
           SAYGAG  IA+++ ET+VQYYVPYLSAIQIFTS   +  +R
Sbjct: 64  SAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTVNGFR 104


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