BLASTX nr result

ID: Coptis24_contig00006253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006253
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93925.1| unknown [Populus trichocarpa]                          365   6e-99
ref|XP_002864814.1| leucine-rich repeat family protein [Arabidop...   357   2e-96
ref|XP_002270994.1| PREDICTED: LRR receptor-like serine/threonin...   355   1e-95
ref|XP_002511511.1| BRASSINOSTEROID INSENSITIVE 1-associated rec...   355   1e-95
ref|XP_002318612.1| predicted protein [Populus trichocarpa] gi|2...   355   1e-95

>gb|ABK93925.1| unknown [Populus trichocarpa]
          Length = 603

 Score =  365 bits (938), Expect = 6e-99
 Identities = 181/251 (72%), Positives = 202/251 (80%), Gaps = 2/251 (0%)
 Frame = -1

Query: 749 WVF--VFSVTLFITCSLALSPDGEALLEMKKTLNDSRSSLRSWNALDTSPCKWAGITCHP 576
           W+F  + SVTL  TCSLALS DG  LLE+  T NDSR+ L +W A D SPCKW GI+CHP
Sbjct: 8   WIFSVISSVTLLSTCSLALSEDGLTLLEIMSTWNDSRNILTNWQATDESPCKWTGISCHP 67

Query: 575 QDQRVLSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPSEITNCKELRAVYLRA 396
           QDQRV SINLPYM+LGGIISPSIGKLSRLQRLALHQNSLHGIIP EI+NC ELRA+YL A
Sbjct: 68  QDQRVTSINLPYMELGGIISPSIGKLSRLQRLALHQNSLHGIIPYEISNCTELRAIYLMA 127

Query: 395 NYLQGSIPAELGNLSFLTILDLSSNSLKGSIPPSIGNLTRLRFLNLSTNFFSGEIPTLGI 216
           NYLQG IPA++GNLS L ILDLSSN LKG+IP SIG LTRLR LNLSTN FSGEIP  G 
Sbjct: 128 NYLQGGIPADIGNLSHLNILDLSSNLLKGAIPSSIGRLTRLRHLNLSTNSFSGEIPDFGS 187

Query: 215 LGSFGNKSFVGNLDLCGVQIHRPCLGSLGFPAVLPHSNNDEAPGPTKRSSHYFNGFLIGA 36
           L +FGN SF+GN DLCG Q+H+PC  SLGFPAVLPH+ +DEA  P KRSSHY  G LIG 
Sbjct: 188 LSTFGNNSFIGNSDLCGRQVHKPCRTSLGFPAVLPHAASDEAAVPPKRSSHYIKGLLIGV 247

Query: 35  LSTMGVALVAL 3
           +STM + L+ L
Sbjct: 248 MSTMAITLLVL 258


>ref|XP_002864814.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297310649|gb|EFH41073.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 604

 Score =  357 bits (917), Expect = 2e-96
 Identities = 175/256 (68%), Positives = 205/256 (80%), Gaps = 4/256 (1%)
 Frame = -1

Query: 758 MGTWVFVFSV----TLFITCSLALSPDGEALLEMKKTLNDSRSSLRSWNALDTSPCKWAG 591
           MG  ++VFSV    TLF++CS AL+PDG ALLE+K   ND+R+SL +W   D SPC W G
Sbjct: 1   MGISIWVFSVISAATLFVSCSSALTPDGFALLELKSGFNDTRNSLENWKDSDESPCSWTG 60

Query: 590 ITCHPQDQRVLSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPSEITNCKELRA 411
           ++C+PQDQRV+SINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIP+EITNC ELRA
Sbjct: 61  VSCNPQDQRVVSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPNEITNCTELRA 120

Query: 410 VYLRANYLQGSIPAELGNLSFLTILDLSSNSLKGSIPPSIGNLTRLRFLNLSTNFFSGEI 231
           +YLRAN+LQG IP  LGNL+FLTILDLSSN+LKG IP SI  LTRLR LNLSTNFFSGEI
Sbjct: 121 MYLRANFLQGGIPPNLGNLTFLTILDLSSNTLKGPIPSSISRLTRLRSLNLSTNFFSGEI 180

Query: 230 PTLGILGSFGNKSFVGNLDLCGVQIHRPCLGSLGFPAVLPHSNNDEAPGPTKRSSHYFNG 51
           P +G+L  FG ++F GNLDLCG QI +PC  S+GFP VLPH+  D+   P KRSS    G
Sbjct: 181 PDIGVLSRFGVETFTGNLDLCGRQIRKPCRSSMGFPVVLPHAETDDESDPPKRSSRLIKG 240

Query: 50  FLIGALSTMGVALVAL 3
            LIGA+STM +A + +
Sbjct: 241 ILIGAMSTMALAFIVI 256


>ref|XP_002270994.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1
           [Vitis vinifera] gi|297734035|emb|CBI15282.3| unnamed
           protein product [Vitis vinifera]
          Length = 604

 Score =  355 bits (910), Expect = 1e-95
 Identities = 173/258 (67%), Positives = 205/258 (79%), Gaps = 4/258 (1%)
 Frame = -1

Query: 764 VRMGTWVFVFSV----TLFITCSLALSPDGEALLEMKKTLNDSRSSLRSWNALDTSPCKW 597
           ++MG W++ FS     TL   C LALS DG  LLE+K  LNDSR+ L +W   D  PCKW
Sbjct: 1   MKMGLWIWFFSAILGGTLLGPCCLALSEDGVTLLEIKSRLNDSRNFLGNWRDSDEFPCKW 60

Query: 596 AGITCHPQDQRVLSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPSEITNCKEL 417
            G++C+  D RV SINLPYMQLGGIISPSIGKL++LQRLALHQNSLHG IP+EI NC EL
Sbjct: 61  TGVSCYHHDHRVRSINLPYMQLGGIISPSIGKLNKLQRLALHQNSLHGSIPNEIANCAEL 120

Query: 416 RAVYLRANYLQGSIPAELGNLSFLTILDLSSNSLKGSIPPSIGNLTRLRFLNLSTNFFSG 237
           RA+YLRANYLQG IP++LGNLS+LTILD SSNSLKG+IP S+G L RLR+LNLSTNF SG
Sbjct: 121 RALYLRANYLQGGIPSDLGNLSYLTILDFSSNSLKGAIPSSLGRLKRLRYLNLSTNFLSG 180

Query: 236 EIPTLGILGSFGNKSFVGNLDLCGVQIHRPCLGSLGFPAVLPHSNNDEAPGPTKRSSHYF 57
           EIP +G+L +F NKSF+GNLDLCG Q+H+PC  SLGFPAVLPH+ +DEA  P KRS+H+ 
Sbjct: 181 EIPDVGVLSTFDNKSFIGNLDLCGQQVHKPCRTSLGFPAVLPHAESDEAAVPVKRSAHFT 240

Query: 56  NGFLIGALSTMGVALVAL 3
            G LIGA+STM + LV L
Sbjct: 241 KGVLIGAMSTMALVLVML 258


>ref|XP_002511511.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
           precursor, putative [Ricinus communis]
           gi|223550626|gb|EEF52113.1| BRASSINOSTEROID INSENSITIVE
           1-associated receptor kinase 1 precursor, putative
           [Ricinus communis]
          Length = 604

 Score =  355 bits (910), Expect = 1e-95
 Identities = 178/244 (72%), Positives = 197/244 (80%)
 Frame = -1

Query: 734 SVTLFITCSLALSPDGEALLEMKKTLNDSRSSLRSWNALDTSPCKWAGITCHPQDQRVLS 555
           S TLF T SLAL+ DG  LLE+K TLNDSR+ L +W A D SPCKW GI+CH  DQRV S
Sbjct: 22  SATLFSTSSLALTEDGLTLLEIKSTLNDSRNVLGNWQAADESPCKWTGISCHSHDQRVSS 81

Query: 554 INLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPSEITNCKELRAVYLRANYLQGSI 375
           INLPYMQLGGIIS SIGKLSRLQR+ALHQNSLHGIIP+EITNC ELRAVYLRANYLQG I
Sbjct: 82  INLPYMQLGGIISTSIGKLSRLQRIALHQNSLHGIIPNEITNCTELRAVYLRANYLQGGI 141

Query: 374 PAELGNLSFLTILDLSSNSLKGSIPPSIGNLTRLRFLNLSTNFFSGEIPTLGILGSFGNK 195
           P+++GNLS LTILD+SSN LKG+IP SIG LTRLR LNLSTNFFSGEIP  G L +FGN 
Sbjct: 142 PSDIGNLSHLTILDVSSNMLKGAIPSSIGRLTRLRHLNLSTNFFSGEIPDFGALSTFGNN 201

Query: 194 SFVGNLDLCGVQIHRPCLGSLGFPAVLPHSNNDEAPGPTKRSSHYFNGFLIGALSTMGVA 15
           SF+GNLDLCG Q+HRPC  S+GFPAVLPH     A  PTKRSSHY  G LIG ++TM + 
Sbjct: 202 SFIGNLDLCGRQVHRPCRTSMGFPAVLPH-----AAIPTKRSSHYIKGVLIGVMATMALT 256

Query: 14  LVAL 3
           L  L
Sbjct: 257 LAVL 260


>ref|XP_002318612.1| predicted protein [Populus trichocarpa] gi|222859285|gb|EEE96832.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score =  355 bits (910), Expect = 1e-95
 Identities = 179/251 (71%), Positives = 198/251 (78%), Gaps = 2/251 (0%)
 Frame = -1

Query: 749 WVF--VFSVTLFITCSLALSPDGEALLEMKKTLNDSRSSLRSWNALDTSPCKWAGITCHP 576
           W+F  + SVTL  TCSLALS DG  LLE+  T NDSR+ L +W A D SPCKW GI+CHP
Sbjct: 8   WIFSVISSVTLLSTCSLALSEDGLTLLEIMSTWNDSRNILTNWQATDESPCKWTGISCHP 67

Query: 575 QDQRVLSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPSEITNCKELRAVYLRA 396
           QDQRV SINLPYM+LGGIISPSIGKLSRLQRLALHQNSLHGIIP EI+NC ELRA+YL A
Sbjct: 68  QDQRVTSINLPYMELGGIISPSIGKLSRLQRLALHQNSLHGIIPYEISNCTELRAIYLMA 127

Query: 395 NYLQGSIPAELGNLSFLTILDLSSNSLKGSIPPSIGNLTRLRFLNLSTNFFSGEIPTLGI 216
           NYLQG IPA++GNLS L ILDLSSN LKG+IP SIG LTRLR LNLSTN FSGEIP  G 
Sbjct: 128 NYLQGGIPADIGNLSHLNILDLSSNLLKGAIPSSIGRLTRLRHLNLSTNSFSGEIPDFGS 187

Query: 215 LGSFGNKSFVGNLDLCGVQIHRPCLGSLGFPAVLPHSNNDEAPGPTKRSSHYFNGFLIGA 36
           L +FGN SF+GN DLCG Q+H+PC  SLGFPAVLPH     A  P KRSSHY  G LIG 
Sbjct: 188 LSTFGNNSFIGNSDLCGRQVHKPCRTSLGFPAVLPH-----AAIPPKRSSHYIKGLLIGV 242

Query: 35  LSTMGVALVAL 3
           +STM + L+ L
Sbjct: 243 MSTMAITLLVL 253


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