BLASTX nr result

ID: Coptis24_contig00006225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006225
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20063.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002273325.1| PREDICTED: uncharacterized protein LOC100257...    86   3e-15
emb|CBI23750.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002265509.1| PREDICTED: uncharacterized protein LOC100260...    83   2e-14
emb|CAN69646.1| hypothetical protein VITISV_022132 [Vitis vinifera]    82   3e-14

>emb|CBI20063.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
 Frame = -3

Query: 196 SWWESISKARTRIQVLSTILQTPSVS----SLADSDHPARSLLESQESYSTISSFLSNPL 29
           SWWESISKAR+RI VLSTIL +PS+S    SLADSD PARSLL+S ++Y  +SS LS P 
Sbjct: 51  SWWESISKARSRIHVLSTILPSPSLSLSLSSLADSDRPARSLLQSPDAYDALSSSLSCPR 110

Query: 28  SGSGQNCIC 2
           SGSG + +C
Sbjct: 111 SGSGSDPLC 119


>ref|XP_002273325.1| PREDICTED: uncharacterized protein LOC100257164 [Vitis vinifera]
          Length = 401

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
 Frame = -3

Query: 196 SWWESISKARTRIQVLSTILQTPSVS----SLADSDHPARSLLESQESYSTISSFLSNPL 29
           SWWESISKAR+RI VLSTIL +PS+S    SLADSD PARSLL+S ++Y  +SS LS P 
Sbjct: 34  SWWESISKARSRIHVLSTILPSPSLSLSLSSLADSDRPARSLLQSPDAYDALSSSLSCPR 93

Query: 28  SGSGQNCIC 2
           SGSG + +C
Sbjct: 94  SGSGSDPLC 102


>emb|CBI23750.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = -3

Query: 199 QSWWESISKARTRIQVLSTILQTPS--VSSLADSDHPARSLLESQESYSTISSFLSNPLS 26
           QSWWESISKAR RI  LS+IL +PS  +SSLADSD PARSLL+S + Y  + S L +P S
Sbjct: 622 QSWWESISKARARIHALSSILSSPSPSISSLADSDRPARSLLQSPDVYDAVCSSLFSPQS 681

Query: 25  GSGQNCIC 2
           GSG + IC
Sbjct: 682 GSGPDPIC 689


>ref|XP_002265509.1| PREDICTED: uncharacterized protein LOC100260050 [Vitis vinifera]
          Length = 400

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = -3

Query: 199 QSWWESISKARTRIQVLSTILQTPS--VSSLADSDHPARSLLESQESYSTISSFLSNPLS 26
           QSWWESISKAR RI  LS+IL +PS  +SSLADSD PARSLL+S + Y  + S L +P S
Sbjct: 33  QSWWESISKARARIHALSSILSSPSPSISSLADSDRPARSLLQSPDVYDAVCSSLFSPQS 92

Query: 25  GSGQNCIC 2
           GSG + IC
Sbjct: 93  GSGPDPIC 100


>emb|CAN69646.1| hypothetical protein VITISV_022132 [Vitis vinifera]
          Length = 527

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = -3

Query: 199 QSWWESISKARTRIQVLSTILQTPS--VSSLADSDHPARSLLESQESYSTISSFLSNPLS 26
           QSWWESISKAR RI  LS+IL +PS  +SSLADSD PARSLL+S + Y  + S L +P S
Sbjct: 33  QSWWESISKARARILALSSILSSPSPSISSLADSDRPARSLLQSPDVYDAVCSSLFSPQS 92

Query: 25  GSGQNCIC 2
           GSG + IC
Sbjct: 93  GSGPDPIC 100


Top