BLASTX nr result

ID: Coptis24_contig00006212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006212
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272015.1| PREDICTED: uncharacterized protein LOC100264...   135   5e-30
emb|CAN82642.1| hypothetical protein VITISV_024902 [Vitis vinifera]   130   1e-28
ref|XP_002512681.1| conserved hypothetical protein [Ricinus comm...   120   2e-25
ref|XP_004146046.1| PREDICTED: mediator-associated protein 2-lik...   118   4e-25
ref|XP_002299357.1| predicted protein [Populus trichocarpa] gi|2...   117   8e-25

>ref|XP_002272015.1| PREDICTED: uncharacterized protein LOC100264392 isoform 1 [Vitis
           vinifera] gi|225425288|ref|XP_002272062.1| PREDICTED:
           uncharacterized protein LOC100264392 isoform 2 [Vitis
           vinifera] gi|296085538|emb|CBI29270.3| unnamed protein
           product [Vitis vinifera]
          Length = 218

 Score =  135 bits (339), Expect = 5e-30
 Identities = 68/104 (65%), Positives = 81/104 (77%)
 Frame = +1

Query: 1   DPLLDISSMGYNKELWLIQWPVNQTPDFDGQEVTLKLQRNGSFASFESLSGKSYELVSFA 180
           D L+D+S M  +KELWLIQWPVNQ PDFDGQE++LKL ++G    FE  SGK Y +VSFA
Sbjct: 21  DSLVDLS-MTDSKELWLIQWPVNQHPDFDGQELSLKLHQDGQLGKFEGSSGKLYNVVSFA 79

Query: 181 SQVPDATVFQSLESDTKVVGKISRRVSLVHYAEPSELDKTSTNH 312
           SQ PDATVF S  S++K+VGKISRRVSLVHY EP EL+  S N+
Sbjct: 80  SQDPDATVFISSPSESKIVGKISRRVSLVHYPEPDELENQSANN 123


>emb|CAN82642.1| hypothetical protein VITISV_024902 [Vitis vinifera]
          Length = 340

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/104 (63%), Positives = 79/104 (75%)
 Frame = +1

Query: 1   DPLLDISSMGYNKELWLIQWPVNQTPDFDGQEVTLKLQRNGSFASFESLSGKSYELVSFA 180
           D L+D+S M  +KELWLIQWPVNQ PDFDGQE++LKL ++G    FE  SGK Y +VSFA
Sbjct: 88  DSLVDLS-MTDSKELWLIQWPVNQHPDFDGQELSLKLHQDGQLGKFEGSSGKLYNVVSFA 146

Query: 181 SQVPDATVFQSLESDTKVVGKISRRVSLVHYAEPSELDKTSTNH 312
            Q PDATVF S  S++K+VGKISR VSLVHY EP EL+  S N+
Sbjct: 147 XQDPDATVFISSPSESKIVGKISRCVSLVHYPEPDELENQSANN 190


>ref|XP_002512681.1| conserved hypothetical protein [Ricinus communis]
           gi|223548642|gb|EEF50133.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/99 (56%), Positives = 74/99 (74%)
 Frame = +1

Query: 1   DPLLDISSMGYNKELWLIQWPVNQTPDFDGQEVTLKLQRNGSFASFESLSGKSYELVSFA 180
           +PL+D+S      ELWLIQWP N+ PDF+G+E++L L  +G  A+FE  SGK Y++VS A
Sbjct: 16  EPLVDLSFTDSTSELWLIQWPHNELPDFNGKEISLNLYTDGCLATFEGSSGKVYDVVSSA 75

Query: 181 SQVPDATVFQSLESDTKVVGKISRRVSLVHYAEPSELDK 297
           +Q PDATVF S  S TK+VG +SRRVSLVH+ +P EL+K
Sbjct: 76  AQEPDATVFLSSASQTKIVGNVSRRVSLVHFPDPKELEK 114


>ref|XP_004146046.1| PREDICTED: mediator-associated protein 2-like isoform 1 [Cucumis
           sativus] gi|449456621|ref|XP_004146047.1| PREDICTED:
           mediator-associated protein 2-like isoform 2 [Cucumis
           sativus] gi|449507088|ref|XP_004162930.1| PREDICTED:
           mediator-associated protein 2-like isoform 1 [Cucumis
           sativus] gi|449507092|ref|XP_004162931.1| PREDICTED:
           mediator-associated protein 2-like isoform 2 [Cucumis
           sativus]
          Length = 246

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/99 (57%), Positives = 75/99 (75%)
 Frame = +1

Query: 7   LLDISSMGYNKELWLIQWPVNQTPDFDGQEVTLKLQRNGSFASFESLSGKSYELVSFASQ 186
           L DIS +  ++ELWLIQWP NQ PDFDGQE +L+L  +G   SF+  SGKSY+++S  +Q
Sbjct: 28  LTDIS-LTDSEELWLIQWPANQAPDFDGQEFSLQLHPDGHMGSFQGSSGKSYDVISCVAQ 86

Query: 187 VPDATVFQSLESDTKVVGKISRRVSLVHYAEPSELDKTS 303
            P+A+VF    SDT++VGKISRR+SLVHY EP EL+K +
Sbjct: 87  EPEASVFLPSSSDTRLVGKISRRISLVHYPEPEELEKAT 125


>ref|XP_002299357.1| predicted protein [Populus trichocarpa] gi|222846615|gb|EEE84162.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  117 bits (294), Expect = 8e-25
 Identities = 57/99 (57%), Positives = 78/99 (78%)
 Frame = +1

Query: 1   DPLLDISSMGYNKELWLIQWPVNQTPDFDGQEVTLKLQRNGSFASFESLSGKSYELVSFA 180
           +PL DIS +  + ELWLIQWP+N+ PDF+G+E++L L ++G   SFE+  GKS++LVS +
Sbjct: 22  EPLADIS-LSDSTELWLIQWPINELPDFNGKELSLSLDQDGCLGSFEASPGKSFDLVSCS 80

Query: 181 SQVPDATVFQSLESDTKVVGKISRRVSLVHYAEPSELDK 297
           +Q  DATVF S E +TK+VGKISR+VSLVHY +P EL+K
Sbjct: 81  AQGLDATVFLSSELETKIVGKISRQVSLVHYPDPKELEK 119


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