BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006206
         (1723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   412   e-112
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   379   e-102
gb|ABR16597.1| unknown [Picea sitchensis]                             376   e-102
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_003527134.1| PREDICTED: general transcription factor IIE ...   343   1e-91

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
            vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
            product [Vitis vinifera]
          Length = 475

 Score =  412 bits (1060), Expect = e-112
 Identities = 232/436 (53%), Positives = 277/436 (63%), Gaps = 6/436 (1%)
 Frame = +1

Query: 1    LVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKLHTHSYCCLDYAXXXXXXXXX 180
            LVTRDHR+ETAKGAK++SAA+AAT DG QT KEG+EKIKLHTHSYCC             
Sbjct: 81   LVTRDHRRETAKGAKIYSAAIAATGDGQQT-KEGDEKIKLHTHSYCC------------- 126

Query: 181  XXXXXXXXXXXXYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTA 360
                           LDYAQIYDVVRYRLHRM+KKLKDELE++NTVQEY+CP+C +RY A
Sbjct: 127  ---------------LDYAQIYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNA 171

Query: 361  FDALQLVSPDDESFRCESCRGELVAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
             DAL+L+S +DE F CESC GELVAES                                 
Sbjct: 172  LDALRLISMEDEYFHCESCNGELVAESDKLASQEIGDGDDNARRRRR------------- 218

Query: 541  XXXXXXXXXXXEKLKDILQKMEVQLKPLTDQLARVRDLPVPEYGSLQAWEXXXXXXXXXX 720
                       EKLKD+LQKMEVQLKPL DQL+RV+DLPVPE+GSLQAWE          
Sbjct: 219  -----------EKLKDMLQKMEVQLKPLMDQLSRVKDLPVPEFGSLQAWEARANAAGRAA 267

Query: 721  NGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEEDTKPEA--GAMKVVPPW 894
            NGD + ND S+SS G GF GTPMP+VGETKVEVA SGV V EED+K E    ++KV+PPW
Sbjct: 268  NGDSNANDSSKSSQGLGFGGTPMPFVGETKVEVAFSGVGVKEEDSKSEIANASLKVLPPW 327

Query: 895  LIKQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKDEKSIQDEYVKAYYXXXX 1074
            +IK+GMNLT EQRG +KQ+ +M +SSA  GSSDDKKS  ++ +EK++QDEYVKAYY    
Sbjct: 328  MIKEGMNLTKEQRGEIKQESKMGSSSAPLGSSDDKKSTTNKDEEKNLQDEYVKAYYAAIL 387

Query: 1075 XXXXXXXXXXXXXXXXXXXTNDISNEEIPSDRRVGMKSRREEN-GSDAVVWEEAPTSGRG 1251
                                   S     S+R+VGMKS+R+E+ G D   WEEAPT+G  
Sbjct: 388  KRQQEQEEAAKKQLELSNAHISNSVLGTSSNRQVGMKSKRDEDEGDDDFEWEEAPTAGNK 447

Query: 1252 S---KLYDLNVEANAS 1290
            S   K+ DLNV+A+AS
Sbjct: 448  SESFKVNDLNVQADAS 463


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
            sativus]
          Length = 475

 Score =  379 bits (974), Expect = e-102
 Identities = 213/433 (49%), Positives = 262/433 (60%), Gaps = 4/433 (0%)
 Frame = +1

Query: 1    LVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKLHTHSYCCLDYAXXXXXXXXX 180
            L+TRDHR+ETAKGAK+FSAAVAATADG    KEG+EKIK+HTHSYC LD           
Sbjct: 81   LITRDHRRETAKGAKIFSAAVAATADGPHHSKEGDEKIKMHTHSYCSLD----------- 129

Query: 181  XXXXXXXXXXXXYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTA 360
                             YAQ+YDVVRYR+HRM+KKLKDELE++NTVQEY+CP+C RRYTA
Sbjct: 130  -----------------YAQVYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTA 172

Query: 361  FDALQLVSPDDESFRCESCRGELVAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
             DAL+L+S +DE F CE+C GELVAES                                 
Sbjct: 173  LDALRLISFEDEYFHCENCNGELVAESDKLAAVQGVDGDDNVRKRRH------------- 219

Query: 541  XXXXXXXXXXXEKLKDILQKMEVQLKPLTDQLARVRDLPVPEYGSLQAWEXXXXXXXXXX 720
                       EKLKD+LQKME QLKPL +QL+RV+DLPVPE+G+L AWE          
Sbjct: 220  -----------EKLKDMLQKMEAQLKPLVEQLSRVKDLPVPEFGTLLAWEARASAAARGI 268

Query: 721  NGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEEDTKPEAG--AMKVVPPW 894
            NGD + NDPS+SS  QG+ GTPMP+VGETKVEVA SG      D K E+   ++KV+PPW
Sbjct: 269  NGDLNGNDPSKSS--QGYGGTPMPFVGETKVEVAFSGAEGTGVDAKSESENTSLKVLPPW 326

Query: 895  LIKQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKDEKSIQDEYVKAYYXXXX 1074
            +IK+GMNLT EQRG +K + + +  SA+   SDDKKS  ++ D+ +IQDEYVKAYY    
Sbjct: 327  MIKKGMNLTKEQRGEVKDESKTDAGSASAQFSDDKKSLANDDDKTNIQDEYVKAYYAAIL 386

Query: 1075 XXXXXXXXXXXXXXXXXXXTNDISNEEIPSDRRVGMKSRREENGSDAVVWEEAPTSGRGS 1254
                                   S     S R+VGMK++REE+  D + WEEAP  G  +
Sbjct: 387  KKQQELEEAAKGQQELSSTEVTESVANTNSSRQVGMKAKREEDEDDDIEWEEAPIGGNAN 446

Query: 1255 KLY--DLNVEANA 1287
            + Y  DLNVEA+A
Sbjct: 447  ENYKVDLNVEASA 459


>gb|ABR16597.1| unknown [Picea sitchensis]
          Length = 480

 Score =  376 bits (966), Expect = e-102
 Identities = 203/417 (48%), Positives = 262/417 (62%), Gaps = 2/417 (0%)
 Frame = +1

Query: 1    LVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKLHTHSYCCLDYAXXXXXXXXX 180
            L+TRDHR+ETAKGAK+F+AA+AATADG Q GKEGEEK+KLHTHSYCC             
Sbjct: 81   LITRDHRRETAKGAKVFNAAIAATADGQQNGKEGEEKLKLHTHSYCC------------- 127

Query: 181  XXXXXXXXXXXXYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTA 360
                           LDYAQ YDVVRYR+HRM+K+LKDELE+RNT+QEY+CP+C RRY+A
Sbjct: 128  ---------------LDYAQTYDVVRYRIHRMKKRLKDELEDRNTLQEYICPNCNRRYSA 172

Query: 361  FDALQLVSPDDESFRCESCRGELVAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
             DALQL+S  ++SF CE+C  ELVAES                                 
Sbjct: 173  LDALQLISFTEDSFHCENCNSELVAESDKLAAEEKGDGEDNGRRRRR------------- 219

Query: 541  XXXXXXXXXXXEKLKDILQKMEVQLKPLTDQLARVRDLPVPEYGSLQAWEXXXXXXXXXX 720
                       EKLK++L+KMEVQLKPL +QL RV+DLPVPE+GSL  WE          
Sbjct: 220  -----------EKLKELLEKMEVQLKPLMEQLTRVKDLPVPEFGSLLQWEARAIAAGRAV 268

Query: 721  NGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEEDTKPEAGAMKVVPPWLI 900
            +GD + N+ S+SS GQGF GTPMP++GETKVEVALSG+ V  ED+K +  ++KV+PPW+I
Sbjct: 269  SGDTNANESSKSSQGQGFGGTPMPFLGETKVEVALSGMEVKAEDSKEDVASLKVLPPWMI 328

Query: 901  KQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKD--EKSIQDEYVKAYYXXXX 1074
            +QGMNLT+EQRG +KQ+L+ +N S+  G + +KK   DEK   ++++Q+EY+KAYY    
Sbjct: 329  RQGMNLTNEQRGEVKQELKPDNISSFMGPAVEKKPTDDEKGNIQQNLQEEYLKAYYAAIF 388

Query: 1075 XXXXXXXXXXXXXXXXXXXTNDISNEEIPSDRRVGMKSRREENGSDAVVWEEAPTSG 1245
                                   + EE PS+RRVGMK++REE+  + V WEE  T+G
Sbjct: 389  KQQQEAEAAATAAAA-------AAAEEKPSERRVGMKAKREED-DEGVEWEEPRTTG 437


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  371 bits (952), Expect = e-100
 Identities = 221/437 (50%), Positives = 261/437 (59%), Gaps = 7/437 (1%)
 Frame = +1

Query: 1    LVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKLHTHSYCCLDYAXXXXXXXXX 180
            LVTRDHRKETAK AK+ +AAVA T DGH+T KEG++KIK+HTHSYCC             
Sbjct: 81   LVTRDHRKETAKAAKMHNAAVANTTDGHRT-KEGDDKIKMHTHSYCC------------- 126

Query: 181  XXXXXXXXXXXXYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTA 360
                           LDYAQIYDVVRYRLHRMRKKLKDELE++NTVQEY CP+C RRY A
Sbjct: 127  ---------------LDYAQIYDVVRYRLHRMRKKLKDELEDKNTVQEYTCPNCGRRYNA 171

Query: 361  FDALQLVSPDDESFRCESCRGELVAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
             DAL+L+S  DE F CE+C GELVAES                                 
Sbjct: 172  LDALRLMSLVDEYFHCENCDGELVAESDKLAAQEGGDGDDNARRRRR------------- 218

Query: 541  XXXXXXXXXXXEKLKDILQKMEVQLKPLTDQLARVRDLPVPEYGSLQAWEXXXXXXXXXX 720
                       EKLKD+LQKMEVQLKPL  QL+RV+DLPVPE+GSLQ W+          
Sbjct: 219  -----------EKLKDMLQKMEVQLKPLMAQLSRVKDLPVPEFGSLQEWQIHASAAGRAA 267

Query: 721  NGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEEDTKPEAGA--MKVVPPW 894
            NGD S NDPSRSS  QG+ GTPMP++GETKVEV+ SGV   +ED K E  +  +KV+PPW
Sbjct: 268  NGDSSYNDPSRSS--QGYGGTPMPFLGETKVEVSFSGVE-GKEDLKSETASTGLKVLPPW 324

Query: 895  LIKQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKDEKSIQDEYVKAYYXXXX 1074
            +IKQGMNLT EQRG +KQ  +M++SSA     DDKK  ++  D+  I+DEYVKAYY    
Sbjct: 325  MIKQGMNLTKEQRGEVKQGSKMDDSSAAAEPPDDKKISIENDDK--IKDEYVKAYYAALL 382

Query: 1075 XXXXXXXXXXXXXXXXXXXTNDISNEEIPSDRRVGMKSRREENG--SDAVVWEEAPTSG- 1245
                               +      +  SDR+VGMKS+REE+    D V WEEAP  G 
Sbjct: 383  QKQREAEESAEKQQELLQTSISNGFSKSSSDRQVGMKSKREEDDEPDDDVEWEEAPIGGN 442

Query: 1246 --RGSKLYDLNVEANAS 1290
               G K+ DLN EA AS
Sbjct: 443  TSEGFKVNDLNAEAPAS 459


>ref|XP_003527134.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
            max]
          Length = 469

 Score =  343 bits (879), Expect = 1e-91
 Identities = 199/434 (45%), Positives = 254/434 (58%), Gaps = 6/434 (1%)
 Frame = +1

Query: 1    LVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKLHTHSYCCLDYAXXXXXXXXX 180
            ++TR++R+ETAKGAK++SAA AAT D   TGKEGEEK+KLHTHSYCC             
Sbjct: 80   IITREYRRETAKGAKMYSAATAATVDVQLTGKEGEEKVKLHTHSYCC------------- 126

Query: 181  XXXXXXXXXXXXYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTA 360
                           LDYAQIYDVVRYR+HRM+K LKDEL+N+NT++EY+C  C +RY A
Sbjct: 127  ---------------LDYAQIYDVVRYRIHRMKKLLKDELDNKNTIEEYICTKCGKRYNA 171

Query: 361  FDALQLVSPDDESFRCESCRGELVAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
             DAL+LVS +D+ F CESC G+L  E+                                 
Sbjct: 172  LDALRLVSFEDDDFHCESCNGKLEVENDKFVAQEGGDGDENARRRRH------------- 218

Query: 541  XXXXXXXXXXXEKLKDILQKMEVQLKPLTDQLARVRDLPVPEYGSLQAWEXXXXXXXXXX 720
                       EKLKD+LQKME QLKPL DQL+RV+DLPVPE+GSL AWE          
Sbjct: 219  -----------EKLKDMLQKMEAQLKPLMDQLSRVKDLPVPEFGSLLAWEARASAMGRAA 267

Query: 721  NGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEEDTKPEAG--AMKVVPPW 894
            NGD S  D   S L  G++G PMPY G+TKV V  +G   + +D K E G  ++KV+PPW
Sbjct: 268  NGDMS-GDSKMSQL--GYNGAPMPYSGDTKVVVDFNGTEDI-KDVKSETGSASLKVLPPW 323

Query: 895  LIKQGMNLTSEQRGGLKQDLEMENSSATEGSS--DDKKSRVDEKDEKSIQDEYVKAYYXX 1068
            +IK GM LT EQRG  K++++M+ +S +  +   DDKKS VD  D+K+IQDEY+KAYY  
Sbjct: 324  MIKSGMVLTKEQRGEAKEEIKMDGTSTSSSAQYLDDKKSTVDHDDKKNIQDEYIKAYYAA 383

Query: 1069 XXXXXXXXXXXXXXXXXXXXXTNDISNEEIPSDRRVGMKSRREENGSDAVVWEEAPTSGR 1248
                                  ND S+    S+R+VGMKS+ EE+  D   WEEAP +G 
Sbjct: 384  LLKQQHELEAASKQELPNTLTANDPSSS--ASNRQVGMKSKLEED-DDGTEWEEAPVAGI 440

Query: 1249 GSKLY--DLNVEAN 1284
            G++ Y  DLNVEA+
Sbjct: 441  GNENYKVDLNVEAD 454