BLASTX nr result

ID: Coptis24_contig00006201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006201
         (1710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511381.1| U3 small nucleolar ribonucleoprotein protein...   383   e-104
ref|XP_003634246.1| PREDICTED: uncharacterized protein LOC100241...   373   e-101
ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
emb|CBI15009.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781...   369   1e-99

>ref|XP_002511381.1| U3 small nucleolar ribonucleoprotein protein mpp10, putative [Ricinus
            communis] gi|223550496|gb|EEF51983.1| U3 small nucleolar
            ribonucleoprotein protein mpp10, putative [Ricinus
            communis]
          Length = 533

 Score =  383 bits (983), Expect = e-104
 Identities = 197/298 (66%), Positives = 229/298 (76%), Gaps = 1/298 (0%)
 Frame = +3

Query: 402  KLGNARYEDFFGGKKKKSVKRQSNIHNKPEDEEQEDDKGDHKQTKESLSTHEKELQKLHS 581
            +LGNARYEDFFG KKK   KR+SN+     D+  ++D G   + +  LSTH+K+ +KL S
Sbjct: 229  ELGNARYEDFFGAKKKTDSKRKSNL-----DDGSDEDSGSEVEKEGDLSTHQKQREKLKS 283

Query: 582  KIEQMEKANLDPKAWTMQGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTASLEDLI 761
            +IEQMEKANL+PK WTM+GEVTA  RPKNSALEVDLDFEHNVRP PVITEEVTASLED+I
Sbjct: 284  EIEQMEKANLEPKTWTMRGEVTAADRPKNSALEVDLDFEHNVRPAPVITEEVTASLEDMI 343

Query: 762  KERILEGRFDDAERAASLPSKRLKELKEMDENKSKKGLAEIYEEEYVHQTGLGTAPLSSS 941
            K RI EGRFDD ++  SLPS   +E+KEMDENKSKKGLAE+YEEEYV +T    AP+S S
Sbjct: 344  KSRIAEGRFDDIQKLPSLPSTAPREVKEMDENKSKKGLAEVYEEEYVQKTNPAAAPISFS 403

Query: 942  DQLKKEAQLLFDKLCLKLDGLSHSHFRPKPVIEDMSIQTNVPALAMEEIAPVAVSDVAML 1121
            D+ KKEA +LF KLCLKLD LSH HF PKPVIEDMSIQ NVPALAMEEIAP+AVSD AML
Sbjct: 404  DEQKKEASILFKKLCLKLDALSHFHFAPKPVIEDMSIQVNVPALAMEEIAPMAVSDAAML 463

Query: 1122 APEEVFAGKGDIKEEAELTQEEXXXXXXXXXXXXXVEASKRLVNKVQGN-RLPDNSNG 1292
            APEEVF+GKGDIKEEAELTQ E              E  KR+  + + N  LPD+++G
Sbjct: 464  APEEVFSGKGDIKEEAELTQAERKRRRAKKKRKFKAEGVKRMAKRARDNTTLPDHNDG 521


>ref|XP_003634246.1| PREDICTED: uncharacterized protein LOC100241507 [Vitis vinifera]
          Length = 533

 Score =  373 bits (957), Expect = e-101
 Identities = 195/299 (65%), Positives = 226/299 (75%), Gaps = 2/299 (0%)
 Frame = +3

Query: 402  KLGNARYEDFFGGKKKKSVKRQ--SNIHNKPEDEEQEDDKGDHKQTKESLSTHEKELQKL 575
            +L + +YEDFFG K+K S K +    + +    +EQEDD+    + K  LSTHEKE + +
Sbjct: 232  ELDDIKYEDFFGPKRKVSKKSKLTDGLEDSDRSDEQEDDQATDNKNKV-LSTHEKERENV 290

Query: 576  HSKIEQMEKANLDPKAWTMQGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTASLED 755
             +KIE+ME+ANL+ K WTMQGEVTA KRPKNSALEVDLDFEHNVRP PVITEEVTASLED
Sbjct: 291  RAKIEEMERANLESKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTASLED 350

Query: 756  LIKERILEGRFDDAERAASLPSKRLKELKEMDENKSKKGLAEIYEEEYVHQTGLGTAPLS 935
            LI++RILEGRFDD ++A  LPSK  KE+KEMDENKSKKGLAEIYEEE+V +T L +APLS
Sbjct: 351  LIQKRILEGRFDDVQKAPRLPSKAPKEVKEMDENKSKKGLAEIYEEEFVQKTNLDSAPLS 410

Query: 936  SSDQLKKEAQLLFDKLCLKLDGLSHSHFRPKPVIEDMSIQTNVPALAMEEIAPVAVSDVA 1115
             SD+ +KEA +LF KLCLKLD LSH HF PKPVI+DMSIQTNVPALAMEEIAP+AVSD A
Sbjct: 411  FSDEQRKEASMLFKKLCLKLDALSHFHFTPKPVIDDMSIQTNVPALAMEEIAPLAVSDAA 470

Query: 1116 MLAPEEVFAGKGDIKEEAELTQEEXXXXXXXXXXXXXVEASKRLVNKVQGNRLPDNSNG 1292
            MLAPEEVF GKGDIKEEAELTQ E                +KR   K Q   L +N  G
Sbjct: 471  MLAPEEVFEGKGDIKEEAELTQAERKRRRANKKRKFKANTTKRAAKKAQDGTLQNNKEG 529


>ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|222868605|gb|EEF05736.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  371 bits (952), Expect = e-100
 Identities = 192/295 (65%), Positives = 226/295 (76%), Gaps = 2/295 (0%)
 Frame = +3

Query: 414  ARYEDFFGGKKKKSVKRQSNIHNKPEDEEQEDDKGDH--KQTKESLSTHEKELQKLHSKI 587
            ARYEDFFGGKK+K +K+++      ED   +D+  D    + K  LSTHEK+LQKL S+I
Sbjct: 251  ARYEDFFGGKKRKILKKKTK-----EDSSSDDELDDEALNERKGRLSTHEKQLQKLQSEI 305

Query: 588  EQMEKANLDPKAWTMQGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTASLEDLIKE 767
            EQMEK+NL+PK WTMQGEVTA  RPKNSALEVDLDFEHN+RP PVITEEVTA+LED+IK 
Sbjct: 306  EQMEKSNLEPKTWTMQGEVTAASRPKNSALEVDLDFEHNMRPAPVITEEVTATLEDMIKS 365

Query: 768  RILEGRFDDAERAASLPSKRLKELKEMDENKSKKGLAEIYEEEYVHQTGLGTAPLSSSDQ 947
            RI+EGRFDD  +A SL SK  +ELKE+DENKSKKGLA++YEEEYV +T    APLS SD+
Sbjct: 366  RIIEGRFDDIRKAPSLHSKAPRELKELDENKSKKGLADVYEEEYVQKTNPAAAPLSFSDE 425

Query: 948  LKKEAQLLFDKLCLKLDGLSHSHFRPKPVIEDMSIQTNVPALAMEEIAPVAVSDVAMLAP 1127
             KKEA +LF KLCLKLD LSH HF PKPVIEDMSIQ NVPALAMEEIAP+AVSD AMLAP
Sbjct: 426  QKKEASVLFKKLCLKLDALSHFHFAPKPVIEDMSIQANVPALAMEEIAPMAVSDAAMLAP 485

Query: 1128 EEVFAGKGDIKEEAELTQEEXXXXXXXXXXXXXVEASKRLVNKVQGNRLPDNSNG 1292
            EE+F+GKG+IKEEAELT+ E              E+ KR+  K Q N   ++ +G
Sbjct: 486  EEIFSGKGNIKEEAELTKAERKRRRANKKRKFKAESVKRMPKKAQENTTLNHDDG 540


>emb|CBI15009.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  370 bits (951), Expect = e-100
 Identities = 194/293 (66%), Positives = 222/293 (75%), Gaps = 2/293 (0%)
 Frame = +3

Query: 420  YEDFFGGKKKKSVKRQ--SNIHNKPEDEEQEDDKGDHKQTKESLSTHEKELQKLHSKIEQ 593
            YEDFFG K+K S K +    + +    +EQEDD+    + K  LSTHEKE + + +KIE+
Sbjct: 175  YEDFFGPKRKVSKKSKLTDGLEDSDRSDEQEDDQATDNKNKV-LSTHEKERENVRAKIEE 233

Query: 594  MEKANLDPKAWTMQGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTASLEDLIKERI 773
            ME+ANL+ K WTMQGEVTA KRPKNSALEVDLDFEHNVRP PVITEEVTASLEDLI++RI
Sbjct: 234  MERANLESKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTASLEDLIQKRI 293

Query: 774  LEGRFDDAERAASLPSKRLKELKEMDENKSKKGLAEIYEEEYVHQTGLGTAPLSSSDQLK 953
            LEGRFDD ++A  LPSK  KE+KEMDENKSKKGLAEIYEEE+V +T L +APLS SD+ +
Sbjct: 294  LEGRFDDVQKAPRLPSKAPKEVKEMDENKSKKGLAEIYEEEFVQKTNLDSAPLSFSDEQR 353

Query: 954  KEAQLLFDKLCLKLDGLSHSHFRPKPVIEDMSIQTNVPALAMEEIAPVAVSDVAMLAPEE 1133
            KEA +LF KLCLKLD LSH HF PKPVI+DMSIQTNVPALAMEEIAP+AVSD AMLAPEE
Sbjct: 354  KEASMLFKKLCLKLDALSHFHFTPKPVIDDMSIQTNVPALAMEEIAPLAVSDAAMLAPEE 413

Query: 1134 VFAGKGDIKEEAELTQEEXXXXXXXXXXXXXVEASKRLVNKVQGNRLPDNSNG 1292
            VF GKGDIKEEAELTQ E                +KR   K Q   L +N  G
Sbjct: 414  VFEGKGDIKEEAELTQAERKRRRANKKRKFKANTTKRAAKKAQDGTLQNNKEG 466


>ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781093 [Glycine max]
          Length = 516

 Score =  369 bits (947), Expect = 1e-99
 Identities = 188/294 (63%), Positives = 222/294 (75%)
 Frame = +3

Query: 411  NARYEDFFGGKKKKSVKRQSNIHNKPEDEEQEDDKGDHKQTKESLSTHEKELQKLHSKIE 590
            +ARYEDFFGGKK++  KR++ +  + E  + EDD    KQTK + S HEK+L+K+ SKIE
Sbjct: 223  SARYEDFFGGKKERGSKRKAQVLQESEYSDDEDDMEFDKQTKGTASAHEKQLEKIQSKIE 282

Query: 591  QMEKANLDPKAWTMQGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTASLEDLIKER 770
             MEKAN+DPK WTMQGEVTA KRPKNSALEVDLDFEHNVRP PVITEEVTAS+ED+IK+R
Sbjct: 283  LMEKANIDPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDIIKKR 342

Query: 771  ILEGRFDDAERAASLPSKRLKELKEMDENKSKKGLAEIYEEEYVHQTGLGTAPLSSSDQL 950
            I+EG F+D +R   LPSK  +E+KE+D+NKSK+GLAE+YE+EYV +T   +APLS  D+ 
Sbjct: 343  IIEGHFNDVQRVPKLPSKAPREVKELDDNKSKQGLAELYEQEYVQKTDPTSAPLSFKDEQ 402

Query: 951  KKEAQLLFDKLCLKLDGLSHSHFRPKPVIEDMSIQTNVPALAMEEIAPVAVSDVAMLAPE 1130
            K EA +LF +LCLKLD LSH +F PKPVIEDMSIQ NVPALAMEEIAPVAVSD AMLAPE
Sbjct: 403  KNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPE 462

Query: 1131 EVFAGKGDIKEEAELTQEEXXXXXXXXXXXXXVEASKRLVNKVQGNRLPDNSNG 1292
            EVF GKGDIKEE ELT+ E              EA KR   K Q   +    NG
Sbjct: 463  EVFDGKGDIKEETELTKAERKTRRANKKRKFKAEAVKRTNKKAQEGVIRSKVNG 516


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