BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006197
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]        271   2e-70
ref|XP_002533868.1| protein with unknown function [Ricinus commu...   270   2e-70
ref|XP_004164059.1| PREDICTED: protein DGCR14 homolog, partial [...   266   3e-69
ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s...   266   3e-69
ref|XP_002882551.1| hypothetical protein ARALYDRAFT_478116 [Arab...   256   5e-66

>ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]
          Length = 504

 Score =  271 bits (692), Expect = 2e-70
 Identities = 141/265 (53%), Positives = 175/265 (66%), Gaps = 4/265 (1%)
 Frame = +2

Query: 32  MLLSPGNSPRHXXXXXXXXXXXXXXXXX----IFLPTSKKRQAHVLDEETYGDAMGYIIE 199
           MLLSPG+SPRH                     + +  + +++  VLDE+TY  A+  I+E
Sbjct: 1   MLLSPGHSPRHLSSPSPSLSEKPQQNRNSSSVLNVSANPRKEVTVLDEDTYVAAIEKIVE 60

Query: 200 RDFFPDLPKLRDRLDWLVAVKTGDPMIIKDAQLKILERRGGKTLRTNAEAHSKTPGTQSN 379
           RDFFPD+PKLRDRL+WL AV++GDP+ I+D QLKI +RRG K L   AE       T  +
Sbjct: 61  RDFFPDIPKLRDRLEWLEAVRSGDPLRIRDVQLKIRDRRGRKALNC-AETERNRSRTPGS 119

Query: 380 YVNLLTTPFDFDKTPQXXXXXXXXXXXXXXXXXXXXSYSLDEFCRRYTSEDNDSFSKILE 559
                 TPF+ DKTP                       SLD+F RRYTSEDN+SFSKILE
Sbjct: 120 TFTRTFTPFELDKTPDVSNRESSVAGESADDDSEALPLSLDQFFRRYTSEDNESFSKILE 179

Query: 560 KVNRKKRERYGFLIEGEKVEVKLLEDIKKERVTDGYGTSDQPLSTLEGWKYTAKNLLMYN 739
           K NRK++ERY FL EGEK +VKL+ED+K++R+TDGYGTSDQP STL+GWKYTAKNLLMY+
Sbjct: 180 KANRKRKERYEFLTEGEKEDVKLIEDVKRDRITDGYGTSDQPPSTLDGWKYTAKNLLMYH 239

Query: 740 PVDNGEVALTEEEKAERIKGLTKEI 814
           P D GE  LTEEE+AER+ GLTKE+
Sbjct: 240 PADRGEAPLTEEERAERLNGLTKEV 264


>ref|XP_002533868.1| protein with unknown function [Ricinus communis]
           gi|223526190|gb|EEF28518.1| protein with unknown
           function [Ricinus communis]
          Length = 519

 Score =  270 bits (691), Expect = 2e-70
 Identities = 154/284 (54%), Positives = 190/284 (66%), Gaps = 23/284 (8%)
 Frame = +2

Query: 32  MLLSPGNSPRH-------XXXXXXXXXXXXXXXXXIFLPTSKKRQAHVLDEETYGDAMGY 190
           MLLSPG+SPRH                           P++ +++A VLDE+TY  A+  
Sbjct: 1   MLLSPGHSPRHLSSPSPGPSTNSEIALQTSNKSTITTTPSNHRKRARVLDEDTYVAAIEK 60

Query: 191 IIERDFFPDLPKLRDRLDWLVAVKTGDPMIIKDAQLKILERRGGKTLRTNAE-------- 346
           IIERDFFPD+ KLRDRLDWL AVKTGDP+ I+DAQLKI+ERRG +   +N++        
Sbjct: 61  IIERDFFPDISKLRDRLDWLEAVKTGDPIQIRDAQLKIIERRGKRVNSSNSDGSTQTRNR 120

Query: 347 AHSKTPGTQSNYVNLLTTPFD-FD-----KTPQXXXXXXXXXXXXXXXXXXXXS--YSLD 502
           + ++TPG  S ++  L  PFD FD     KTP+                        SLD
Sbjct: 121 SQTQTPG--STFMRNL-NPFDEFDIINSNKTPRMDMFGDKEKSDNNDEADDAVDEFLSLD 177

Query: 503 EFCRRYTSEDNDSFSKILEKVNRKKRERYGFLIEGEKVEVKLLEDIKKERVTDGYGTSDQ 682
           EF RRYTSEDN+SFSKILEKVNRK++E YG L+EGEK +VKL+ED+K++R+TDGYGTSDQ
Sbjct: 178 EFFRRYTSEDNESFSKILEKVNRKRKETYGHLLEGEKEDVKLIEDVKRDRITDGYGTSDQ 237

Query: 683 PLSTLEGWKYTAKNLLMYNPVDNGEVALTEEEKAERIKGLTKEI 814
           P+STLEGW YTAKNLLMY+P D GEVALTEEE+A R+KGLTKEI
Sbjct: 238 PVSTLEGWNYTAKNLLMYHPADRGEVALTEEERAVRLKGLTKEI 281


>ref|XP_004164059.1| PREDICTED: protein DGCR14 homolog, partial [Cucumis sativus]
          Length = 410

 Score =  266 bits (681), Expect = 3e-69
 Identities = 149/273 (54%), Positives = 183/273 (67%), Gaps = 12/273 (4%)
 Frame = +2

Query: 32  MLLSPGNSPRHXXXXXXXXXXXXXXXXX-----IFLPTSKKRQAHVLDEETYGDAMGYII 196
           MLLSPG+SPRH                      I  P S ++   VLDE++Y +A+  II
Sbjct: 1   MLLSPGHSPRHISSPSPSTVSENAIQTLQSSSSITTPQSSRKHPKVLDEDSYVEAIEKII 60

Query: 197 ERDFFPDLPKLRDRLDWLVAVKTGDPMIIKDAQLKILERRGGKTLRTNAEAHSKTPGTQS 376
           ERD+FPD+ KLRDRLDWL A+K+ DP++I+DAQLKI+ERRG K  R N +  S+TPG  S
Sbjct: 61  ERDYFPDISKLRDRLDWLEAIKSADPILIRDAQLKIMERRGQKVKRLNPDGKSQTPG--S 118

Query: 377 NYVNLLTTPFD-FD-KTPQXXXXXXXXXXXXXXXXXXXX-----SYSLDEFCRRYTSEDN 535
            ++   T PFD F+ KTP+                         S SLDEF R+YTSEDN
Sbjct: 119 TFMRSFT-PFDEFEGKTPKTPGFGGSGVVGVTEEGGSDGKVVDESLSLDEFFRQYTSEDN 177

Query: 536 DSFSKILEKVNRKKRERYGFLIEGEKVEVKLLEDIKKERVTDGYGTSDQPLSTLEGWKYT 715
            SFSKILEK NRK++ERY +L EGEK +VK +ED+K++R+TDGYGTSDQP STLEGWKYT
Sbjct: 178 FSFSKILEKDNRKRKERYAYLTEGEKDDVKSIEDVKRDRITDGYGTSDQPPSTLEGWKYT 237

Query: 716 AKNLLMYNPVDNGEVALTEEEKAERIKGLTKEI 814
           AKNLLMY+P D GE  LTEEE+A R+KGLTKEI
Sbjct: 238 AKNLLMYHPSDRGEAPLTEEERAVRLKGLTKEI 270


>ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus]
          Length = 509

 Score =  266 bits (681), Expect = 3e-69
 Identities = 149/273 (54%), Positives = 183/273 (67%), Gaps = 12/273 (4%)
 Frame = +2

Query: 32  MLLSPGNSPRHXXXXXXXXXXXXXXXXX-----IFLPTSKKRQAHVLDEETYGDAMGYII 196
           MLLSPG+SPRH                      I  P S ++   VLDE++Y +A+  II
Sbjct: 1   MLLSPGHSPRHISSPSPSTVSENAIQTLQSSSSITTPQSSRKHPKVLDEDSYVEAIEKII 60

Query: 197 ERDFFPDLPKLRDRLDWLVAVKTGDPMIIKDAQLKILERRGGKTLRTNAEAHSKTPGTQS 376
           ERD+FPD+ KLRDRLDWL A+K+ DP++I+DAQLKI+ERRG K  R N +  S+TPG  S
Sbjct: 61  ERDYFPDISKLRDRLDWLEAIKSADPILIRDAQLKIMERRGQKVKRLNPDGKSQTPG--S 118

Query: 377 NYVNLLTTPFD-FD-KTPQXXXXXXXXXXXXXXXXXXXX-----SYSLDEFCRRYTSEDN 535
            ++   T PFD F+ KTP+                         S SLDEF R+YTSEDN
Sbjct: 119 TFMRSFT-PFDEFEGKTPKTPGFGGSGVVGVTEEGGSDGKVVDESLSLDEFFRQYTSEDN 177

Query: 536 DSFSKILEKVNRKKRERYGFLIEGEKVEVKLLEDIKKERVTDGYGTSDQPLSTLEGWKYT 715
            SFSKILEK NRK++ERY +L EGEK +VK +ED+K++R+TDGYGTSDQP STLEGWKYT
Sbjct: 178 FSFSKILEKDNRKRKERYAYLTEGEKDDVKSIEDVKRDRITDGYGTSDQPPSTLEGWKYT 237

Query: 716 AKNLLMYNPVDNGEVALTEEEKAERIKGLTKEI 814
           AKNLLMY+P D GE  LTEEE+A R+KGLTKEI
Sbjct: 238 AKNLLMYHPSDRGEAPLTEEERAVRLKGLTKEI 270


>ref|XP_002882551.1| hypothetical protein ARALYDRAFT_478116 [Arabidopsis lyrata subsp.
           lyrata] gi|297328391|gb|EFH58810.1| hypothetical protein
           ARALYDRAFT_478116 [Arabidopsis lyrata subsp. lyrata]
          Length = 503

 Score =  256 bits (653), Expect = 5e-66
 Identities = 141/273 (51%), Positives = 174/273 (63%), Gaps = 12/273 (4%)
 Frame = +2

Query: 32  MLLSPGNSPRHXXXXXXXXXXXXXXXXXI------FLPTSKKRQAHVLDEETYGDAMGYI 193
           M LSPG+SPR                          +P + +++  VLDE+ Y +A+  I
Sbjct: 1   MFLSPGHSPRQISSPSPSSYSDDTIRSTPRSSFSEIIPRNPRKRMRVLDEDAYVEAIEKI 60

Query: 194 IERDFFPDLPKLRDRLDWLVAVKTGDPMIIKDAQLKILERRGGKTLRTNAEAHSKTPGTQ 373
           IERD+FPD+ KLRDRLDW+ AVKT DP+ I+DAQLKI+ERRG K      +   KT    
Sbjct: 61  IERDYFPDITKLRDRLDWIQAVKTRDPIQIRDAQLKIIERRGKKANHHVGDTEGKTQTPG 120

Query: 374 SNYVNLLTTPFDFD-KTPQXXXXXXXXXXXXXXXXXXXX-----SYSLDEFCRRYTSEDN 535
           S ++   T   +FD KTP+                         + SLDEF RRYTSEDN
Sbjct: 121 STFLRNFTPLDEFDGKTPRTPGVSGREFHGGEVDADAGDGDIDLNLSLDEFFRRYTSEDN 180

Query: 536 DSFSKILEKVNRKKRERYGFLIEGEKVEVKLLEDIKKERVTDGYGTSDQPLSTLEGWKYT 715
           DSFSKILEKVNRKK+E+YGFL+EGEK + K +ED+K++R+TDGYGTSDQP STLEGWKYT
Sbjct: 181 DSFSKILEKVNRKKKEKYGFLLEGEKEDGKSIEDLKRDRITDGYGTSDQPPSTLEGWKYT 240

Query: 716 AKNLLMYNPVDNGEVALTEEEKAERIKGLTKEI 814
           AKNLLMY+P D GE  LTE E+A R+ GLTKEI
Sbjct: 241 AKNLLMYHPADRGEAPLTEAERAVRLLGLTKEI 273