BLASTX nr result

ID: Coptis24_contig00006194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006194
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51636.1|AC018908_2 unknown protein; 69131-60853 [Arabidops...    45   4e-06
ref|XP_003547536.1| PREDICTED: uncharacterized protein LOC100812...    45   4e-06
ref|XP_003593019.1| Membralin [Medicago truncatula] gi|355482067...    45   4e-06
emb|CAN83928.1| hypothetical protein VITISV_036910 [Vitis vinifera]    45   4e-06
ref|XP_002529547.1| Membralin, putative [Ricinus communis] gi|22...    45   4e-06

>gb|AAG51636.1|AC018908_2 unknown protein; 69131-60853 [Arabidopsis thaliana]
          Length = 974

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -2

Query: 484 IMISILFFLFEFYDDQLLAFMVV 416
           IMI ILFFLFEFYDDQLLAFMV+
Sbjct: 727 IMIGILFFLFEFYDDQLLAFMVL 749



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486
           KCGVL+                LRETQTRMLKFT
Sbjct: 664 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 697


>ref|XP_003547536.1| PREDICTED: uncharacterized protein LOC100812436 [Glycine max]
          Length = 680

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -2

Query: 484 IMISILFFLFEFYDDQLLAFMVV 416
           IMI ILFFLFEFYDDQLLAFMV+
Sbjct: 421 IMIGILFFLFEFYDDQLLAFMVL 443



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486
           KCGVL+                LRETQTRMLKFT
Sbjct: 358 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 391


>ref|XP_003593019.1| Membralin [Medicago truncatula] gi|355482067|gb|AES63270.1|
           Membralin [Medicago truncatula]
          Length = 675

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -2

Query: 484 IMISILFFLFEFYDDQLLAFMVV 416
           IMI ILFFLFEFYDDQLLAFMV+
Sbjct: 421 IMIGILFFLFEFYDDQLLAFMVL 443



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486
           KCGVL+                LRETQTRMLKFT
Sbjct: 358 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 391


>emb|CAN83928.1| hypothetical protein VITISV_036910 [Vitis vinifera]
          Length = 673

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -2

Query: 484 IMISILFFLFEFYDDQLLAFMVV 416
           IMI ILFFLFEFYDDQLLAFMV+
Sbjct: 420 IMIGILFFLFEFYDDQLLAFMVL 442



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486
           KCGVL+                LRETQTRMLKFT
Sbjct: 357 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 390


>ref|XP_002529547.1| Membralin, putative [Ricinus communis] gi|223530995|gb|EEF32850.1|
           Membralin, putative [Ricinus communis]
          Length = 672

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -2

Query: 484 IMISILFFLFEFYDDQLLAFMVV 416
           IMI ILFFLFEFYDDQLLAFMV+
Sbjct: 420 IMIGILFFLFEFYDDQLLAFMVL 442



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486
           KCGVL+                LRETQTRMLKFT
Sbjct: 357 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 390


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