BLASTX nr result
ID: Coptis24_contig00006194
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006194 (587 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG51636.1|AC018908_2 unknown protein; 69131-60853 [Arabidops... 45 4e-06 ref|XP_003547536.1| PREDICTED: uncharacterized protein LOC100812... 45 4e-06 ref|XP_003593019.1| Membralin [Medicago truncatula] gi|355482067... 45 4e-06 emb|CAN83928.1| hypothetical protein VITISV_036910 [Vitis vinifera] 45 4e-06 ref|XP_002529547.1| Membralin, putative [Ricinus communis] gi|22... 45 4e-06 >gb|AAG51636.1|AC018908_2 unknown protein; 69131-60853 [Arabidopsis thaliana] Length = 974 Score = 45.4 bits (106), Expect(2) = 4e-06 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = -2 Query: 484 IMISILFFLFEFYDDQLLAFMVV 416 IMI ILFFLFEFYDDQLLAFMV+ Sbjct: 727 IMIGILFFLFEFYDDQLLAFMVL 749 Score = 30.4 bits (67), Expect(2) = 4e-06 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = -1 Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486 KCGVL+ LRETQTRMLKFT Sbjct: 664 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 697 >ref|XP_003547536.1| PREDICTED: uncharacterized protein LOC100812436 [Glycine max] Length = 680 Score = 45.4 bits (106), Expect(2) = 4e-06 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = -2 Query: 484 IMISILFFLFEFYDDQLLAFMVV 416 IMI ILFFLFEFYDDQLLAFMV+ Sbjct: 421 IMIGILFFLFEFYDDQLLAFMVL 443 Score = 30.4 bits (67), Expect(2) = 4e-06 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = -1 Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486 KCGVL+ LRETQTRMLKFT Sbjct: 358 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 391 >ref|XP_003593019.1| Membralin [Medicago truncatula] gi|355482067|gb|AES63270.1| Membralin [Medicago truncatula] Length = 675 Score = 45.4 bits (106), Expect(2) = 4e-06 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = -2 Query: 484 IMISILFFLFEFYDDQLLAFMVV 416 IMI ILFFLFEFYDDQLLAFMV+ Sbjct: 421 IMIGILFFLFEFYDDQLLAFMVL 443 Score = 30.4 bits (67), Expect(2) = 4e-06 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = -1 Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486 KCGVL+ LRETQTRMLKFT Sbjct: 358 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 391 >emb|CAN83928.1| hypothetical protein VITISV_036910 [Vitis vinifera] Length = 673 Score = 45.4 bits (106), Expect(2) = 4e-06 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = -2 Query: 484 IMISILFFLFEFYDDQLLAFMVV 416 IMI ILFFLFEFYDDQLLAFMV+ Sbjct: 420 IMIGILFFLFEFYDDQLLAFMVL 442 Score = 30.4 bits (67), Expect(2) = 4e-06 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = -1 Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486 KCGVL+ LRETQTRMLKFT Sbjct: 357 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 390 >ref|XP_002529547.1| Membralin, putative [Ricinus communis] gi|223530995|gb|EEF32850.1| Membralin, putative [Ricinus communis] Length = 672 Score = 45.4 bits (106), Expect(2) = 4e-06 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = -2 Query: 484 IMISILFFLFEFYDDQLLAFMVV 416 IMI ILFFLFEFYDDQLLAFMV+ Sbjct: 420 IMIGILFFLFEFYDDQLLAFMVL 442 Score = 30.4 bits (67), Expect(2) = 4e-06 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = -1 Query: 587 KCGVLIXXXXXXXXXXXXXXXXLRETQTRMLKFT 486 KCGVL+ LRETQTRMLKFT Sbjct: 357 KCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFT 390